| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0671 |
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| Symbol | pilJ |
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| ID | 1219476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 714713 |
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| End bp | 716944 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237030 |
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| Product | putative twitching motility transmembrane protein |
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| Protein accession | NP_518792 |
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| Protein GI | 17545390 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.357708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTTCA AGTGGTTCAA CGCGGGTCGC CGTGCCGGGG GTGAGGCAGA GGCGCCGGAA
GTTGCAGCGG AAGGCGCCGG GGTCGCGGCC GTGCAGTTGG ATAGCGCCCA GGTGGACGAG
ATCGATCCTG CTGGTCCGCC GTCGCAACTC AGCCACGGCC CGATCGACAA GGTGGTCGGC
TGGATCGAGC GGGTGCCGTT CGTGGCCCAG CAGCGCGTGT TCACGGTCGG CCTGCTGGCC
GGTCTGGTGG CGCTGCTGGC CTCGATCTAC TTCGATAACC GGCAAGCCAA CAACGGTTCG
CTGCAGATCG AAATCGCCGG TGACACGCTG ATGCACTCGC AGCGTCTGGC CAAGGCAGTG
CCGGTGGCGC TGCTGGGTAA CGAGAGCGCC TTCACGCAGC TCAAGGAAAG CCGTGCGCGG
CTGCAGAGCA ACCTCGAAGC GCTGAAGACC GGTAGCGCCG ACCGCGGCTT GAGCGCCACG
GCCGGCGGTG AAGCCCAGGC GTTGCTCGAC AAGTCCATCG AAGAGTGGAA GCGCAGCGAG
AAGAGCGCCC AGGCGGTGCT GGCCCAGGAA AAGACCCTGG TGTCGGTGGG TAAGACGCTG
AACGTGTTCA ATGCCTCCAA CCCGGAACTG CTGGAAGAAG CCGAGCAGAT CTCGTCGATG
AAGCTGCAGA CCAACGCGCC GGCGCGTGAA GTGGCCGCGT CGTCGCAGCT GGTGATGCTG
ACGCAGCGTC TCGGTAAGAA CATGAACGAG TTCCTGGCCG GTGAAGGCGT CAACCCGGAA
ACCGCGTTCC TGCTGGGCAA GGACACCAAC ACCTTCCGCG AAACCCTGAA CGGTCTGCTC
AACGGCTCGG AAGCGCTGCG CCTGTCGGCA GCCACCGATC CGGAAACCAA GGGCTATCTG
CAAGAGCTGT CGACCCGTTT CGACAACGTG CAGAAGACCA CGCAGATCAT TCTGGAGAAC
CTGCCGGGCC TGATCGCCGC CAAGCGCGCC CAGCAGCAGA TCTTCAACGA CAACGAAAAG
CTGCGTGCCG ACCTGTCGGA CCTGCAGTCG GCCTATTCGG GCAGCGTGCG CAGCCGTCCG
CTGACGCTCG GCGCCGTCGT GCTGTCGGCC ATCCTGACGG TGGCCTGCCT GGCCGGTCTG
GCGGCCCTGT ACCTGCGCGA CTCGCGTGTG CGTGCAATGG AAGCAGAAGC GCGCCAGCGT
GAAGCCGAAG AGCGCCGGAT GGTGGAAAAG CGCAACAACG ATGCCACCCA GGCCGCAATT
CTGCGTCTGA TGAACGAACT GCAGGACATC GCAGACGGTG ACTTGACCAA GCAGGCCACC
GTGTCGGAAG ACATTACCGG CGCGATCGCC GACTCGGTGA ACTACACCGT GGAAGAACTG
CGCGAGCTGG TCGGCCGGGT GCAGCAGACC GCCGAGCAGG TGACGCAGGC CTCGTCGGCG
GTGCAGACCA CCTCCGACAA GCTGGTGCTC GCCTCCGAAG AACAGTCCCG CCAGATCCGC
CAGACCGGCC AGTCGGTGGT GGAGATGGCC GACCGCATTA CGCAGGTCTC GCGCGGCGCC
GCCGAATCCG CGAACGTGGC GCGCGCCTCG CTGGCTGCTG CCGAGCAGGG TCAGGTGGCC
GTGCAGAACG CGATCACGGG CATGAACGAC ATCCGCGACC AGATTCAGGA CACCTCCAAG
CGGATCAAGC GCCTGGGCGA ATCGTCGCAG GAGATCGGTG AAATCGTGGA GCTGATCTCG
GACATTACCG AGCAGACCAA CGTGCTGGCA CTGAACGCAG CCATCCAGGC CGCCTCCGCA
GGTGAAGCCG GCCGCGGCTT CTCCGTGGTG GCCGAGGAAG TGCAGCGTCT GGCAGAACGT
TCCGCCGAGG CAGCCAAGCA GATCGGTGCG CTGATCCGCA CGATTCAGAC CGACACCCAG
GACGCGGTGC ACGCAATGGA GCGCAGCACG GCCGGTGTGG TGGAAGGGGC CAAGCTGTCG
GACAACGCTG GTACCGCTCT GGTGGAGATC GGCCGCGTGT CGCGCCAGCT TGCCGAACTG
ATTGAAAGCA TCTCGCAAAC GACTTCGCAC GAAGCGACGC TGGCTTCCGA CGTGGCGCAG
AACATCGAGC AGATCCTGCA GATGACGGAG CAGACGTCGA CGGGGTCCCG TCAGACCGCG
CAATCGGTGC GCCAGCTCAC GCAGCTTGCA GAAGAGCTGC GCGATTCGGT GGCCCGTTTC
CGCATCGCCT GA
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| Protein sequence | MGFKWFNAGR RAGGEAEAPE VAAEGAGVAA VQLDSAQVDE IDPAGPPSQL SHGPIDKVVG
WIERVPFVAQ QRVFTVGLLA GLVALLASIY FDNRQANNGS LQIEIAGDTL MHSQRLAKAV
PVALLGNESA FTQLKESRAR LQSNLEALKT GSADRGLSAT AGGEAQALLD KSIEEWKRSE
KSAQAVLAQE KTLVSVGKTL NVFNASNPEL LEEAEQISSM KLQTNAPARE VAASSQLVML
TQRLGKNMNE FLAGEGVNPE TAFLLGKDTN TFRETLNGLL NGSEALRLSA ATDPETKGYL
QELSTRFDNV QKTTQIILEN LPGLIAAKRA QQQIFNDNEK LRADLSDLQS AYSGSVRSRP
LTLGAVVLSA ILTVACLAGL AALYLRDSRV RAMEAEARQR EAEERRMVEK RNNDATQAAI
LRLMNELQDI ADGDLTKQAT VSEDITGAIA DSVNYTVEEL RELVGRVQQT AEQVTQASSA
VQTTSDKLVL ASEEQSRQIR QTGQSVVEMA DRITQVSRGA AESANVARAS LAAAEQGQVA
VQNAITGMND IRDQIQDTSK RIKRLGESSQ EIGEIVELIS DITEQTNVLA LNAAIQAASA
GEAGRGFSVV AEEVQRLAER SAEAAKQIGA LIRTIQTDTQ DAVHAMERST AGVVEGAKLS
DNAGTALVEI GRVSRQLAEL IESISQTTSH EATLASDVAQ NIEQILQMTE QTSTGSRQTA
QSVRQLTQLA EELRDSVARF RIA
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