More than 300 homologs were found in PanDaTox collection
for query gene Smed_4814 on replicon NC_009620
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009620  Smed_4814  glucose-1-phosphate thymidylyltransferase  100 
 
 
292 aa  601  1.0000000000000001e-171  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2721  glucose-1-phosphate thymidylyltransferase  73.01 
 
 
293 aa  449  1e-125  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4721  glucose-1-phosphate thymidylyltransferase  70.24 
 
 
302 aa  438  9.999999999999999e-123  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.00249172 
 
 
-
 
NC_008254  Meso_2760  glucose-1-phosphate thymidylyltransferase  66.78 
 
 
293 aa  397  9.999999999999999e-111  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1983  glucose-1-phosphate thymidylyltransferase  63.07 
 
 
287 aa  381  1e-105  Agrobacterium vitis S4  Bacteria  normal  0.967411  n/a   
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
296 aa  382  1e-105  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  63.01 
 
 
292 aa  382  1e-105  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  63.23 
 
 
290 aa  378  1e-104  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_011989  Avi_1494  glucose-1-phosphate thymidylyltransferase  63.07 
 
 
287 aa  380  1e-104  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1181  glucose-1-phosphate thymidylyltransferase  62.11 
 
 
289 aa  379  1e-104  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.25108  normal  0.28241 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
294 aa  379  1e-104  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_009800  EcHS_A2181  glucose-1-phosphate thymidylyltransferase  61.94 
 
 
289 aa  379  1e-104  Escherichia coli HS  Bacteria  normal  0.112189  n/a   
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
292 aa  375  1e-103  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  61.81 
 
 
293 aa  376  1e-103  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  60.63 
 
 
294 aa  375  1e-103  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  62.28 
 
 
290 aa  377  1e-103  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_009379  Pnuc_0255  glucose-1-phosphate thymidylyltransferase  62.15 
 
 
309 aa  375  1e-103  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.201113  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
294 aa  377  1e-103  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
294 aa  375  1e-103  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  62.98 
 
 
289 aa  371  1e-102  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  62.72 
 
 
304 aa  371  1e-102  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_1270  glucose-1-phosphate thymidylyltransferase  61.4 
 
 
289 aa  373  1e-102  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.106852  normal  0.0645307 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  60.21 
 
 
291 aa  374  1e-102  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  60.55 
 
 
296 aa  372  1e-102  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
294 aa  373  1e-102  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  62.37 
 
 
296 aa  371  1e-102  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
292 aa  374  1e-102  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
292 aa  374  1e-102  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
292 aa  372  1e-102  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_013203  Apar_1007  glucose-1-phosphate thymidylyltransferase  61.22 
 
 
300 aa  369  1e-101  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4472  glucose-1-phosphate thymidylyltransferase  61.46 
 
 
292 aa  369  1e-101  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0455332  n/a   
 
 
-
 
NC_012892  B21_01934  hypothetical protein  64.66 
 
 
270 aa  369  1e-101  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  62.76 
 
 
292 aa  368  1e-101  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1059  glucose-1-phosphate thymidylyltransferase  63.38 
 
 
291 aa  368  1e-101  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  61.11 
 
 
287 aa  369  1e-101  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2858  glucose-1-phosphate thymidylyltransferase  61.84 
 
 
289 aa  369  1e-101  Dickeya zeae Ech1591  Bacteria  normal  0.0450568  n/a   
 
 
-
 
NC_008532  STER_1224  glucose-1-phosphate thymidyl transferase  62.28 
 
 
289 aa  369  1e-101  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1473  glucose-1-phosphate thymidylyltransferase  63.25 
 
 
287 aa  370  1e-101  Shewanella baltica OS223  Bacteria  normal  0.905305  normal  0.376761 
 
 
-
 
NC_010531  Pnec_0279  glucose-1-phosphate thymidylyltransferase  61.11 
 
 
309 aa  369  1e-101  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.643202  normal 
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  61.89 
 
 
305 aa  369  1e-101  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_012917  PC1_1299  glucose-1-phosphate thymidylyltransferase  60.9 
 
 
291 aa  368  1e-101  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  61.72 
 
 
293 aa  369  1e-101  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1283  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
295 aa  367  1e-100  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  60.14 
 
 
297 aa  365  1e-100  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
289 aa  367  1e-100  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0545  glucose-1-phosphate thymidylyltransferase, long form  62.68 
 
 
291 aa  366  1e-100  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.771831 
 
 
-
 
NC_007492  Pfl01_0702  glucose-1-phosphate thymidylyltransferase  61.03 
 
 
307 aa  367  1e-100  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00504967  normal 
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  59.45 
 
