Gene Tbd_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2549 
Symbol 
ID3672525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2624763 
End bp2626886 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content66% 
IMG OID637711255 
Productchemotaxis sensory transducer 
Protein accessionYP_316307 
Protein GI74318567 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGG CAATCACGAT GAACGGCCTC AAGGGGCTGG CGGGCCGCAT GACCGGCAGG 
GCCAGCACGG GCGGCGGCCG GGGCGAGCAT ACGACGCTCA TCATGCAGAC GGTGCGCAAG
CTCGCCGACA AGGAGCCGGG CCGTGCTCCG CTGATCGGGC ATCTGCCGGT CGACAAGCAA
TATCTCTACA CCGGCGGCAC GCTGATCGCA TCGCTGCTGC TCGCCGCCGG CTTCACCATC
TACGGCGCGA TCCAGCTCGA CAACCGCGCG GGCTACGAAG CGCGCGCCGG CGAACTGAAG
GTGTTGTCGC AGCGCCTGCC CTTGACCGCG CAGCAGTCGG TGCTCGGCAA CGCGATCGCG
TTCAAGAAAC TGTCCGAAGG CAATGCGGCC TTCGAAGCGA CCTTGAAACA ACTCACCGAC
GGCGACGACG AGGTGCCTGC GTCGGGTGGG GCGGCGCGCG ACACGCTCGG AAAGATCGGC
GCACAGTGGA AGACCTTCGA CCCGCAGGTG AAGCAGATCC TGTCGCAGCA GAAGAACCTC
GTCGCGATGA GCGAGAGCGT CAAGCGCATC AACGCCCTCA GTATCGATCT GCAGGAGGTT
TCCGAGCAGC TCGCGAGCCA ACTCGCCGAT TCCGGGTCGG GCGTGCGCGA AGTATCGCGC
GCCAACCACC TCGTCATGCT GAGCCAGCGC CTGCCGAAAA ACGCGAACCT GCTGCTCTCC
GCCGACCTGA TCGACCCCGA GGTCGTGCTG CAGCTCGAGA AGGATACGAC CTCGTTCCGC
GACACGGTGC AGGCCCTGAT GGAAGGCGCG GCGAGCCAGA GCGAGGGCAG CATGCTGACG
CTCGAGGATC TCGGCGCCAA CATGGGTGAC ATGGTCGAGG CGGTCGGCGC CGTGCTCGCC
AACACCCAGC CGCTGCTGCA GGCCAAGCTC GCCGCCAACA ACCTCTTCGT CGGCAGCGAC
GCGCTGCTGC AGGATACCGA CCAGCTGTCT CAGGATTACC AGTCGGTCGG CGGCGCGGGC
TATCTGCTCG CGGCGGTGTT CGGCGTGCTT GCGATCGGCG CGCTGGTCAT GCTCGGCCTG
GTCAACATCA ACGAAACCAA GTCGCGGGCG CGCAAGAGTG AAGAGGAGAA CAGCCGTAAC
CAGGAGGCGA TCCTGCGTCT CATGGATGAA CTCGGCGAAC TCGCCGAAGG CAACCTCACG
ATCAACGCGA GCGTGACCGA AGACATCACC GGCGCGGTCG CCGACTCGAT CAACTACACG
GTCGAGGAGC TGCGCACCCT GGTGCGCGGG ATCAACAACG CGACCCAGCA GATGGACCAG
GCGGCGAGCC AAGCCGGCAA GGTGTCCGAG TCGCTGCAGC AGGCGGCACG CCGCCAGACC
GATGAAATCG AAGCGACGTC GGTCGCGGTC GTGCGTCTCG CGCAGTCCGT GCAGCAGGTG
TCGGGCAACG CCGCCGAATC CGCCAAGGTC GCGGAGCAGT CGCTCGCGGC CGCCGAAAAA
GGCCAGCAGG CCGTGGCCAA CGCGATCACC GGCATGAACA CGCTGCGCGA ACAGATTCAG
GAAACGTCGA AGCGAATCAA GCGTCTCGGT GAGTCGTCGC AGGAGATCGG CGAAATCGTC
GAGCTGATTT CCGACATTAC CGAACAGACC AACGTGCTGG CGCTCAACGC CGCGATCCAG
GCGGCGTCGG CGGGCGAGGC CGGCCGCGGA TTCTCGGTCG TCGCGGAAGA GGTGCAACGC
CTGGCGGAAC GTTCGGCCGA CGCGACCAAG CAGATCGCAG CGATCGTTAA GACGATTCAG
TCCGACACCC ACGACACGGT CGCGGCGATG GAGGTCTCGA CCCAGGGCGT GGTCGAGGGG
GCGAAGCTGT CGGACGCGGC GGGTCAGACG CTGGCCGAGA TCGGCGACGT GTCGAAGAAG
CTCGCCGGCC TGATCGCCGA CATTTCCTCG GCGACCCAGA ACCAGGCCGA GTCGACGGCG
CTCGTCGCCG AGACCATGCA GGACATCAAG ACGATTTCCG CACAGACCAG CGAAGGCACC
CAGCAGACGG CGGACTCGAT CGGCGGCATG AAACAGCTGG CCCAGGACCT CAAGAACTCG
ATCGCAGGCT TCAAGCTCGC CTGA
 
Protein sequence
MNMAITMNGL KGLAGRMTGR ASTGGGRGEH TTLIMQTVRK LADKEPGRAP LIGHLPVDKQ 
YLYTGGTLIA SLLLAAGFTI YGAIQLDNRA GYEARAGELK VLSQRLPLTA QQSVLGNAIA
FKKLSEGNAA FEATLKQLTD GDDEVPASGG AARDTLGKIG AQWKTFDPQV KQILSQQKNL
VAMSESVKRI NALSIDLQEV SEQLASQLAD SGSGVREVSR ANHLVMLSQR LPKNANLLLS
ADLIDPEVVL QLEKDTTSFR DTVQALMEGA ASQSEGSMLT LEDLGANMGD MVEAVGAVLA
NTQPLLQAKL AANNLFVGSD ALLQDTDQLS QDYQSVGGAG YLLAAVFGVL AIGALVMLGL
VNINETKSRA RKSEEENSRN QEAILRLMDE LGELAEGNLT INASVTEDIT GAVADSINYT
VEELRTLVRG INNATQQMDQ AASQAGKVSE SLQQAARRQT DEIEATSVAV VRLAQSVQQV
SGNAAESAKV AEQSLAAAEK GQQAVANAIT GMNTLREQIQ ETSKRIKRLG ESSQEIGEIV
ELISDITEQT NVLALNAAIQ AASAGEAGRG FSVVAEEVQR LAERSADATK QIAAIVKTIQ
SDTHDTVAAM EVSTQGVVEG AKLSDAAGQT LAEIGDVSKK LAGLIADISS ATQNQAESTA
LVAETMQDIK TISAQTSEGT QQTADSIGGM KQLAQDLKNS IAGFKLA