More than 300 homologs were found in PanDaTox collection
for query gene Rpic_4539 on replicon NC_010678
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  91.43 
 
 
385 aa  728    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  88.05 
 
 
385 aa  704    Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  100 
 
 
385 aa  788    Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  89.87 
 
 
385 aa  712    Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  100 
 
 
385 aa  788    Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  76.24 
 
 
386 aa  615  1e-175  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  76.3 
 
 
386 aa  615  1e-175  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  75.52 
 
 
386 aa  612  9.999999999999999e-175  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  74.67 
 
 
386 aa  603  1.0000000000000001e-171  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  64.6 
 
 
384 aa  520  1e-146  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  64.86 
 
 
385 aa  513  1e-144  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  64.86 
 
 
385 aa  513  1e-144  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  63.31 
 
 
385 aa  503  1e-141  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  64.34 
 
 
383 aa  502  1e-141  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  62.02 
 
 
384 aa  498  1e-140  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  61.44 
 
 
386 aa  488  1e-137  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  61.24 
 
 
384 aa  487  1e-136  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  61.66 
 
 
384 aa  487  1e-136  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  61.24 
 
 
384 aa  487  1e-136  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  61.14 
 
 
384 aa  486  1e-136  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  60.36 
 
 
383 aa  485  1e-136  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  61.56 
 
 
380 aa  483  1e-135  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  60.88 
 
 
382 aa  470  1.0000000000000001e-131  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  59.64 
 
 
388 aa  457  1e-127  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  58.29 
 
 
382 aa  451  1.0000000000000001e-126  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  51.82 
 
 
418 aa  403  1e-111  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  52.47 
 
 
429 aa  403  1e-111  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  51.3 
 
 
387 aa  404  1e-111  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  52.07 
 
 
398 aa  398  9.999999999999999e-111  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  52.47 
 
 
390 aa  395  1e-109  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  52.21 
 
 
384 aa  397  1e-109  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  50.26 
 
 
394 aa  388  1e-106  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  52.83 
 
 
395 aa  384  1e-105  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  50.66 
 
 
390 aa  384  1e-105  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  51.68 
 
 
385 aa  384  1e-105  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
389 aa  381  1e-104  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  49.48 
 
 
404 aa  377  1e-103  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  50.39 
 
 
388 aa  377  1e-103  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  50.4 
 
 
395 aa  372  1e-102  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  48.96 
 
 
392 aa  369  1e-101  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  48.69 
 
 
394 aa  366  1e-100  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  48.96 
 
 
391 aa  362  6e-99  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  48.96 
 
 
391 aa  362  6e-99  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  48.96 
 
 
391 aa  362  6e-99  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  43.01 
 
 
386 aa  323  4e-87  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  44.15 
 
 
388 aa  320  3e-86  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  43.73 
 
 
380 aa  315  9.999999999999999e-85  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  41.22 
 
 
381 aa  284  2.0000000000000002e-75  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  41.22 
 
 
381 aa  283  5.000000000000001e-75  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  41.22 
 
 
381 aa  283  5.000000000000001e-75  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_011891  A2cp1_4272  acyl-CoA dehydrogenase domain protein  44.73 
 
 
580 aa  282  7.000000000000001e-75  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  39.58 
 
 
381 aa  282  7.000000000000001e-75  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  41.22 
 
 
381 aa  281  9e-75  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  41.22 
 
 
381 aa  281  9e-75  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  41.22 
 
 
381 aa  281  1e-74  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  41.22 
 
 
381 aa  281  1e-74  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  41.22 
 
 
381 aa  281  1e-74  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  41.22 
 
 
381 aa  281  2e-74  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_011145  AnaeK_4249  acyl-CoA dehydrogenase domain protein  44.44 
 
 
580 aa  281  2e-74  Anaeromyxobacter sp. K  Bacteria  normal  0.808927  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  41.6 
 
 
389 aa  281  2e-74  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  42.47 
 
 
386 aa  280  4e-74  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  40.96 
 
 
381 aa  279  5e-74  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  40.69 
 
 
381 aa  278  1e-73  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  39.36 
 
 
379 aa  276  3e-73  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  41.49 
 
 
380 aa  277  3e-73  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_4118  Acyl-CoA dehydrogenase  43.59 
 
 
580 aa  276  3e-73  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.846783  n/a   
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  38.42 
 
 
388 aa  276  4e-73  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  39.42 
 
 
379 aa  276  4e-73  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  38.74 
 
 
386 aa  275  9e-73  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  41.22 
 
 
380 aa  274  2.0000000000000002e-72  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  38.46 
 
 
379 aa  273  4.0000000000000004e-72  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  41.13 
 
 
385 aa  272  7e-72  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  38.16 
 
 
388 aa  272  8.000000000000001e-72  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  40.96 
 
 
376 aa  270  2e-71  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  39.47 
 
 
376 aa  271  2e-71  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  39.47 
 
 
376 aa  271  2e-71  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  38.73 
 
 
379 aa  270  2.9999999999999997e-71  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  39.47 
 
 
376 aa  270  4e-71  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  38.26 
 
 
389 aa  269  5e-71  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
375 aa  269  5.9999999999999995e-71  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  39.47 
 
 
381 aa  269  5.9999999999999995e-71  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  39.47 
 
 
376 aa  269  5.9999999999999995e-71  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
382 aa  269  5.9999999999999995e-71  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  39.47 
 
 
376 aa  269  5.9999999999999995e-71  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  39.63 
 
 
400 aa  269  5.9999999999999995e-71  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  39.52 
 
 
390 aa  269  5.9999999999999995e-71  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  39.79 
 
 
382 aa  269  7e-71  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_013457  VEA_001547  branched-chain acyl-CoA dehydrogenase  39.52 
 
 
384 aa  269  7e-71  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1340  butyryl-CoA dehydrogenase  41.58 
 
 
385 aa  269  7e-71  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.92296  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  39.47 
 
 
381 aa  269  7e-71  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_007333  Tfu_1777  putative acyl-CoA dehydrogenase  41.4 
 
 
383 aa  268  1e-70  Thermobifida fusca YX  Bacteria  normal  0.0345355  n/a   
 
 
-
 
NC_009675  Anae109_4277  acyl-CoA dehydrogenase domain-containing protein  43.3 
 
 
579 aa  268  1e-70  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.943677  normal 
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  38.95 
 
 
381 aa  267  2e-70  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  39.21 
 
 
376 aa  266  2.9999999999999995e-70  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6335  acyl-CoA dehydrogenase domain protein  38.12 
 
 
386 aa  266  5e-70  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0389315  normal  0.725662 
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  41.58 
 
 
385 aa  266  5e-70  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3093  acyl-CoA dehydrogenase-like  39.1 
 
 
382 aa  266  5.999999999999999e-70  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  38.65 
 
 
383 aa  265  1e-69  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  38.95 
 
 
388 aa  264  2e-69  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  37.08 
 
 
380 aa  263  3e-69  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
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