Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0124 |
Symbol | |
ID | 6287790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 143431 |
End bp | 144561 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642623695 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_001897719 |
Protein GI | 187927232 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGA CCCAAGAGCA AGAGATGATT CGCGACGCCA TCCGCACCTT CGTGCGCGAG GCGATCGCGC CGCATGCAGC CGCGTGGGAC CGCGATGCGA CGTTCCCGAA AGACGTGCAC CGCCAACTCG GCGAGCTTGG GGCCTATGGC GTGGCCGTGC CGGAAGAACT CGGCGGGGCT GGGCTCGACT ACCTGTCGCT GGCGCTGATC CTGGAAGAAA TTGCTGCCGG CGACGGCGGT ACCTCCACCG TCATCAGCGT GAACAACTGC CCTGTGTGCA GCATGCTGAT GGCGTTTGCG AACGACGCGC AGAAGCAGCA GTGGCTTGTG CCGCTGGCGC GCGGCGAGAT GCTCGGCGCG TTCTGCCTGA CCGAGCCGCA TGTCGGCTCC GATGCATCGG CGCTGCGCAC CACGGCCGTG CGGGATGGCG ACCACTGGGT CCTCAACGGC GTGAAGCAGT TCATCACCAG CGGCAAGCAT GCCGACGTGG CGATCGTCAT GGCCGTGACC GACAAGACCG CAGGCAAGCG CGGCATCAGC GCGTTCCTGG TGCCGACCAA CACACCGGGC TACATCGTCG CGCGGCTCGA AGACAAGCTT GGCCAGCATT CGTCCGACAC GGCGCAGATC GTGTTCGAAG ACTGCCGCAT CCCCGCCGAT TGCCTGCTGG GCGAAGAAGG CGCGGGCTAC AAGATGGCGC TGTCCGGGCT GGAAGGCGGG CGCATCGGCA TTGCCGCGCA GAGCGTGGGC ATGGCGCGTG CGGCCTTTGA AGCCGCGCTG GCATACGCCA AGGAGCGCGA AAGCTTTGGC CAGCCGCTGT TTGCGCACCA GGCCGTGCAG TTTCGGCTGG CAGAGATGGC GACGCGCGTG GATGTGGCGC GGCAGATGGT CTGGCATGCC GCCAGCCTGA AAGACGCCGG GCTGCCGTGC CTGAAAGAGG CGGCCATGGC CAAGCTCAAC GCCAGCGAGA TGGCCGAGCG CGTGTGCTCC GATGCCATCC AGGTCTTTGG CGGTTACGGC TATGTCAGCG ACTTCCCGGT GGAGCGCATC TACCGCGACG TGCGCGTGTG CCAGATCTAC GAAGGCACGA GCGATATCCA GAAAATCTTG ATCGCCCGCG CGCTGGCGTA G
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Protein sequence | MLLTQEQEMI RDAIRTFVRE AIAPHAAAWD RDATFPKDVH RQLGELGAYG VAVPEELGGA GLDYLSLALI LEEIAAGDGG TSTVISVNNC PVCSMLMAFA NDAQKQQWLV PLARGEMLGA FCLTEPHVGS DASALRTTAV RDGDHWVLNG VKQFITSGKH ADVAIVMAVT DKTAGKRGIS AFLVPTNTPG YIVARLEDKL GQHSSDTAQI VFEDCRIPAD CLLGEEGAGY KMALSGLEGG RIGIAAQSVG MARAAFEAAL AYAKERESFG QPLFAHQAVQ FRLAEMATRV DVARQMVWHA ASLKDAGLPC LKEAAMAKLN ASEMAERVCS DAIQVFGGYG YVSDFPVERI YRDVRVCQIY EGTSDIQKIL IARALA
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