| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001547 |
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| Symbol | |
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| ID | 8559860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1750456 |
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| End bp | 1751610 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646409217 |
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| Product | branched-chain acyl-CoA dehydrogenase |
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| Protein accession | YP_003288695 |
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| Protein GI | 262396842 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03207] cyclohexanecarboxyl-CoA dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTG AACTTAATGA AGATCAACGT GCATTTGCCG ATACCGCTCA GCAATTTGCC
GATGAGCGTT TAGCGCCGAT GGCGGCGGAG TGGGATGAAA AACAGATCTT CCCCAAAGAT
GTATTGAGAG AGGCTGGAGA GTTAGGCTTC CTGAGCCTCT ACACTCCAGA AGCGCAAGGT
GGCCTAGGGC TGAGTCGCTT AGATGCGTCA ATTATCTTTG AACAACTGGC CATGGGATGT
ACGTCTACTA CGGCGTTTAT GACGATTCAC AACATGGTCA GTTGGATGAT AGCCAGTTTT
GCTACTGATG AAGCCAAAAC GCAGTTCTGT CCGAAGTTAG TTACGGGGGA GTGGTTAGGC
TCCTATTGCT TAACCGAGCC CAACGCAGGA TCAGACGCCG CTGCACTGAC CACTTCCGCT
ACAAAAAAGG GGGATAAGTA TGTGCTCAAC GGTGGCAAAA CCTTTATCTC TGGCGCAGGA
GAGACAGATG TTTTGGTCGT GATGGCGAGA ACTGGAGAAG CGGGTGCCAA AGGCGTGTCT
GCATTTGTTG TTCCTGCTCA AGCAGGTGGT ATCAGCTATG GGCGCAAAGA ACCCAAAATG
GGTTGGAATA GCCAACCAAC ACGAGCGGTT ACTTTTGAAA ATGTCGTTGT TCCAGCTAGC
CATTTACTGG GCGAAGAAGG GCAAGGTTTT GTCTTTGCGA TGAAAGGGCT TGATGGAGGG
CGTATAAATA TTGCGACCTG CTCCGTCGGT ACGGCTCAAC AGGCCCTTAA TCAGGCGGCA
TGGTATATTC AAGAACGTAA GCAGTTCGGC AAGCCGCTTG CGCAGTTTCA AGCCTTACAA
TTCAAATTGG CAGACATGGC GACAGAGCTA GTGGCTGCGC GGCAGTTGGT GCGCTATGCC
GCCAGTAAGC TCGACCGAAA TGACCCAGAT GCCACTGCTT ATTGCGCGAT GGCAAAACGG
TTCGCAACCG ATGTGGGCTT TCAGGTTTGC GACCAAGCGC TGCAGCTTTA TGGCGGCTAT
GGTTATATCA AAGAGTATCC AATGGAACGT CATTTCAGAG ATGTGCGTGT GCATCAAATT
CTGGAGGGAA CGAACGAAAT TATGCGTTTA ATCATCGCGC GCCGTTTGCT CTCTGAGGAG
TCGACCTTGC TGTAG
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| Protein sequence | MDFELNEDQR AFADTAQQFA DERLAPMAAE WDEKQIFPKD VLREAGELGF LSLYTPEAQG
GLGLSRLDAS IIFEQLAMGC TSTTAFMTIH NMVSWMIASF ATDEAKTQFC PKLVTGEWLG
SYCLTEPNAG SDAAALTTSA TKKGDKYVLN GGKTFISGAG ETDVLVVMAR TGEAGAKGVS
AFVVPAQAGG ISYGRKEPKM GWNSQPTRAV TFENVVVPAS HLLGEEGQGF VFAMKGLDGG
RINIATCSVG TAQQALNQAA WYIQERKQFG KPLAQFQALQ FKLADMATEL VAARQLVRYA
ASKLDRNDPD ATAYCAMAKR FATDVGFQVC DQALQLYGGY GYIKEYPMER HFRDVRVHQI
LEGTNEIMRL IIARRLLSEE STLL
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