Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2436 |
Symbol | |
ID | 5870225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2726003 |
End bp | 2727154 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547559 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001668671 |
Protein GI | 167033440 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACC TGGAACTGAG CGAAGAACAA GTCATGATCC GCGACATGGC CCGGGACTTT GCCCGTGGCG AAATCGCCCC GCATGCCCAG GCCTGGGAAA AGGCCGGCTG GATCGATGAT GGCGTGGTGC GCAAAATGGG CGAACTGGGC CTGCTGGGCA TGGTGGTGCC AGAGGACTTC GGCGGCAGTT ACACCGACTA CGTGGCCTAC GCCCTGGCCG TGGAAGAAAT TGCCGCGGGC TGCGGCGCCA CCGGGGCAAT GATGAGCATC CACAACTCGG TAGGCTGCGG CCCGCTGCTG GCCTATGGCA CGGCTGAACA GCAACAGCAA TGGCTGCCAC GGCTGGCCAG CGGCGAGGTG ATCGGTTGCT TCTGCCTGAC CGAGCCGCAG GCCGGCTCCG AAGCGCACAA CCTGCGCACC CGCGCCGAGC TGGTGGATGG CCAGTGGGTG ATCAACGGCG CCAAGCAGTT CGTCAGCAAC GCCCGCCGTG CCGGTTTGGC CATCGTTTTC GCAGTGACCG ACCCGGAGCT GGGCAAGAAA GGCCTGTCGG CGTTTTTGGT GCCCACCGAC AACCCTGGGT TCAAGGTTGA CCGCAGCGAG CACAAGATGG GTATCCGCGC TTCCGACACC TGCGCGGTCA CCTTCGACAA CTGCCGCATC CCTGCCGCCA ACCTGCTGGG TGAGCGTGGA AAGGGGCTGG CCATTGCCCT GTCCAACCTC GAAGGCGGCC GTATCGGCAT TGCCGCCCAG GCCTTGGGCA TTGCCCGCGC TGCATTCGAG GCCGCGCTAG TCTACTCACG TGACCGCGTG CAGTTCGGCA AGCCGATCAA CGAACACCAG AGCATCGCCA ACCTGCTGGC CGACATGCAG GTACAGGTGA ACGCCGCACG TTTGCTGATC CTGCATGCCG CGCGCCTGCG CAGCGCCGGC AAGCCGTGCC TTTCGGAAGC GTCACAGGCC AAGCTGTTCG CTTCGGAAAT GGCCGAGCGG GTGTGTTCGA TGGCGATCCA GGTACATGGT GGCTATGGCT ACCTGGAAGA TTACCCGGTG GAGCGCTATT ACCGGGATGC GCGGATTACC CAGATCTATG AAGGGTCGAG CGAGATCCAG CGCATGCTGA TTGCGCGCGA GCTGAAGCAC TATCCCCTGT AA
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Protein sequence | MQDLELSEEQ VMIRDMARDF ARGEIAPHAQ AWEKAGWIDD GVVRKMGELG LLGMVVPEDF GGSYTDYVAY ALAVEEIAAG CGATGAMMSI HNSVGCGPLL AYGTAEQQQQ WLPRLASGEV IGCFCLTEPQ AGSEAHNLRT RAELVDGQWV INGAKQFVSN ARRAGLAIVF AVTDPELGKK GLSAFLVPTD NPGFKVDRSE HKMGIRASDT CAVTFDNCRI PAANLLGERG KGLAIALSNL EGGRIGIAAQ ALGIARAAFE AALVYSRDRV QFGKPINEHQ SIANLLADMQ VQVNAARLLI LHAARLRSAG KPCLSEASQA KLFASEMAER VCSMAIQVHG GYGYLEDYPV ERYYRDARIT QIYEGSSEIQ RMLIARELKH YPL
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