Gene Nwi_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0545 
Symbol 
ID3676889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp611419 
End bp612294 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content60% 
IMG OID637712090 
Productglucose-1-phosphate thymidylyltransferase, long form 
Protein accessionYP_317164 
Protein GI75674743 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.771831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCA TCATTCTTGC GGGGGGGACG GGTTCCCGCC TTTACCCGGT GACGACAGTC 
GTTTCCAAGC AACTCCTGCC CGTCTTCGAC AAGCCGATGA TTTATTATCC GCTGTCGACG
CTGATGCTGG GCGGCATCCG GGAAATCATG ATTATTTCGA CACCGCAGGA CGAGCCGCTG
TTTCACCGGC TGCTCGGCGA CGGCAGTGAA ATCGGCATGC GCTTTGCCTA TGCGACGCAG
GAATCCCCGC GCGGGCTGGC GGACGCCTTC ATCGTCGGCC GCGATTTTAT CGGCTCCGAC
GCCGTCGCCC TCGTGTTAGG CGATAACATT TTCTACGGTC ACGGATTGCC TCAACTGTTA
TCATCCGCAT CCTCCCGCAA CAAGGGAGCC ACCGTCTTCG GCTATGTCGT GAACACCCCT
GAGCAGTACG GGGTCGTTGA ACTCGACGAT ACCGGGCGCG CGCGCTCGAT CGAAGAGAAG
CCGAGGCAAC CAAAATCCAA CATTGCCGTG ACCGGGCTGT ACTTTTACGA CAACGATGTT
GTCGAGATCG CGGCGGGTGT CAAGCCGTCG GCACGCGGCG AGATCGAGAT CACGGACGTC
AACAACGCCT ATCTCGAGCG CGGCGACCTC TATGTCGAAG TGCTCGGGCG CGGCTTCGCC
TGGCTGGACA CCGGGACGCA TTCCTCGCTG GTCGAGGCCA GCCACTTCGT CCAGATCCTG
GAGCAGCGCC AGGGCTTGCG CATCGCCTGC CCCGAGGAAA TCGCCCTGCG GCAAGGCTAC
ATCTCGCTTC AGGCCTTTGA GAAAGCCGCC GCGAGGAACG GGAAAAGCAG CTACGGCGAG
TATCTGAGAT CCGTTGCCCA TTCATACCAG TGTTGA
 
Protein sequence
MKGIILAGGT GSRLYPVTTV VSKQLLPVFD KPMIYYPLST LMLGGIREIM IISTPQDEPL 
FHRLLGDGSE IGMRFAYATQ ESPRGLADAF IVGRDFIGSD AVALVLGDNI FYGHGLPQLL
SSASSRNKGA TVFGYVVNTP EQYGVVELDD TGRARSIEEK PRQPKSNIAV TGLYFYDNDV
VEIAAGVKPS ARGEIEITDV NNAYLERGDL YVEVLGRGFA WLDTGTHSSL VEASHFVQIL
EQRQGLRIAC PEEIALRQGY ISLQAFEKAA ARNGKSSYGE YLRSVAHSYQ C