| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1007 |
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| Symbol | |
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| ID | 8413879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1136610 |
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| End bp | 1137512 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022596 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_003180027 |
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| Protein GI | 257784810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGGCA TCATTCTTGC AGGAGGTAGC GGCACGAGGC TTTATCCGCT GACAACCGTT
ACGTCTAAAC AGCTTTTACC TGTTTATGAC AAGCCAATGA TTTACTATCC TCTGTCTACG
CTTATGCTGG CGGGAATTAG AGACATTCTT GTTATCTCTA CTCCTCGTGA CCTTCCAAAT
TTTGAAAAGC TTTTGGGTGA CGGATCTGAT TTTGGCATCT CTATCAGCTA TGCTGAACAA
CCTTCTCCTG ATGGATTGGC TCAGGCATTT GTTATTGGTA AAGAGTTTAT TGGCGATGAT
GCTGCAGCTC TCATTCTTGG AGATAATATC TTCTTTGGAA ATGGTCTTTC AGGACTTGTT
AGAAAAGCTG CTCAGCAGGC ACAAACTGCT GGCCGTGCTA CAGTCTTTGG TTATCACGTG
GATGATCCAG AGCGTTTTGG CGTTGTTGAG TTTGATAAGA ACTACAACGC TATTTCAATT
GAAGAAAAGC CAGCTCATCC AAAGTCTAAC TACGCAGTAA CTGGTCTCTA TTTCTATGAT
CAGCGTGTTA CTGAGCTGGT AAAGCAAGTT CAGCCAAGTG CTCGGGGTGA GTACGAGATT
ACTGATCTTA ACCGTCTGTA TCTTGAGGAC GGCACCCTTG ACGTTGTCAC TCTTGGCCGC
GGTTTTGCAT GGCTTGATAC GGGAACTATG GAGTCTCTCT TTGAGGCATC AACCTTTGTC
CGTACCGTTG AAACAGCTCA AGGTCTGCCG GTAAGCGTTC CAGAAGAGAT TGCTTTTGAG
AACGGCTGGA TTGATAGCGC AAAACTCATT GAATGTGCAG AGCGCTACGG TAAATCTGCC
TATGGTGAAC ACCTCAAGAG TGTTGCAGAA GGACGAATTC TTCCTTCTGG AAAAGGAGAG
TAA
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| Protein sequence | MKGIILAGGS GTRLYPLTTV TSKQLLPVYD KPMIYYPLST LMLAGIRDIL VISTPRDLPN
FEKLLGDGSD FGISISYAEQ PSPDGLAQAF VIGKEFIGDD AAALILGDNI FFGNGLSGLV
RKAAQQAQTA GRATVFGYHV DDPERFGVVE FDKNYNAISI EEKPAHPKSN YAVTGLYFYD
QRVTELVKQV QPSARGEYEI TDLNRLYLED GTLDVVTLGR GFAWLDTGTM ESLFEASTFV
RTVETAQGLP VSVPEEIAFE NGWIDSAKLI ECAERYGKSA YGEHLKSVAE GRILPSGKGE
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