 
297 aa  364  1e-100  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  61.97 
 
 
293 aa  366  1e-100  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_013517  Sterm_2411  glucose-1-phosphate thymidylyltransferase  59.31 
 
 
290 aa  365  1e-100  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000385967  n/a   
 
 
-
 
NC_009253  Dred_3038  glucose-1-phosphate thymidylyltransferase  61.05 
 
 
292 aa  365  1e-100  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  62.54 
 
 
293 aa  367  1e-100  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007641  Rru_B0048  glucose-1-phosphate thymidylyltransferase  60.96 
 
 
294 aa  365  1e-100  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.231271  n/a   
 
 
-
 
NC_007760  Adeh_4290  glucose-1-phosphate thymidylyltransferase  61.38 
 
 
294 aa  365  1e-100  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
297 aa  366  1e-100  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  61.05 
 
 
289 aa  367  1e-100  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  62.54 
 
 
310 aa  366  1e-100  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
297 aa  365  1e-100  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
286 aa  366  1e-100  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  60 
 
 
293 aa  366  1e-100  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
293 aa  367  1e-100  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
297 aa  366  1e-100  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6726  glucose-1-phosphate thymidylyltransferase  60.48 
 
 
317 aa  366  1e-100  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  63.67 
 
 
305 aa  367  1e-100  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  60.55 
 
 
295 aa  366  1e-100  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  60.78 
 
 
286 aa  366  1e-100  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  62.54 
 
 
293 aa  367  1e-100  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3016  glucose-1-phosphate thymidylyltransferase  58.62 
 
 
289 aa  367  1e-100  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00414881  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  61.38 
 
 
293 aa  363  1e-99  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0166  glucose-1-phosphate thymidylyltransferase  62.9 
 
 
293 aa  364  1e-99  Serratia proteamaculans 568  Bacteria  normal  0.455037  normal 
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  61.38 
 
 
295 aa  363  2e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2395  glucose-1-phosphate thymidylyltransferase  59.86 
 
 
296 aa  363  2e-99  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.737045 
 
 
-
 
NC_012850  Rleg_0434  glucose-1-phosphate thymidylyltransferase  60.07 
 
 
287 aa  363  2e-99  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.824963 
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  61.72 
 
 
292 aa  363  2e-99  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  61.38 
 
 
293 aa  363  2e-99  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_011757  Mchl_4001  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
294 aa  363  2e-99  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  61.03 
 
 
293 aa  363  2e-99  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_011757  Mchl_2672  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
296 aa  362  3e-99  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00250825  normal 
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  59.31 
 
 
294 aa  362  3e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1570  dTDP-glucose pyrophosphorylase  60.48 
 
 
298 aa  362  3e-99  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  59.31 
 
 
294 aa  362  3e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  60.63 
 
 
296 aa  362  4e-99  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
312 aa  362  4e-99  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_009997  Sbal195_3029  glucose-1-phosphate thymidylyltransferase  61.84 
 
 
291 aa  362  4e-99  Shewanella baltica OS195  Bacteria  normal  normal  0.173381 
 
 
-
 
NC_009485  BBta_1073  glucose-1-phosphate thymidylyltransferase  63.96 
 
 
296 aa  362  4e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
289 aa  362  5.0000000000000005e-99  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_013204  Elen_2049  glucose-1-phosphate thymidylyltransferase  61.51 
 
 
300 aa  361  6e-99  Eggerthella lenta DSM 2243  Bacteria  normal  0.635858  normal 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  59.38 
 
 
292 aa  361  7.0000000000000005e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  59.86 
 
 
289 aa  361  7.0000000000000005e-99  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  60.21 
 
 
291 aa  361  7.0000000000000005e-99  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1760  glucose-1-phosphate thymidylyltransferase  59.04 
 
 
298 aa  361  8e-99  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0453677 
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  60 
 
 
294 aa  361  9e-99  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_013165  Shel_14400  Glucose-1-phosphate thymidylyltransferase  60.88 
 
 
300 aa  360  1e-98  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.856501  normal 
 
 
-
 
NC_007964  Nham_3052  glucose-1-phosphate thymidylyltransferase  61.81 
 
 
298 aa  360  1e-98  Nitrobacter hamburgensis X14  Bacteria  normal  0.664934  n/a   
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  58.97 
 
 
296 aa  359  2e-98  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  59.66 
 
 
305 aa  360  2e-98  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
293 aa  360  2e-98  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
297 aa  360  2e-98  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  59.45 
 
 
297 aa  359  3e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  59.66 
 
 
299 aa  359  3e-98  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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