| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4277 |
|---|
| Symbol | |
|---|
| ID | 5377335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 5017097 |
|---|
| End bp | 5018836 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640845805 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001381439 |
|---|
| Protein GI | 153007114 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.943677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA AGACCGCGAG CTTCATGCGC TCGCTCTGCA TGGGCGACAT CGAAGAGGAG
CTGTTGCTTC CGTTCCCGGA GCCCAAGGCC GGCGAGAAGC AGACCCTCGC GGCGGTGCTC
CAGACCCTGA AGTCCATGCT CGGCTCGCGC GAGCGCGACT TCCGCGCCTG GGATCGCGCC
GGCGAGATGC CGAGGGCGTT CGTGGACGAG CTCAAGGAGG CGGGCCTCTT CAGCCTCGTC
ATCCCGGAGA CGCACGGAGG GCTCGGGCTC GGCGCGACCG CCTACTCGCG CGTGATCCAG
GAGCTCGCCC GCTACGACGC GTCGGTGGCG GTGACGGTCG GCGCGCACAG CTCGATCGGC
ATGCGCGGGC TCCTCCTCTT CGGCACCGAG GAGCAGAAGG CCCGCTTCCT GCCGAAGCTC
GCGACCGGGG AGCTGATCGC CGCCTTCTGC CTCACCGAGC CCGGCGCGGG CTCCGACGCG
GCGAGCATCA AGACCACCGC GGTGCGGGAC GGCGACGACT GGGTGCTGAA CGGCGAGAAG
CTCTGGATCA CGAACGGCGG CATCGCCGAC TTCTTCACGG TCTTCGCGCG CACCTCCCTG
GACGGGCGCG GCAACATCAC CGCCTTCATC GTGACGCGCG ACCTGAAGGG CGTCTCGACG
GGACCGCACG AGGACAAGAT GGGGATCCGC GCCTCGTCCA CCACCACCGT GGTGCTCGAG
GACGTCCGCG TGCCCGCCGC CAACGTGCTC GGGGAGGTCG GCAAGGGCTT CAAGCTCGCC
ATGAAGATCC TGAACGCCGG CCGCACGGGG CTGGGCGGCG GATCGGTGGG CGGCATGAAG
CGGCTCATCG AGCTCTCCGT GCGCCAGGCG CGCGAGCGCG TCCAGTTCGG CCAGCCCATC
GCGAGCTTCG AGTCCATCCA GCAGAAGATC GGCCAGATGG TGGTGGACTG CTACGCCTCC
GAGAGCGTCG TGAACCTCGT CGCCGGCCTC GTGGACCGCG GCTTCGAGGA CTACGCGGTC
GAGGCGGCGA TCTCCAAGGT GCTCTCGAGC GAGGCGCTGT GGCGGACCGC GGACGAGGCG
CTCCAGATCG CGGCGGGCCA GGGGTACATG CGCGAGATGC CGTACGAGCT GGCGCTGCGC
GACAGCCGGA TCAACCGGAT CTTCGAGGGC ACGAACGAGA TCCTGCGGCT GTTCATCGCG
CTCACCGCGA TGAACGACGT GGCGGAGGAG CTGAAGGACC TCTCGGTCTC GATGCGCGGC
GTGTTCGCCG ATCCCATCAA GGGGTTCGGG GTGCTCTCCG ACTACGCCAA GCGGCGCGCC
CAGCTCGCCA CCGGCCTGCG GCGCGAGAAG GGCCGCTGGT CGCTGCTCCA CCCCAGCCTC
GCCGAGGAGG CGCAGCTCTT CGAGCACTCC GCGACGGCGC TCGCCGTGGC CGCCGATCGC
ATCCTGCGCA AGCACGGGAA GCGGATCATC GGCGAGCAGC TCGCGACCCG CCGGCTCGCC
GACATCATGG TGGACCTGTT CGCGCTCGCG GCGATGCTCG CCCGCGTCTC CACCGGCATC
GAGGACCGCG GAGAGGCGTC GGTGGAGATG GAGCGCCAGA TCGTCCGCAC CTTCGCGTGG
CAGGCGAAGC GGCGCGTGGA CCAGAACCTC GCCGGCATCG ACGACAACGA GGACCCCACC
GTCAAGCAGC TCGCGAAGCA CGTCCTCGAG ACTGGCAAGT ACGTCTGGGA CAACCTCTAG
|
|---|
| Protein sequence | MDKKTASFMR SLCMGDIEEE LLLPFPEPKA GEKQTLAAVL QTLKSMLGSR ERDFRAWDRA
GEMPRAFVDE LKEAGLFSLV IPETHGGLGL GATAYSRVIQ ELARYDASVA VTVGAHSSIG
MRGLLLFGTE EQKARFLPKL ATGELIAAFC LTEPGAGSDA ASIKTTAVRD GDDWVLNGEK
LWITNGGIAD FFTVFARTSL DGRGNITAFI VTRDLKGVST GPHEDKMGIR ASSTTTVVLE
DVRVPAANVL GEVGKGFKLA MKILNAGRTG LGGGSVGGMK RLIELSVRQA RERVQFGQPI
ASFESIQQKI GQMVVDCYAS ESVVNLVAGL VDRGFEDYAV EAAISKVLSS EALWRTADEA
LQIAAGQGYM REMPYELALR DSRINRIFEG TNEILRLFIA LTAMNDVAEE LKDLSVSMRG
VFADPIKGFG VLSDYAKRRA QLATGLRREK GRWSLLHPSL AEEAQLFEHS ATALAVAADR
ILRKHGKRII GEQLATRRLA DIMVDLFALA AMLARVSTGI EDRGEASVEM ERQIVRTFAW
QAKRRVDQNL AGIDDNEDPT VKQLAKHVLE TGKYVWDNL
|
|---|
| |