More than 300 homologs were found in PanDaTox collection
for query gene Rmet_1816 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  100 
 
 
429 aa  886    Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  78.59 
 
 
390 aa  622  1e-177  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  75.98 
 
 
388 aa  615  1e-175  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  70.16 
 
 
398 aa  550  1e-155  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  64.21 
 
 
395 aa  509  1e-143  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  62.57 
 
 
384 aa  499  1e-140  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  64.99 
 
 
389 aa  494  1e-139  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  62.5 
 
 
384 aa  490  1e-137  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  62.5 
 
 
384 aa  490  1e-137  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  60.47 
 
 
384 aa  475  1e-133  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  59.95 
 
 
383 aa  477  1e-133  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  59.32 
 
 
384 aa  474  1e-132  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  59.32 
 
 
384 aa  474  1e-132  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  58.64 
 
 
385 aa  468  1.0000000000000001e-131  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  58.38 
 
 
385 aa  462  1e-129  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  58.38 
 
 
385 aa  463  1e-129  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  58.49 
 
 
382 aa  452  1.0000000000000001e-126  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  58.58 
 
 
382 aa  451  1e-125  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  55.97 
 
 
380 aa  439  9.999999999999999e-123  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  55.18 
 
 
386 aa  432  1e-120  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  57.59 
 
 
388 aa  429  1e-119  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  53.46 
 
 
383 aa  426  1e-118  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  54.81 
 
 
385 aa  411  1e-113  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  53.87 
 
 
386 aa  411  1e-113  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  51.68 
 
 
386 aa  406  1.0000000000000001e-112  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  52.47 
 
 
385 aa  403  1e-111  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  52.47 
 
 
385 aa  403  1e-111  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  53.66 
 
 
386 aa  400  9.999999999999999e-111  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  52.22 
 
 
385 aa  392  1e-108  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  50.26 
 
 
386 aa  390  1e-107  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  51.96 
 
 
385 aa  391  1e-107  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  52.12 
 
 
418 aa  381  1e-104  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  50.8 
 
 
385 aa  369  1e-101  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  47.14 
 
 
394 aa  368  1e-100  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  49.34 
 
 
395 aa  363  2e-99  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  46.34 
 
 
387 aa  354  1e-96  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  46.74 
 
 
384 aa  345  6e-94  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  48.78 
 
 
390 aa  345  7e-94  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  47.45 
 
 
392 aa  342  1e-92  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  46.93 
 
 
404 aa  340  2.9999999999999998e-92  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  47.17 
 
 
391 aa  330  3e-89  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  47.17 
 
 
391 aa  330  3e-89  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  47.17 
 
 
391 aa  330  3e-89  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  46.34 
 
 
394 aa  324  2e-87  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  41.36 
 
 
386 aa  304  2.0000000000000002e-81  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  42.05 
 
 
388 aa  303  5.000000000000001e-81  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  44.06 
 
 
380 aa  299  7e-80  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  43.25 
 
 
379 aa  280  4e-74  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  43.25 
 
 
379 aa  280  4e-74  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  42.58 
 
 
389 aa  278  2e-73  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  40.33 
 
 
380 aa  277  3e-73  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  41.14 
 
 
379 aa  275  1.0000000000000001e-72  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  42.55 
 
 
376 aa  275  1.0000000000000001e-72  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  40.49 
 
 
381 aa  274  2.0000000000000002e-72  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  42.27 
 
 
386 aa  273  4.0000000000000004e-72  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  40.77 
 
 
379 aa  271  2e-71  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  42.02 
 
 
376 aa  271  2e-71  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  40.92 
 
 
381 aa  271  2e-71  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  39.84 
 
 
382 aa  270  2.9999999999999997e-71  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4115  acyl-CoA dehydrogenase domain protein  41.95 
 
 
390 aa  270  4e-71  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2589  acyl-CoA dehydrogenase domain protein  41.95 
 
 
390 aa  270  4e-71  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000683478  n/a   
 
 
-
 
NC_013131  Caci_4530  acyl-CoA dehydrogenase domain protein  39.63 
 
 
389 aa  269  7e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335652  normal  0.412983 
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  42.05 
 
 
388 aa  269  7e-71  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  39.78 
 
 
382 aa  269  8e-71  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  40.22 
 
 
377 aa  268  1e-70  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_3002  acyl-CoA dehydrogenase domain protein  39.67 
 
 
388 aa  268  2e-70  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  37.8 
 
 
388 aa  268  2e-70  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_011831  Cagg_0202  acyl-CoA dehydrogenase domain protein  42.86 
 
 
382 aa  267  2e-70  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221874  normal 
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  40.68 
 
 
386 aa  267  2e-70  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  38.96 
 
 
381 aa  267  2.9999999999999995e-70  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  38.69 
 
 
379 aa  266  4e-70  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
376 aa  266  5e-70  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  40.72 
 
 
400 aa  266  5e-70  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_013411  GYMC61_1327  acyl-CoA dehydrogenase domain protein  41.83 
 
 
399 aa  266  5.999999999999999e-70  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  39.08 
 
 
379 aa  266  5.999999999999999e-70  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_008781  Pnap_0459  acyl-CoA dehydrogenase domain-containing protein  40.71 
 
 
376 aa  266  5.999999999999999e-70  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  38.07 
 
 
387 aa  265  8e-70  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  39.24 
 
 
383 aa  265  8e-70  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  39.45 
 
 
390 aa  265  8.999999999999999e-70  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  40.93 
 
 
376 aa  265  8.999999999999999e-70  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  42.82 
 
 
379 aa  265  1e-69  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  40.71 
 
 
375 aa  265  2e-69  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  37.7 
 
 
386 aa  265  2e-69  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_007973  Rmet_0108  acyl-CoA dehydrogenase-like protein  40.74 
 
 
376 aa  264  2e-69  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  39.08 
 
 
379 aa  263  3e-69  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2500  acyl-CoA dehydrogenase domain-containing protein  43.05 
 
 
380 aa  264  3e-69  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  40.32 
 
 
376 aa  263  4e-69  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  40.32 
 
 
381 aa  263  4e-69  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  40.05 
 
 
376 aa  263  4.999999999999999e-69  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1647  acyl-CoA dehydrogenase  37.96 
 
 
385 aa  263  4.999999999999999e-69  Thermobifida fusca YX  Bacteria  normal  0.658516  n/a   
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  39.67 
 
 
379 aa  263  4.999999999999999e-69  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  38.54 
 
 
379 aa  263  4.999999999999999e-69  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  40.05 
 
 
376 aa  263  4.999999999999999e-69  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  40.32 
 
 
381 aa  263  4.999999999999999e-69  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  40.32 
 
 
381 aa  263  6e-69  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
BN001308  ANIA_00824  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_1G14850)  39.18 
 
 
439 aa  262  6.999999999999999e-69  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  39.45 
 
 
379 aa  262  6.999999999999999e-69  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  40.05 
 
 
376 aa  262  6.999999999999999e-69  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  40.05 
 
 
376 aa  262  6.999999999999999e-69  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  40.05 
 
 
376 aa  262  8.999999999999999e-69  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
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