Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2181 |
Symbol | |
ID | 5869970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2432145 |
End bp | 2433305 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547306 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001668418 |
Protein GI | 167033187 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.326272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCC AACTGACCCA AGAACAAGAA ATGTTGGTGG AAGCGGTACG CAGCTTTGTC GCCAAAGAGC TGCTGCCCCA TGAGGAAGCG GTGGACCGCG CCGATGCCGT GTCACCCGAG CTGGCCGCAC AGATCCGCGG CAAGGCCATC GCCGCTGGGT TCTATGCCTT CAACATGCCC GAGGAAGTCG GTGGCGGCGG CCTGGACTAC TTGTCTCAGG CGTTGATCGA GCGTGAGCTG TCCAAGGTGT CCTGGGCCCT GCATGTATTT GTCGCACGGC CGTCGAAAAT TCTCATGGCC TGCAAGGATG AGCAGATCAA CGACTACCTG CTGCCCTGCG TGCAGGGCGA GAAAACAGAC TGTTTCGCCC TCACCGAACC GGGCGCCGGC TCCGATGCCA ACGCCATCAA GACCCGCGCC GTGCGCCAGG GCGATGACTT TGTCATCAAC GGCAGCAAGC ACTTCATCAG CCACGCCGGC CACGCCGATT TCGCCATTGT CTTCGCGGTC ACCGACACCT ACGAGCACAA CGGGCGCAAG CGCAATGCGG TCACGGCGTT GCTGGTGGAC CGTGGTACGC CGGGCATGAC CATCCGCCGT GGCCCCAAAT GCGTCAGCAA CCGTGGCTAC CACACCTACG AACTGTTCTT CGACGACTGC CGGGTGCCGG CCAGCAAGGT ACTGGGCGAG GTTGGCAAGG GCTGGGAAGT GGCCAACGCC TGGCTTACCG CAGGCCGGGT GATGGTCGCC GCCAACTGCG TGGGCCAGGC CCAGCGCGCA CTCGACCTGT CGCTGCAATG GGCCGCCGAC CGTAAGCAGT TCGGCCAGGC CATTGGCAGC TACCAGGGTG TGTCGTTCAA GTTGGCCGAC ATGGCCACGC AGATTCGCGC CGCCGAGATG CTCACCCTGC ACACCGCCTG GAAGATGGAC CAGGGCAGCA TGACCGATGG CGAGGCCGGC ATGGCCAAGC TGTTTGCCAG CGAAGTGCTG GGCAAGGTGG CCGACGAAGC CGTGCAGATA TTTGGCGGTA TGGGCCTTAT GGACGAAGGG CCGGTCGAGC GCATCTGGCG CAATGCGCGT ATCGAACGCA TCTGGGAGGG CACCTCGGAA ATCCAGCGGC ACATCATCGC CCGCGAACTG CTGCGCCCGC TGCTGCGCTG A
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Protein sequence | MNFQLTQEQE MLVEAVRSFV AKELLPHEEA VDRADAVSPE LAAQIRGKAI AAGFYAFNMP EEVGGGGLDY LSQALIEREL SKVSWALHVF VARPSKILMA CKDEQINDYL LPCVQGEKTD CFALTEPGAG SDANAIKTRA VRQGDDFVIN GSKHFISHAG HADFAIVFAV TDTYEHNGRK RNAVTALLVD RGTPGMTIRR GPKCVSNRGY HTYELFFDDC RVPASKVLGE VGKGWEVANA WLTAGRVMVA ANCVGQAQRA LDLSLQWAAD RKQFGQAIGS YQGVSFKLAD MATQIRAAEM LTLHTAWKMD QGSMTDGEAG MAKLFASEVL GKVADEAVQI FGGMGLMDEG PVERIWRNAR IERIWEGTSE IQRHIIAREL LRPLLR
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