| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3010 |
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| Symbol | |
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| ID | 4082954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3150547 |
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| End bp | 3151710 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638011395 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_618048 |
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| Protein GI | 103488487 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.157219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACG CAGGCATGGA CGCCGACATC TACGGCGCCT TTATCGAGCA GCTGCAACGC
TATGTCCGCG AACGGCTGAT CCCCGCCGAG GACCAGCTCG AAGAACTCGG CCGCGTTCCC
GACGATATCC TCGCCGAAAT GCGCGACATG GGGCTGTTCG GCGTGACGAT GCCCGAAGAA
TATGGCGGCG CGGGCATGAA CATCAGCCAA TATGTCGGCT TCATTCGCGA GCTCGCCTAT
GCCGCGCCCG CCTATCGCTC GATCGTGTCG ATCAACATCG GCATGGTGTG CAAATCGATC
CTCGGGTTCG GCACCGAGCA GCAGAAAGCG CATTGGCTGC CCAAGCTGGC GAGCGGCAGC
ATCGCCGCCT TCGGCCTCAC CGAGCCCGAC AGCGGCTCGG ACAGCGCGGC GATGAAGACG
CGCGCGGTGC CGAGCGGCAA CGGCTATGTG CTCAATGGCA CCAAACGCTA TATCACCAAC
GCGCCCTTTG CCGACGTCAT CCTCGTCATG GCGCGCACCA ATGCCGAGGC GCTGCCAAAG
AATGCGCATG TCAGCGCTTT CCTCGTGCCC AGAGACGCCC CCGGCGTCTC GATCGGCAAG
CCCGACGGCA AGATGGGCCA GGCCGGATCG CAGATCGCCG ACGTGATCCT CGAGGATGTG
CATGTCGACG GCGACGCGCT GCTCGGCGGC GAGGAAGGCA TCGGCTTTCG CGCCGCGATG
CAGAGCCTCG ACAACGGGCG CCTGTCGGTC GCCGCGGCGA GCGTCGGCTA TGCCAAAAGG
ATGCTCGACA CGGGGCTTCG ATATGCGATG GAACGCAAGG CGTTCGGCGA ACCCATCGCC
AGTTTCCAGC TGATCCAGGC GATGCTCGCC GACAGCAAGG CCGAAATCTA CGCCGCCGAC
TGCATGCTCA ACGACGCCTG CGCGCGCGCC GACCGCGGCG AAAAGATCCT TGTCGAAGCC
GCCGCGACCA AGATGTTCGC GAGTGAAATG TGCGGCCGCG TCGCCGACCG CGTGGTGCAG
ATTCATGGCG GCGCGGGCTA TCTCAAGGAA TATCTCGCCG AACGCTTCTA TCGCGACTGT
CGCATTTACC GCATTTATGA AGGGACGACG CAGATACAGC AGCTGGTGAT CGCGAAGAAC
ATGATCCGCG ATTATGCGGG CTAG
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| Protein sequence | MTNAGMDADI YGAFIEQLQR YVRERLIPAE DQLEELGRVP DDILAEMRDM GLFGVTMPEE
YGGAGMNISQ YVGFIRELAY AAPAYRSIVS INIGMVCKSI LGFGTEQQKA HWLPKLASGS
IAAFGLTEPD SGSDSAAMKT RAVPSGNGYV LNGTKRYITN APFADVILVM ARTNAEALPK
NAHVSAFLVP RDAPGVSIGK PDGKMGQAGS QIADVILEDV HVDGDALLGG EEGIGFRAAM
QSLDNGRLSV AAASVGYAKR MLDTGLRYAM ERKAFGEPIA SFQLIQAMLA DSKAEIYAAD
CMLNDACARA DRGEKILVEA AATKMFASEM CGRVADRVVQ IHGGAGYLKE YLAERFYRDC
RIYRIYEGTT QIQQLVIAKN MIRDYAG
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