Gene Pden_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0198 
Symbol 
ID4578836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp181335 
End bp182495 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content67% 
IMG OID639767515 
Productbutyryl-CoA dehydrogenase 
Protein accessionYP_914010 
Protein GI119382954 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.286709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG ACCCCGAAAC GCTTGCGCAA TTCCTCGAGA CCCTGGACCG CTTCGTGCGC 
GAACGCCTGA TCCCGAACGA AGAGCGGGTG GCCGATGGCG ACGCGATCCC GCCCGAACTG
GTGCAGGAGA TCCGCGAGAT GGGCCTGTTC GGCATGTCGA TCCCCGAGGA ACATGGCGGC
ATCGGCCTGA CCATGGCCGA AGAGGTGCAG GCCGCGCTGG TCCTGGGCCA GGCCTCACCG
GTGTTCCGCT CGCTGGTGGG CACGAATAAC GGCATCGGCT CTCAGGGGAT CATCATCGAC
GGCACGCCCG AGCAGAAGGC GCATTACCTG CCACAGCTGG CCTCGGGCGA GATGATCGCC
TCTTTCGCGC TGACCGAGCC TGATGCCGGG TCGGACGCGG GCTCGCTGCG CTGTTCGGCG
CGGCTGGACG GCGATCACTA TGTCCTGAAC GGGACCAAGC GGTTCATCAC CAACGCGCCC
CATGCCGGGC TGTTCACCGT CTTCGCCCGC ACCGATCCCG ACAGCAAGTC GGCCGCCGGC
GTCACCGCCT TCCTGGTCGA GGCCGGCACC CCCGGCCTGC ATCTGGGGCC CAGGGACCGC
AAGATGGGCC AGAAGGGATC GCATACCTGC GATGTCATCC TGGAAGATTG CCGCGTCCCG
GCAAGTGCGA TCATCGGCGG CCCCGACAGG CTGGGCCAGG GCTTCAAGAC CGCGATGAAG
GTGCTGGACC GGGGCCGGCT GCACATCTCG GCGGTCTGCG TGGGCGCGGC GGAACGGCTG
ATCCGCGACA GCCTGGCCTA TGCGATGGAG CGCAGGCAGT TCGGCGAGCC CATCGCCGAA
AAGCAGCTGG TGCAGGCGAT GCTGGCCGAC AGCCGCGCCG AGGCCTATGC CGCCCGCTGC
ATGATCGAGG AAACCGCCCG GCGCAAGGAT GCCGGCCTGA GCGTCTCGAC CGAGGCGGCC
TGCTGCAAGA TGTATGCCAG CGAGATGGTC GGCCGCGTGG CCGACCGCGC GGTGCAGATC
CATGGAGGGG CGGGCTACAT GGCCGAATAT GCGGTCGAAC GCTTCTATCG CGACGTGCGG
CTGTTCCGCA TCTATGAAGG CACGACCCAG ATCCAGCAGC TGGTGATCGC CCGCAACATG
ATCCGCGAGG CCAGCGGCTG A
 
Protein sequence
MSLDPETLAQ FLETLDRFVR ERLIPNEERV ADGDAIPPEL VQEIREMGLF GMSIPEEHGG 
IGLTMAEEVQ AALVLGQASP VFRSLVGTNN GIGSQGIIID GTPEQKAHYL PQLASGEMIA
SFALTEPDAG SDAGSLRCSA RLDGDHYVLN GTKRFITNAP HAGLFTVFAR TDPDSKSAAG
VTAFLVEAGT PGLHLGPRDR KMGQKGSHTC DVILEDCRVP ASAIIGGPDR LGQGFKTAMK
VLDRGRLHIS AVCVGAAERL IRDSLAYAME RRQFGEPIAE KQLVQAMLAD SRAEAYAARC
MIEETARRKD AGLSVSTEAA CCKMYASEMV GRVADRAVQI HGGAGYMAEY AVERFYRDVR
LFRIYEGTTQ IQQLVIARNM IREASG