Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2548 |
Symbol | |
ID | 6410210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2753871 |
End bp | 2754998 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642712426 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_001991536 |
Protein GI | 192290931 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.314153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTGA ACGAACTGCA GACCCAGATC CGCGACACCG CCCGCGACTT CGCGCGTGAG CGGCTCGCCC CGACTGCGGC GGCGCGCGAT GCCGCGCACG CCTTTCCGCG CGCCGAACTG ACCGAAATGG GCCAGCTCGG CTTTCTCGGC ATGCTGGTGC CGGAAGCCTA TGGCGGCTCT GAGACCGGCA TGGTGGCCTA TACGCTTGCG CTGGAGGAGA TTGCGGCGGG CGACGGCGCG TGCTCGACCA TCGTCAGCGT GCATTCCTCC GTGGGCTGCA TGCCGATCCT GAAATTCGGC ACCGACGAGC AGAAGCAGCG CTTCCTGCCG AAGCTTGCGA GCGGCGAGTG GATCGGCGGC TTTGCGCTGA CCGAGCCGCA GGCCGGCTCC GATGCCTCGA ACCTGCGGAC CACCGCGCGC CGCGACGGCG ATCACTACGT CATCAACGGC GCCAAGCAGT TCATCACCTC GGGGCAGAAC GGCCAGCTGA TCATCCTGTT CGCCGTCACC GATCCGTCGG CCGGCAAGAA GGGCATCACC GCCTTCATCG TGCCGACCGA TACGCCCGGC TACGAGGTGG TGCGGGTCGA GGACAAGCTT GGCCAGCATT CGTCCGACAC TTGCCAGCTC GCCTTCAACG ACATGCGGAT TCCGGCCGAC CTCCGGCTCG GCGCCGAAGG CGAGGGGCTG AAGATCGCGC TGTCGAACCT CGAAGGCGGC CGGATCGGCA TCGCGTCGCA GGCGGTCGGC ATGGCGCGCG CCGCGTTCGA AGCGGCCCGC GACTACGCGC GCGACCGCGT CACCTTCGGC AAGCCGATCA TCGAGCATCA GGCTGTGGCG TTCCGGCTCG CCGACATGGC GACCCGCATC GCGGCCGCGC GGCAGATGGT GCTGCATGCC GCGAGCCTGC GCGAAGCCGG GCTGCCGTGC CTGACCGAAG CCTCGATGGC CAAGCTGTTC GCCTCCGAGA CCGCCGAGGC GGTGTGCTCG TCGGCGATCC AGACGCTCGG CGGCTACGGT TACTTGAAGG ACTTCCCGGT CGAGCGGATC TATCGCGACG TCCGCGTCTG CCAGATCTAC GAAGGCACCA GCGACGTCCA GCGCATCGTG ATCGCGCGCA ATCTGTAA
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Protein sequence | MILNELQTQI RDTARDFARE RLAPTAAARD AAHAFPRAEL TEMGQLGFLG MLVPEAYGGS ETGMVAYTLA LEEIAAGDGA CSTIVSVHSS VGCMPILKFG TDEQKQRFLP KLASGEWIGG FALTEPQAGS DASNLRTTAR RDGDHYVING AKQFITSGQN GQLIILFAVT DPSAGKKGIT AFIVPTDTPG YEVVRVEDKL GQHSSDTCQL AFNDMRIPAD LRLGAEGEGL KIALSNLEGG RIGIASQAVG MARAAFEAAR DYARDRVTFG KPIIEHQAVA FRLADMATRI AAARQMVLHA ASLREAGLPC LTEASMAKLF ASETAEAVCS SAIQTLGGYG YLKDFPVERI YRDVRVCQIY EGTSDVQRIV IARNL
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