More than 300 homologs were found in PanDaTox collection
for query gene Pnap_2129 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  89.3 
 
 
386 aa  712    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  100 
 
 
386 aa  785    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  76.56 
 
 
385 aa  622  1e-177  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  77.08 
 
 
385 aa  623  1e-177  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  75.52 
 
 
385 aa  612  9.999999999999999e-175  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  75.52 
 
 
385 aa  612  9.999999999999999e-175  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  74.55 
 
 
386 aa  607  9.999999999999999e-173  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  74.67 
 
 
386 aa  605  9.999999999999999e-173  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  75 
 
 
385 aa  602  1.0000000000000001e-171  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  62.18 
 
 
384 aa  499  1e-140  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  63.12 
 
 
380 aa  497  1e-139  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  62.89 
 
 
385 aa  497  1e-139  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  62.89 
 
 
385 aa  496  1e-139  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  62.63 
 
 
385 aa  496  1e-139  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  61.66 
 
 
383 aa  484  1e-136  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  61.86 
 
 
384 aa  484  1e-135  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  60.36 
 
 
384 aa  471  1e-132  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  59.07 
 
 
383 aa  471  1e-132  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  60.36 
 
 
384 aa  471  1.0000000000000001e-131  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  57.84 
 
 
386 aa  466  9.999999999999999e-131  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  57.99 
 
 
384 aa  458  9.999999999999999e-129  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  57.99 
 
 
384 aa  458  9.999999999999999e-129  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  59.11 
 
 
388 aa  447  1.0000000000000001e-124  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  56.96 
 
 
382 aa  444  1e-123  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  54.64 
 
 
382 aa  426  1e-118  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  53.14 
 
 
418 aa  410  1e-113  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  53.97 
 
 
385 aa  393  1e-108  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  49.35 
 
 
398 aa  388  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  50.26 
 
 
429 aa  390  1e-107  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  50.91 
 
 
390 aa  385  1e-106  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  50.91 
 
 
395 aa  385  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  52.08 
 
 
384 aa  383  1e-105  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  49.87 
 
 
387 aa  378  1e-104  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  50.77 
 
 
404 aa  376  1e-103  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  48.71 
 
 
388 aa  375  1e-103  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  48.45 
 
 
394 aa  376  1e-103  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  50.91 
 
 
392 aa  374  1e-102  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  50.39 
 
 
395 aa  373  1e-102  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  50.39 
 
 
391 aa  363  3e-99  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  50.39 
 
 
391 aa  363  3e-99  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  50.39 
 
 
391 aa  363  3e-99  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  48.96 
 
 
390 aa  362  7.0000000000000005e-99  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  50.66 
 
 
394 aa  361  1e-98  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  45.41 
 
 
389 aa  352  8e-96  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  44.06 
 
 
386 aa  319  3.9999999999999996e-86  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  43.58 
 
 
388 aa  317  2e-85  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  42.11 
 
 
380 aa  300  2e-80  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  42.11 
 
 
389 aa  284  2.0000000000000002e-75  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  41.41 
 
 
383 aa  281  2e-74  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  41.82 
 
 
388 aa  280  2e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  41.92 
 
 
386 aa  279  7e-74  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  39.26 
 
 
379 aa  275  1.0000000000000001e-72  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_007333  Tfu_1777  putative acyl-CoA dehydrogenase  42.48 
 
 
383 aa  274  2.0000000000000002e-72  Thermobifida fusca YX  Bacteria  normal  0.0345355  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  39.95 
 
 
379 aa  273  3e-72  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  38.18 
 
 
379 aa  273  3e-72  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_007925  RPC_3093  acyl-CoA dehydrogenase-like  40.92 
 
 
382 aa  272  6e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
375 aa  271  1e-71  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  39.69 
 
 
375 aa  271  2e-71  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  38.6 
 
 
381 aa  270  2.9999999999999997e-71  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6770  acyl-CoA dehydrogenase domain protein  39.95 
 
 
390 aa  269  5.9999999999999995e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.210456  normal  0.358603 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  37.98 
 
 
388 aa  269  5.9999999999999995e-71  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_002947  PP_3492  acyl-CoA dehydrogenase domain-containing protein  40.87 
 
 
383 aa  269  7e-71  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2885  acyl-CoA dehydrogenase domain-containing protein  40.87 
 
 
383 aa  269  7e-71  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  39.95 
 
 
381 aa  268  1e-70  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2279  acyl-CoA dehydrogenase domain-containing protein  40.6 
 
 
383 aa  268  1e-70  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  39.95 
 
 
381 aa  268  1e-70  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_010322  PputGB1_2436  acyl-CoA dehydrogenase domain-containing protein  40.6 
 
 
383 aa  268  1e-70  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  41.56 
 
 
400 aa  268  1e-70  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  39.95 
 
 
381 aa  267  2.9999999999999995e-70  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_013457  VEA_001547  branched-chain acyl-CoA dehydrogenase  41.02 
 
 
384 aa  266  2.9999999999999995e-70  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  39.27 
 
 
381 aa  267  2.9999999999999995e-70  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  39.69 
 
 
381 aa  266  4e-70  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  39.69 
 
 
381 aa  266  4e-70  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  39.69 
 
 
381 aa  266  5.999999999999999e-70  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  39.69 
 
 
381 aa  266  5.999999999999999e-70  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  39.69 
 
 
381 aa  266  5.999999999999999e-70  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  39.69 
 
 
381 aa  265  8.999999999999999e-70  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  39.52 
 
 
375 aa  264  2e-69  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  38.74 
 
 
381 aa  264  2e-69  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  38.36 
 
 
386 aa  264  2e-69  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  39.52 
 
 
375 aa  264  2e-69  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  38.08 
 
 
388 aa  263  3e-69  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_013595  Sros_1345  acyl-CoA dehydrogenase, C-terminal domain protein  40.36 
 
 
387 aa  263  3e-69  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  40 
 
 
375 aa  264  3e-69  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  39.4 
 
 
385 aa  263  3e-69  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_013510  Tcur_4115  acyl-CoA dehydrogenase domain protein  38.22 
 
 
390 aa  262  6.999999999999999e-69  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2589  acyl-CoA dehydrogenase domain protein  38.22 
 
 
390 aa  262  6.999999999999999e-69  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000683478  n/a   
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  39.73 
 
 
385 aa  262  6.999999999999999e-69  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  37.08 
 
 
380 aa  261  1e-68  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3281  acyl-CoA dehydrogenase-like  38.92 
 
 
395 aa  261  1e-68  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  39.27 
 
 
380 aa  261  2e-68  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  36.94 
 
 
389 aa  261  2e-68  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  39.43 
 
 
375 aa  260  3e-68  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1647  acyl-CoA dehydrogenase  37.08 
 
 
385 aa  260  3e-68  Thermobifida fusca YX  Bacteria  normal  0.658516  n/a   
 
 
-
 
NC_011891  A2cp1_4272  acyl-CoA dehydrogenase domain protein  41.09 
 
 
580 aa  260  3e-68  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  38.12 
 
 
386 aa  260  3e-68  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  39.69 
 
 
375 aa  260  3e-68  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_009943  Dole_2500  acyl-CoA dehydrogenase domain-containing protein  38.5 
 
 
380 aa  259  5.0000000000000005e-68  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0858  butyryl-CoA dehydrogenase  39.3 
 
 
380 aa  259  5.0000000000000005e-68  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661231  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  38.74 
 
 
380 aa  259  5.0000000000000005e-68  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>