| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0428 |
|---|
| Symbol | |
|---|
| ID | 4057164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 438926 |
|---|
| End bp | 440068 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641229438 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_603900 |
|---|
| Protein GI | 94984536 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.871589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.2576 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCA CGCTGCCCGA GGACCTGCGC GATATGCAGG CGACCGTCCG TGACTTCATG
CTCAACGTGG TGGAGGCGCG CGCGCACGAG ATCGAGGAAA CGAACCGCGT GCCCCCCGAA
CTGCTGCGTC AAGCCGCCGA GCTGGGTCTT TTCGGCCTGA GCATTCCCGA GGAGTACGGC
GGCGTCAGAC TGGGGATGCT GGGCCGCTGC GCGGTGTACG AGGCGATGGG CGAGGGACAC
ATGGGTTTTG GCGGCGTCAT CAGCGCGCAT GCCTCGATCG GCACCAGCGG GCTGGTGAAG
CTGGGCACAG AGGAGCAAAA ACGGCGCTTC CTGCCGCGCA TGGCAAGCGG CGAGTGCATC
GCGGGCTTTG CCATCACCGA GCCGTCGAGC GGGTCGGACG CGGCCAACAT CCGGACCAAG
GCCGAGAAAC GCGGCGACGT GTACGTGTTA AACGGCACCA AGCACTACAT CTCCAATGCG
CCGATTGCCG GGCTGCTCAC CGTCATCGCG ATCACCGATC CCTCACAGGG CACGCGCGGG
ATGAGTGCCT TTCTGGTCGA GCCGCAGAGC ACGCCCGGCG TCTCGATCGG CAAGATCGAC
GAGAAGATGG GCCAGAAGGG GGCGCTCTCC TCTGAGGTGA TTTTTCAGGA CGCGGAGATC
CCGGCAGCGA ACCTGCTCGG CCCCGAGAAC CTCGGCTACC GCGAGGCGCT CGGTATCCTG
ACCAACGGGC GGGTGGGGAT TGCCGCGCGC TCGACCGGCG CAATGCAGCG GCTGCTTGAC
CTCTCGGTCG CACATGCCAA GACCCGCGAA CAGTTCGGGC AGCCCATCGC CCAGTTTCAG
GCCGTGCAGT TCATGCTGGC CGAGATGGAG GTTGCCATCC AGACCAGTCG GCTGCTGTGG
CAGAAGGTCG CCTGGATGGT GGACCAAGGC CAGGACGTGC GCCGGATGGC CTCGGTGGCG
AAGTACCACG CGACCGAAAT GCTCTCGCAG GTGGCCGACA AGGCCGTGCA GGTTGCAGGC
GGCATGGGCT ACATGAAGGA TTCTCCCGTC GAGCGCTTCT ACCGCGACCA ACGCCTGCTG
CGCATCTACG AGGGCACCAG CGAGATTCAG AAGCTGATCA TCGCCCGGAG CCTGCTGGCG
TAG
|
|---|
| Protein sequence | MDFTLPEDLR DMQATVRDFM LNVVEARAHE IEETNRVPPE LLRQAAELGL FGLSIPEEYG
GVRLGMLGRC AVYEAMGEGH MGFGGVISAH ASIGTSGLVK LGTEEQKRRF LPRMASGECI
AGFAITEPSS GSDAANIRTK AEKRGDVYVL NGTKHYISNA PIAGLLTVIA ITDPSQGTRG
MSAFLVEPQS TPGVSIGKID EKMGQKGALS SEVIFQDAEI PAANLLGPEN LGYREALGIL
TNGRVGIAAR STGAMQRLLD LSVAHAKTRE QFGQPIAQFQ AVQFMLAEME VAIQTSRLLW
QKVAWMVDQG QDVRRMASVA KYHATEMLSQ VADKAVQVAG GMGYMKDSPV ERFYRDQRLL
RIYEGTSEIQ KLIIARSLLA
|
|---|
| |