More than 300 homologs were found in PanDaTox collection
for query gene RSc0671 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_0563  methyl-accepting chemotaxis sensory transducer  91.03 
 
 
745 aa  1327    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2898  methyl-accepting chemotaxis sensory transducer  58.68 
 
 
754 aa  672    Acidovorax ebreus TPSY  Bacteria  normal  0.0204496  n/a   
 
 
-
 
NC_008825  Mpe_A3187  methyl-accepting chemotaxis sensory transducer  57.12 
 
 
745 aa  649    Methylibium petroleiphilum PM1  Bacteria  normal  0.484204  normal  0.234759 
 
 
-
 
NC_003295  RSc0671  putative twitching motility transmembrane protein  100 
 
 
743 aa  1474    Ralstonia solanacearum GMI1000  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_010682  Rpic_0615  methyl-accepting chemotaxis sensory transducer  91.16 
 
 
745 aa  1330    Ralstonia pickettii 12J  Bacteria  normal  0.685399  normal 
 
 
-
 
NC_008786  Veis_3018  methyl-accepting chemotaxis sensory transducer  56.69 
 
 
767 aa  679    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.238689  normal  0.701163 
 
 
-
 
NC_008752  Aave_0904  methyl-accepting chemotaxis sensory transducer  54.37 
 
 
745 aa  687    Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.405383 
 
 
-
 
NC_007347  Reut_A2620  methyl-accepting chemotaxis sensory transducer  73.08 
 
 
733 aa  1019    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1575  methyl-accepting chemotaxis sensory transducer  55.39 
 
 
749 aa  653    Delftia acidovorans SPH-1  Bacteria  normal  normal  0.114033 
 
 
-
 
NC_007908  Rfer_1374  methyl-accepting chemotaxis sensory transducer  59.48 
 
 
759 aa  652    Rhodoferax ferrireducens T118  Bacteria  normal  0.43954  n/a   
 
 
-
 
NC_007948  Bpro_1139  methyl-accepting chemotaxis sensory transducer  56.93 
 
 
692 aa  654    Polaromonas sp. JS666  Bacteria  normal  normal  0.534971 
 
 
-
 
NC_007973  Rmet_0672  methyl-accepting chemotaxis sensory transducer  76.08 
 
 
733 aa  984    Cupriavidus metallidurans CH34  Bacteria  normal  0.371682  normal  0.522662 
 
 
-
 
NC_008781  Pnap_3351  methyl-accepting chemotaxis sensory transducer  57.53 
 
 
759 aa  659    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.335724  normal 
 
 
-
 
NC_008782  Ajs_3575  methyl-accepting chemotaxis sensory transducer  58.68 
 
 
754 aa  672    Acidovorax sp. JS42  Bacteria  normal  0.946853  normal  0.162427 
 
 
-
 
NC_010524  Lcho_3968  methyl-accepting chemotaxis sensory transducer  52.33 
 
 
777 aa  629  1e-179  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0103685 
 
 
-
 
NC_012791  Vapar_4623  methyl-accepting chemotaxis sensory transducer  57.12 
 
 
770 aa  626  1e-178  Variovorax paradoxus S110  Bacteria  normal  0.408638  n/a   
 
 
-
 
NC_007298  Daro_3896  chemotaxis sensory transducer  51.32 
 
 
706 aa  597  1e-169  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2549  chemotaxis sensory transducer  43.93 
 
 
707 aa  480  1e-134  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0511  twitching motility protein PilJ  40.92 
 
 
682 aa  433  1e-120  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_05360  twitching motility protein PilJ  40.92 
 
 
682 aa  432  1e-120  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0406  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
678 aa  426  1e-118  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0475  methyl-accepting chemotaxis sensory transducer  40.15 
 
 
686 aa  429  1e-118  Pseudomonas putida W619  Bacteria  normal  0.178091  normal 
 
 
-
 
NC_011901  Tgr7_2901  putative methyl-accepting chemotaxis sensory transducer  41.51 
 
 
700 aa  417  9.999999999999999e-116  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.726182  n/a   
 
 
-
 
NC_008740  Maqu_3770  methyl-accepting chemotaxis sensory transducer  39.7 
 
 
691 aa  419  9.999999999999999e-116  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5305  chemotaxis sensory transducer  40.53 
 
