Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0488 |
Symbol | |
ID | 4281573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 574113 |
End bp | 575252 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638137373 |
Product | butyryl-CoA dehydrogenase |
Protein accession | YP_753194 |
Protein GI | 114566040 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00678793 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTTA TGCTTTCGGA AGAACAGGAG CTAATCAGGT CAAATGCCCG CGAGTTCGCT TTGAAGTATA TCGAACCCGT GGCCACAAAA ATCGATCAAG AAAGTCGCCA TCCGGTCGAA GTATTTGATA AACTGGCGGA ACTTGACATG ATGGGCATTT CCTACCCAAG TGAATATGGG GGCGGCGGAG CGGAATTCCT TACTACCATG ATCGTTACCG AAGAATTGGC CCGCTCCTGC GCTACTACCG GTTTTCTTCA TGGATACAGC TACGGCCTGA TCGGACACCC CATACTTACT TTTGGCAATG AAGAACAGAA GCAAAAATGG ATGCCCGGCC TGGCCGCCGG AAAGCTTGTA GGTTCCTTTG CATTGACTGA ACCCGGAGCG GGAACGGATG TCAGCTCGGC CACCACTACA GCGGTAAAAA AAGGTGATAA ATATATTTTG AACGGGACCA AAACTTTCAT CACCAACGCA ATTCTTGCTG ACGTTTTCGT GGTTTTCGCC TATACCGACC GCTCGGCCGG TGCCAAAGGA ATGAGCTGCT TCCTAGTTCC CCAGGGAAGC TCGGGACTTA ATGTAGGCCA ACATTTTGAT AAGATGGGGG TTCGCGGCTC CCAGACCTCT GAAGTCGTTT TCAAAGACTG TGTGGTAGCG GCTGATTGCA TGCTGGGCAA GGAGGGAGAT GGTTTTAAGA TCGCCATGAG TGCGCTTGAT GTTGGTCGTA TAGGTATTGC TGCCATGTCC ACCGGCATCA CCCAGGGCTG CCTGGATGAA TCAATCAAGT ATTCGAAGGA GCGGGTTCAG TTTAAGAAAC CCATTGCCAG TCAACAAGCT ATTCAATGGT TTATCGCCAA CATGGCCACC GATATAGATG CTGCCCGTTT CCTGTATATG AACGCCGCCT TTATAAAAGA CCAGGGCAAA CCATTTAGCG TAGCTGCCTC CAAAGCCAAG TTGTTCTGTT CCGAATGTGC GGCCCGGCAT ACCACTAAAG CAGTGCAAAT TCAGGGCGGA TATGGCTTCA TGAAGGGAGC GAAGGTTGAA CGCTTTTATC GCGATGTCAA GTTAACCGAG ATTGGCGAAG GTACGTCCGA AGCTCAACGC ATGATTATTG CAGGCTCGGT TCTTCGTTAA
|
Protein sequence | MNFMLSEEQE LIRSNAREFA LKYIEPVATK IDQESRHPVE VFDKLAELDM MGISYPSEYG GGGAEFLTTM IVTEELARSC ATTGFLHGYS YGLIGHPILT FGNEEQKQKW MPGLAAGKLV GSFALTEPGA GTDVSSATTT AVKKGDKYIL NGTKTFITNA ILADVFVVFA YTDRSAGAKG MSCFLVPQGS SGLNVGQHFD KMGVRGSQTS EVVFKDCVVA ADCMLGKEGD GFKIAMSALD VGRIGIAAMS TGITQGCLDE SIKYSKERVQ FKKPIASQQA IQWFIANMAT DIDAARFLYM NAAFIKDQGK PFSVAASKAK LFCSECAARH TTKAVQIQGG YGFMKGAKVE RFYRDVKLTE IGEGTSEAQR MIIAGSVLR
|
| |