| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4814 |
|---|
| Symbol | |
|---|
| ID | 5318629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1333634 |
|---|
| End bp | 1334512 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640776608 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_001313540 |
|---|
| Protein GI | 150376944 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGGA TCATACTTGC GGGAGGCAAC GGCACTCGGC TGTACCCGCT CACCATCGCC
ATTTCGAAGC AGATCCTGCC GGTTTATGAC AAACCGATGG TCTACTATCC GTTGAGCGTG
CTCATGCTAG CCGGTATCCG CGACATTCTC ATTATCTCGA CGGCGCGCGA CCTGCCCTGC
TTCGAAGCCC TTCTTGGTGA CGGCTCGGCC TTCGGCCTGA CCCTGTCCTA TGCCGAACAG
CCTCACCCCA ACGGGCTGGC CGAAGCATTT ATCATCGGAC GCAGTTTCAT CGGAAGCGGC
AATGTCGCAA TGATCCTCGG CGACAATATC TTCTTCGGCA ACGGCCTACC GAATGTCTGC
CGCCAGGCCG CCTCCCGGGA GAGCGGCGCC TGCGTGTTCG CCTATCGCGT CGATGATCCG
GAGCGTTACG GGGTGGTCAC CTTCGACCAG CGGACAGGCC AGGCGAAATC GATCGAAGAG
AAGCCGCTAC GGCCGAAATC CAACTGGGCA GTGACCGGCC TCTATTTCTA CGACAATGAA
GTCGTGGACA TTGCCGCTTC GATCCAGCCC TCGGCGCGTG GCGAGCTCGA GATCACCACG
GTCAACAACA TCTATCTCGA GCGCGACAGG CTCCATGTCT GTCAACTCGG TCGTGGCTTC
GCCTGGCTCG ACACCGGCAC CTACGACAGC CTGCACGATG CCTCGTCCTT CGTTCGAACA
GTCGAACGTC GCCAGGGCGT CCAGATAGCC TGTCCGGAAG AGATTGCGCT GGAAATGGGT
TGGCTTGGGC CGGAAGACGT ATTGAAGCGC TCGCGCATGC TCGGGAGCAC CCCTTACGCC
TACTATCTAC GCCGTCGCGT GGAGGAGCAT GTCGGATGA
|
|---|
| Protein sequence | MRGIILAGGN GTRLYPLTIA ISKQILPVYD KPMVYYPLSV LMLAGIRDIL IISTARDLPC
FEALLGDGSA FGLTLSYAEQ PHPNGLAEAF IIGRSFIGSG NVAMILGDNI FFGNGLPNVC
RQAASRESGA CVFAYRVDDP ERYGVVTFDQ RTGQAKSIEE KPLRPKSNWA VTGLYFYDNE
VVDIAASIQP SARGELEITT VNNIYLERDR LHVCQLGRGF AWLDTGTYDS LHDASSFVRT
VERRQGVQIA CPEEIALEMG WLGPEDVLKR SRMLGSTPYA YYLRRRVEEH VG
|
|---|
| |