 
686 aa  414  1e-114  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.115158  normal  0.281343 
 
 
-
 
NC_002947  PP_4989  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
686 aa  410  1e-113  Pseudomonas putida KT2440  Bacteria  normal  0.289293  normal 
 
 
-
 
NC_009512  Pput_4863  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
686 aa  409  1e-113  Pseudomonas putida F1  Bacteria  normal  decreased coverage  0.0070905 
 
 
-
 
NC_010322  PputGB1_5039  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
686 aa  409  1e-113  Pseudomonas putida GB-1  Bacteria  normal  0.468878  normal 
 
 
-
 
NC_004578  PSPTO_5031  type IV pilus biogenesis protein PilJ  40.3 
 
 
680 aa  409  1.0000000000000001e-112  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0491  chemotaxis sensory transducer  40.56 
 
 
680 aa  409  1.0000000000000001e-112  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3631  putative methyl-accepting chemotaxis sensory transducer  40.97 
 
 
731 aa  397  1e-109  Saccharophagus degradans 2-40  Bacteria  normal  0.455048  normal 
 
 
-
 
NC_010717  PXO_01605  pilus biogenesis protein  39.97 
 
 
678 aa  389  1e-106  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.128934  n/a   
 
 
-
 
NC_007947  Mfla_1245  methyl-accepting chemotaxis sensory transducer  62.76 
 
 
543 aa  381  1e-104  Methylobacillus flagellatus KT  Bacteria  normal  0.403133  normal  0.310409 
 
 
-
 
NC_011662  Tmz1t_3691  methyl-accepting chemotaxis sensory transducer  63.16 
 
 
704 aa  375  1e-102  Thauera sp. MZ1T  Bacteria  normal  0.02239  n/a   
 
 
-
 
NC_011071  Smal_3086  methyl-accepting chemotaxis sensory transducer  39 
 
 
678 aa  360  6e-98  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.12197 
 
 
-
 
NC_010513  Xfasm12_1019  putative methyl-accepting chemotaxis sensory transducer  37.74 
 
 
680 aa  359  9.999999999999999e-98  Xylella fastidiosa M12  Bacteria  normal  0.58121  n/a   
 
 
-
 
NC_010577  XfasM23_0895  methyl-accepting chemotaxis sensory transducer  37.89 
 
 
680 aa  357  2.9999999999999997e-97  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2397  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
686 aa  351  4e-95  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.688228 
 
 
-
 
NC_013422  Hneap_0517  methyl-accepting chemotaxis sensory transducer  38.3 
 
 
671 aa  341  2e-92  Halothiobacillus neapolitanus c2  Bacteria  normal  0.104858  n/a   
 
 
-
 
NC_007484  Noc_0128  chemotaxis sensory transducer  56.36 
 
 
537 aa  339  9e-92  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_2098  methyl-accepting chemotaxis sensory transducer  53.82 
 
 
473 aa  327  4.0000000000000003e-88  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1815  putative chemotaxis sensory transducer  54.2 
 
 
475 aa  324  5e-87  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_2156  methyl-accepting chemotaxis sensory transducer  54.28 
 
 
575 aa  323  6e-87  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0358  methyl-accepting chemotaxis sensory transducer  50.62 
 
 
560 aa  310  5e-83  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0237962  normal  0.734928 
 
 
-
 
NC_007604  Synpcc7942_1015  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
839 aa  218  4e-55  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0741142  normal 
 
 
-
 
NC_007413  Ava_0506  chemotaxis sensory transducer  35.64 
 
 
982 aa  210  9e-53  Anabaena variabilis ATCC 29413  Bacteria  normal  0.202983  normal 
 
 
-
 
NC_011884  Cyan7425_3745  methyl-accepting chemotaxis sensory transducer  35.29 
 
 
852 aa  208  3e-52  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4950  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
975 aa  206  1e-51  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2778  methyl-accepting chemotaxis sensory transducer with GAF sensor  38.03 
 
 
1153 aa  205  2e-51  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.970502 
 
 
-
 
NC_011726  PCC8801_3339  methyl-accepting chemotaxis sensory transducer with GAF sensor  38.03 
 
 
1153 aa  205  2e-51  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_2782  methyl-accepting chemotaxis sensory transducer with GAF sensor  38.11 
 
