More than 300 homologs were found in PanDaTox collection
for query gene Franean1_3930 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
385 aa  770    Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  79.58 
 
 
395 aa  614  1e-175  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  66.93 
 
 
418 aa  502  1e-141  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  62.99 
 
 
384 aa  489  1e-137  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  61.01 
 
 
390 aa  444  1.0000000000000001e-124  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  58.66 
 
 
392 aa  443  1e-123  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  59.84 
 
 
391 aa  439  9.999999999999999e-123  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  59.84 
 
 
391 aa  439  9.999999999999999e-123  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  59.84 
 
 
391 aa  439  9.999999999999999e-123  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  58.07 
 
 
404 aa  435  1e-121  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  56.8 
 
 
380 aa  432  1e-120  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  57.75 
 
 
384 aa  433  1e-120  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  56.27 
 
 
386 aa  426  1e-118  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  53.81 
 
 
384 aa  418  1e-116  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  55.61 
 
 
384 aa  419  1e-116  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  57.94 
 
 
394 aa  417  9.999999999999999e-116  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  55.61 
 
 
384 aa  416  9.999999999999999e-116  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  53.95 
 
 
383 aa  411  1e-114  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  51.85 
 
 
384 aa  402  1e-111  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  54.81 
 
 
383 aa  404  1e-111  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  51.85 
 
 
384 aa  401  1e-111  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  53.74 
 
 
385 aa  401  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  55 
 
 
382 aa  399  9.999999999999999e-111  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  54.38 
 
 
385 aa  399  9.999999999999999e-111  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  52.51 
 
 
385 aa  398  1e-109  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  53.58 
 
 
385 aa  395  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  52.51 
 
 
385 aa  397  1e-109  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  54.01 
 
 
385 aa  393  1e-108  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  53.79 
 
 
382 aa  392  1e-108  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  53.97 
 
 
386 aa  393  1e-108  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  54.47 
 
 
388 aa  390  1e-107  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  53.58 
 
 
386 aa  387  1e-106  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  51.68 
 
 
385 aa  384  1e-105  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  51.68 
 
 
385 aa  384  1e-105  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  52.88 
 
 
395 aa  381  1e-104  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  52.39 
 
 
390 aa  377  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  52.25 
 
 
386 aa  372  1e-102  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  50.8 
 
 
429 aa  369  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  50.13 
 
 
398 aa  367  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  51.19 
 
 
386 aa  367  1e-100  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  50.27 
 
 
388 aa  367  1e-100  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  49.08 
 
 
389 aa  360  2e-98  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  47.87 
 
 
394 aa  348  6e-95  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  48.13 
 
 
387 aa  346  4e-94  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  43.42 
 
 
388 aa  322  8e-87  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  44.09 
 
 
386 aa  312  6.999999999999999e-84  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  44.59 
 
 
380 aa  308  1.0000000000000001e-82  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  42.08 
 
 
388 aa  293  3e-78  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  41.78 
 
 
388 aa  286  4e-76  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  39.9 
 
 
389 aa  275  1.0000000000000001e-72  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  43.6 
 
 
377 aa  273  4.0000000000000004e-72  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0730  acyl-CoA dehydrogenase domain protein  38.46 
 
 
381 aa  269  5e-71  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0882  acyl-CoA dehydrogenase domain-containing protein  41.01 
 
 
381 aa  266  4e-70  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.000390729  normal  0.405813 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  42.86 
 
 
376 aa  265  8e-70  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007517  Gmet_1710  Acyl-CoA dehydrogenase-like  40.21 
 
 
386 aa  265  8.999999999999999e-70  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.671564 
 
 
-
 
NC_011146  Gbem_2826  acyl-CoA dehydrogenase domain protein  40.73 
 
 
385 aa  265  8.999999999999999e-70  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  40.43 
 
 
381 aa  265  1e-69  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  40.6 
 
 
379 aa  265  1e-69  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4179  acyl-CoA dehydrogenase domain protein  40.48 
 
