| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4179 |
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| Symbol | |
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| ID | 6277476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 223167 |
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| End bp | 224312 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615278 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001887931 |
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| Protein GI | 187918900 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.011291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000381045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTCT CAGACACGCA CCAGCAGATT CGCGAAACCA CGCGCCGTTT CGCGCAGGAA
GTGATTCGTC CGATCACGGA AGAACTGGAT CGCGACGAGC GCTTTCCGGC CGAGATCTAC
ACGCAGATGG GCGAGTTGGG CCTGTTCGGC ATCACCGTTC CGGAAGCTTT CGGTGGCGCC
GGCCTCGATG TCACGGCGTA CGCGCTGGTG ATGGAGGAAC TGTCGCGCGG TTACGCGTCG
GTGGCGGATC AATGCGGTCT GCTCGAACTG GTCGGCACAC TGCTTTCGGT GCACGGCACC
GACTCGCAGC GCGCGAAATA CATGCAGCCG CTGCTGCGCG CGAAGCTGCG TCCCGCGTAC
TGCATCACCG AAGCGGACGC CGGCACCGAC GTGTCGGGCA TCCGCACGAC TGCGATGCGC
ACGCCGGACG GCTGGGAGCT CAGCGGCGCG AAACTGTGGA TTCACAACGC GCCGGTCGCG
GACGTCGCGT TCGTGCTCGC GCGCACCGAT CCCGCCGCGG GCCGGCGCGG CATGAGCATC
TTTATCGTGG ACTGCGCGCT CGCCGGTGTG TCGAAAGGCG CGAAGGAACA CAAGATGGGC
CAGCGCGCGT CGCAGGTCGG GGAACTGCAT TTCGATCGCG TTAAGCTGCC GCAAGACGCG
CTGCTCGGCC AGGAAGGCCG CGGCTTTCAC ATCATGATGA GCGTGCTCGA CAAGGGGCGC
GTGGGCATTG CGGCACTCGC CGTCGGCATC GCGCAGGCGG GCCTCGAAGC CGCACTCGAT
TACGCGCAGA CACGCAAGCA GTTCGGCAGC CATATCGCCG AATTCCAGGG CATTCAGTGG
ATGCTTGCGG ACATGGCGAC CGACATCCAG GCCGCGCGAC TGCTTGTGCA CGATGCGGCG
GAACGGCTCG AAGCGGGTGA ACGCGCGAGC ATTGCGTGTT CGATGGCGAA GTGTTTCGCG
GGCGATACCG CCGTCAAGCA TAGCGCGAAC GCCGTGCAGA TTTTCGGCGG CAGTGGCTAC
ATTCGCGGCT ATGAAGTCGA GCGCCTGTAT CGCGACGCGA AGATCACGCA GATCTACGAA
GGCACCAACC AGATTCAACG CACTATCGTC GCGCGCGATC TGATCGCCAA TGGAGCCACG
CTATGA
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| Protein sequence | MKLSDTHQQI RETTRRFAQE VIRPITEELD RDERFPAEIY TQMGELGLFG ITVPEAFGGA
GLDVTAYALV MEELSRGYAS VADQCGLLEL VGTLLSVHGT DSQRAKYMQP LLRAKLRPAY
CITEADAGTD VSGIRTTAMR TPDGWELSGA KLWIHNAPVA DVAFVLARTD PAAGRRGMSI
FIVDCALAGV SKGAKEHKMG QRASQVGELH FDRVKLPQDA LLGQEGRGFH IMMSVLDKGR
VGIAALAVGI AQAGLEAALD YAQTRKQFGS HIAEFQGIQW MLADMATDIQ AARLLVHDAA
ERLEAGERAS IACSMAKCFA GDTAVKHSAN AVQIFGGSGY IRGYEVERLY RDAKITQIYE
GTNQIQRTIV ARDLIANGAT L
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