Gene PputGB1_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2436 
Symbol 
ID5870225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2726003 
End bp2727154 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content64% 
IMG OID641547559 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001668671 
Protein GI167033440 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACC TGGAACTGAG CGAAGAACAA GTCATGATCC GCGACATGGC CCGGGACTTT 
GCCCGTGGCG AAATCGCCCC GCATGCCCAG GCCTGGGAAA AGGCCGGCTG GATCGATGAT
GGCGTGGTGC GCAAAATGGG CGAACTGGGC CTGCTGGGCA TGGTGGTGCC AGAGGACTTC
GGCGGCAGTT ACACCGACTA CGTGGCCTAC GCCCTGGCCG TGGAAGAAAT TGCCGCGGGC
TGCGGCGCCA CCGGGGCAAT GATGAGCATC CACAACTCGG TAGGCTGCGG CCCGCTGCTG
GCCTATGGCA CGGCTGAACA GCAACAGCAA TGGCTGCCAC GGCTGGCCAG CGGCGAGGTG
ATCGGTTGCT TCTGCCTGAC CGAGCCGCAG GCCGGCTCCG AAGCGCACAA CCTGCGCACC
CGCGCCGAGC TGGTGGATGG CCAGTGGGTG ATCAACGGCG CCAAGCAGTT CGTCAGCAAC
GCCCGCCGTG CCGGTTTGGC CATCGTTTTC GCAGTGACCG ACCCGGAGCT GGGCAAGAAA
GGCCTGTCGG CGTTTTTGGT GCCCACCGAC AACCCTGGGT TCAAGGTTGA CCGCAGCGAG
CACAAGATGG GTATCCGCGC TTCCGACACC TGCGCGGTCA CCTTCGACAA CTGCCGCATC
CCTGCCGCCA ACCTGCTGGG TGAGCGTGGA AAGGGGCTGG CCATTGCCCT GTCCAACCTC
GAAGGCGGCC GTATCGGCAT TGCCGCCCAG GCCTTGGGCA TTGCCCGCGC TGCATTCGAG
GCCGCGCTAG TCTACTCACG TGACCGCGTG CAGTTCGGCA AGCCGATCAA CGAACACCAG
AGCATCGCCA ACCTGCTGGC CGACATGCAG GTACAGGTGA ACGCCGCACG TTTGCTGATC
CTGCATGCCG CGCGCCTGCG CAGCGCCGGC AAGCCGTGCC TTTCGGAAGC GTCACAGGCC
AAGCTGTTCG CTTCGGAAAT GGCCGAGCGG GTGTGTTCGA TGGCGATCCA GGTACATGGT
GGCTATGGCT ACCTGGAAGA TTACCCGGTG GAGCGCTATT ACCGGGATGC GCGGATTACC
CAGATCTATG AAGGGTCGAG CGAGATCCAG CGCATGCTGA TTGCGCGCGA GCTGAAGCAC
TATCCCCTGT AA
 
Protein sequence
MQDLELSEEQ VMIRDMARDF ARGEIAPHAQ AWEKAGWIDD GVVRKMGELG LLGMVVPEDF 
GGSYTDYVAY ALAVEEIAAG CGATGAMMSI HNSVGCGPLL AYGTAEQQQQ WLPRLASGEV
IGCFCLTEPQ AGSEAHNLRT RAELVDGQWV INGAKQFVSN ARRAGLAIVF AVTDPELGKK
GLSAFLVPTD NPGFKVDRSE HKMGIRASDT CAVTFDNCRI PAANLLGERG KGLAIALSNL
EGGRIGIAAQ ALGIARAAFE AALVYSRDRV QFGKPINEHQ SIANLLADMQ VQVNAARLLI
LHAARLRSAG KPCLSEASQA KLFASEMAER VCSMAIQVHG GYGYLEDYPV ERYYRDARIT
QIYEGSSEIQ RMLIARELKH YPL