Gene Rpal_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2548 
Symbol 
ID6410210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2753871 
End bp2754998 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content68% 
IMG OID642712426 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_001991536 
Protein GI192290931 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.314153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTGA ACGAACTGCA GACCCAGATC CGCGACACCG CCCGCGACTT CGCGCGTGAG 
CGGCTCGCCC CGACTGCGGC GGCGCGCGAT GCCGCGCACG CCTTTCCGCG CGCCGAACTG
ACCGAAATGG GCCAGCTCGG CTTTCTCGGC ATGCTGGTGC CGGAAGCCTA TGGCGGCTCT
GAGACCGGCA TGGTGGCCTA TACGCTTGCG CTGGAGGAGA TTGCGGCGGG CGACGGCGCG
TGCTCGACCA TCGTCAGCGT GCATTCCTCC GTGGGCTGCA TGCCGATCCT GAAATTCGGC
ACCGACGAGC AGAAGCAGCG CTTCCTGCCG AAGCTTGCGA GCGGCGAGTG GATCGGCGGC
TTTGCGCTGA CCGAGCCGCA GGCCGGCTCC GATGCCTCGA ACCTGCGGAC CACCGCGCGC
CGCGACGGCG ATCACTACGT CATCAACGGC GCCAAGCAGT TCATCACCTC GGGGCAGAAC
GGCCAGCTGA TCATCCTGTT CGCCGTCACC GATCCGTCGG CCGGCAAGAA GGGCATCACC
GCCTTCATCG TGCCGACCGA TACGCCCGGC TACGAGGTGG TGCGGGTCGA GGACAAGCTT
GGCCAGCATT CGTCCGACAC TTGCCAGCTC GCCTTCAACG ACATGCGGAT TCCGGCCGAC
CTCCGGCTCG GCGCCGAAGG CGAGGGGCTG AAGATCGCGC TGTCGAACCT CGAAGGCGGC
CGGATCGGCA TCGCGTCGCA GGCGGTCGGC ATGGCGCGCG CCGCGTTCGA AGCGGCCCGC
GACTACGCGC GCGACCGCGT CACCTTCGGC AAGCCGATCA TCGAGCATCA GGCTGTGGCG
TTCCGGCTCG CCGACATGGC GACCCGCATC GCGGCCGCGC GGCAGATGGT GCTGCATGCC
GCGAGCCTGC GCGAAGCCGG GCTGCCGTGC CTGACCGAAG CCTCGATGGC CAAGCTGTTC
GCCTCCGAGA CCGCCGAGGC GGTGTGCTCG TCGGCGATCC AGACGCTCGG CGGCTACGGT
TACTTGAAGG ACTTCCCGGT CGAGCGGATC TATCGCGACG TCCGCGTCTG CCAGATCTAC
GAAGGCACCA GCGACGTCCA GCGCATCGTG ATCGCGCGCA ATCTGTAA
 
Protein sequence
MILNELQTQI RDTARDFARE RLAPTAAARD AAHAFPRAEL TEMGQLGFLG MLVPEAYGGS 
ETGMVAYTLA LEEIAAGDGA CSTIVSVHSS VGCMPILKFG TDEQKQRFLP KLASGEWIGG
FALTEPQAGS DASNLRTTAR RDGDHYVING AKQFITSGQN GQLIILFAVT DPSAGKKGIT
AFIVPTDTPG YEVVRVEDKL GQHSSDTCQL AFNDMRIPAD LRLGAEGEGL KIALSNLEGG
RIGIASQAVG MARAAFEAAR DYARDRVTFG KPIIEHQAVA FRLADMATRI AAARQMVLHA
ASLREAGLPC LTEASMAKLF ASETAEAVCS SAIQTLGGYG YLKDFPVERI YRDVRVCQIY
EGTSDVQRIV IARNL