 
902 aa  205  2e-51  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_3002  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
915 aa  205  3e-51  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4746  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
503 aa  202  9.999999999999999e-51  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.000363987 
 
 
-
 
NC_013161  Cyan8802_0749  methyl-accepting chemotaxis sensory transducer  38.53 
 
 
880 aa  201  3.9999999999999996e-50  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0720  methyl-accepting chemotaxis sensory transducer  38.53 
 
 
880 aa  201  3.9999999999999996e-50  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_0858  methyl-accepting chemotaxis sensory transducer with phytochrome sensor  37.08 
 
 
1406 aa  200  9e-50  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0185965  normal  0.079214 
 
 
-
 
NC_011884  Cyan7425_1064  methyl-accepting chemotaxis sensory transducer with GAF sensor  36.89 
 
 
879 aa  198  4.0000000000000005e-49  Cyanothece sp. PCC 7425  Bacteria  normal  0.698769  hitchhiker  0.00000570114 
 
 
-
 
NC_011729  PCC7424_2793  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
778 aa  196  1e-48  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
542 aa  191  5.999999999999999e-47  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
557 aa  189  1e-46  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  37.31 
 
 
549 aa  188  3e-46  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_013161  Cyan8802_4347  methyl-accepting chemotaxis sensory transducer  33.79 
 
 
854 aa  188  3e-46  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_4287  methyl-accepting chemotaxis sensory transducer  33.79 
 
 
854 aa  187  6e-46  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_3246  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
1105 aa  186  2.0000000000000003e-45  Trichodesmium erythraeum IMS101  Bacteria  normal  0.610597  normal  0.482443 
 
 
-
 
NC_011884  Cyan7425_1426  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
768 aa  182  2.9999999999999997e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.541717  normal  0.185322 
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
550 aa  181  4.999999999999999e-44  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  36.51 
 
 
550 aa  179  1e-43  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.98 
 
 
549 aa  179  2e-43  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0343  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
1079 aa  178  3e-43  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
541 aa  178  4e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
538 aa  176  1.9999999999999998e-42  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0061  chemotaxis sensory transducer  37.38 
 
 
752 aa  175  1.9999999999999998e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  0.691552  normal  0.30416 
 
 
-
 
NC_011729  PCC7424_4603  methyl-accepting chemotaxis sensory transducer  31.84 
 
 
820 aa  176  1.9999999999999998e-42  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.452141 
 
 
-
 
NC_014212  Mesil_1845  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
660 aa  175  2.9999999999999996e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  0.655459  normal  0.855545 
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
423 aa  174  3.9999999999999995e-42  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  34.15 
 
 
543 aa  174  3.9999999999999995e-42  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1425  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
787 aa  174  7.999999999999999e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.68627  normal  0.569737 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
549 aa  173  1e-41  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  35.67 
 
 
533 aa  172  2e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  33.85 
 
 
626 aa  172  2e-41  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
NC_002939  GSU0756  methyl-accepting chemotaxis protein  36.7 
 
 
549 aa  171  4e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  35.45 
 
 
533 aa  171  4e-41  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
628 aa  171  4e-41  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  34.29 
 
 
544 aa  171  5e-41  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  35.08 
 
 
540 aa  171  6e-41  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
601 aa  171  6e-41  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_007912  Sde_0520  putative methyl-accepting chemotaxis sensory transducer  33.33 
 
 
711 aa  170  7e-41  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  36.39 
 
 
549 aa  170  8e-41  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
540 aa  170  8e-41  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
636 aa  170  9e-41  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
570 aa  170  1e-40  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008463  PA14_30820  putative methyl-accepting chemotaxis transducer  34.47 
 
 
535 aa  169  2e-40  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142633  hitchhiker  0.0000000000042709 
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  34.56 
 
 
539 aa  168  2.9999999999999998e-40  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_013946  Mrub_0909  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
754 aa  168  4e-40  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  41.02 
 
 
541 aa  167  4e-40  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2776  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.09 
 
 
1142 aa  168  4e-40  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.380177 
 
 
-
 
NC_011726  PCC8801_3341  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.09 
 
 
1142 aa  167  5e-40  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
540 aa  167  5e-40  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
544 aa  167  5.9999999999999996e-40  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
547 aa  167  6.9999999999999995e-40  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>