 
381 aa  264  2e-69  Burkholderia phytofirmans PsJN  Bacteria  normal  0.011291  hitchhiker  0.000381045 
 
 
-
 
NC_012918  GM21_1386  acyl-CoA dehydrogenase domain protein  40.73 
 
 
385 aa  264  2e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  42.33 
 
 
376 aa  264  2e-69  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  42.37 
 
 
389 aa  264  2e-69  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  39.84 
 
 
379 aa  264  2e-69  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  42.9 
 
 
386 aa  264  2e-69  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  40.42 
 
 
382 aa  261  1e-68  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  41.38 
 
 
389 aa  261  1e-68  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  41.07 
 
 
383 aa  262  1e-68  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2500  acyl-CoA dehydrogenase domain-containing protein  42.62 
 
 
380 aa  260  2e-68  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0488  butyryl-CoA dehydrogenase  38.42 
 
 
379 aa  261  2e-68  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00678793  n/a   
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  40.31 
 
 
394 aa  260  4e-68  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  39.58 
 
 
379 aa  258  9e-68  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  38.16 
 
 
380 aa  258  1e-67  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2336  acyl-CoA dehydrogenase domain-containing protein  44.35 
 
 
385 aa  258  1e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5712  putative acyl-CoA dehydrogenase  42.01 
 
 
386 aa  257  2e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2181  acyl-CoA dehydrogenase domain-containing protein  42.27 
 
 
386 aa  258  2e-67  Pseudomonas putida GB-1  Bacteria  normal  0.326272  normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  41.26 
 
 
376 aa  258  2e-67  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_65820  putative acyl-CoA dehydrogenase  42.01 
 
 
386 aa  257  2e-67  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  39.68 
 
 
381 aa  257  3e-67  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  39.73 
 
 
379 aa  257  3e-67  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_013739  Cwoe_1659  acyl-CoA dehydrogenase domain protein  38.89 
 
 
390 aa  256  4e-67  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.487392 
 
 
-
 
NC_009512  Pput_2038  acyl-CoA dehydrogenase domain-containing protein  42.01 
 
 
386 aa  256  4e-67  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  39.58 
 
 
379 aa  256  6e-67  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  41.27 
 
 
375 aa  255  7e-67  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  39.05 
 
 
379 aa  255  8e-67  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  41.01 
 
 
375 aa  255  9e-67  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  39.31 
 
 
379 aa  255  1.0000000000000001e-66  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1569  acyl-CoA dehydrogenase domain protein  42.71 
 
 
389 aa  254  1.0000000000000001e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  0.881248  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  39.05 
 
 
379 aa  254  1.0000000000000001e-66  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  41.05 
 
 
379 aa  254  1.0000000000000001e-66  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  39.05 
 
 
379 aa  254  1.0000000000000001e-66  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3725  acyl-CoA dehydrogenase domain-containing protein  41.75 
 
 
386 aa  254  2.0000000000000002e-66  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  36.68 
 
 
380 aa  254  2.0000000000000002e-66  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  38.32 
 
 
390 aa  254  2.0000000000000002e-66  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  39.05 
 
 
379 aa  254  2.0000000000000002e-66  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  39.05 
 
 
379 aa  254  2.0000000000000002e-66  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_009720  Xaut_4666  acyl-CoA dehydrogenase domain-containing protein  40.74 
 
 
375 aa  254  2.0000000000000002e-66  Xanthobacter autotrophicus Py2  Bacteria  normal  0.815528  normal  0.395379 
 
 
-
 
NC_009668  Oant_3106  acyl-CoA dehydrogenase domain-containing protein  41.27 
 
 
375 aa  254  2.0000000000000002e-66  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.332334  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  39.31 
 
 
379 aa  254  2.0000000000000002e-66  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  38.79 
 
 
400 aa  254  2.0000000000000002e-66  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_011145  AnaeK_4249  acyl-CoA dehydrogenase domain protein  42.7 
 
 
580 aa  254  2.0000000000000002e-66  Anaeromyxobacter sp. K  Bacteria  normal  0.808927  n/a   
 
 
-
 
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