More than 300 homologs were found in PanDaTox collection
for query gene Sde_3631 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_4989  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
686 aa  649    Pseudomonas putida KT2440  Bacteria  normal  0.289293  normal 
 
 
-
 
NC_010322  PputGB1_5039  methyl-accepting chemotaxis sensory transducer  57.26 
 
 
686 aa  650    Pseudomonas putida GB-1  Bacteria  normal  0.468878  normal 
 
 
-
 
NC_004578  PSPTO_5031  type IV pilus biogenesis protein PilJ  57.25 
 
 
680 aa  671    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0491  chemotaxis sensory transducer  56.8 
 
 
680 aa  664    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0406  methyl-accepting chemotaxis sensory transducer  61.47 
 
 
678 aa  748    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3770  methyl-accepting chemotaxis sensory transducer  61.13 
 
 
691 aa  748    Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5305  chemotaxis sensory transducer  57.01 
 
 
686 aa  678    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.115158  normal  0.281343 
 
 
-
 
NC_009656  PSPA7_0511  twitching motility protein PilJ  62.23 
 
 
682 aa  766    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4863  methyl-accepting chemotaxis sensory transducer  57.41 
 
 
686 aa  651    Pseudomonas putida F1  Bacteria  normal  decreased coverage  0.0070905 
 
 
-
 
NC_007912  Sde_3631  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
731 aa  1459    Saccharophagus degradans 2-40  Bacteria  normal  0.455048  normal 
 
 
-
 
NC_008463  PA14_05360  twitching motility protein PilJ  62.37 
 
 
682 aa  768    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0475  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
686 aa  662    Pseudomonas putida W619  Bacteria  normal  0.178091  normal 
 
 
-
 
NC_011901  Tgr7_2901  putative methyl-accepting chemotaxis sensory transducer  48.25 
 
 
700 aa  545  1e-153  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.726182  n/a   
 
 
-
 
NC_007969  Pcryo_2098  methyl-accepting chemotaxis sensory transducer  64.39 
 
 
473 aa  493  9.999999999999999e-139  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1815  putative chemotaxis sensory transducer  72.27 
 
 
475 aa  487  1e-136  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2397  methyl-accepting chemotaxis sensory transducer  44.23 
 
 
686 aa  470  1.0000000000000001e-131  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.688228 
 
 
-
 
NC_010717  PXO_01605  pilus biogenesis protein  44.84 
 
 
678 aa  468  9.999999999999999e-131  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.128934  n/a   
 
 
-
 
NC_011071  Smal_3086  methyl-accepting chemotaxis sensory transducer  44.84 
 
 
678 aa  458  1e-127  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.12197 
 
 
-
 
NC_010577  XfasM23_0895  methyl-accepting chemotaxis sensory transducer  42.88 
 
 
680 aa  450  1e-125  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_2156  methyl-accepting chemotaxis sensory transducer  69.91 
 
 
575 aa  448  1.0000000000000001e-124  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0128  chemotaxis sensory transducer  70.78 
 
 
537 aa  443  1e-123  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1019  putative methyl-accepting chemotaxis sensory transducer  42.58 
 
 
680 aa  446  1e-123  Xylella fastidiosa M12  Bacteria  normal  0.58121  n/a   
 
 
-
 
NC_013422  Hneap_0517  methyl-accepting chemotaxis sensory transducer  41.5 
 
 
671 aa  418  9.999999999999999e-116  Halothiobacillus neapolitanus c2  Bacteria  normal  0.104858  n/a   
 
 
-
 
NC_003295  RSc0671  putative twitching motility transmembrane protein  42.88 
 
 
743 aa  409  1.0000000000000001e-112  Ralstonia solanacearum GMI1000  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_010682  Rpic_0615  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
745 aa  407  1.0000000000000001e-112  Ralstonia pickettii 12J  Bacteria  normal  0.685399  normal 
 
 
-
 
NC_012856  Rpic12D_0563  methyl-accepting chemotaxis sensory transducer  41.72 
 
 
745 aa  406  1.0000000000000001e-112  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0358  methyl-accepting chemotaxis sensory transducer  63.39 
 
 
560 aa  404  1e-111  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0237962  normal  0.734928 
 
 
-
 
NC_007347  Reut_A2620  methyl-accepting chemotaxis sensory transducer  38.43 
 
 
733 aa  390  1e-107  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0672  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
733 aa  378  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  0.371682  normal  0.522662 
 
 
-
 
NC_007298  Daro_3896  chemotaxis sensory transducer  39.91 
 
 
706 aa  373  1e-102  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3575  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
754 aa  372  1e-101  Acidovorax sp. JS42  Bacteria  normal  0.946853  normal  0.162427 
 
 
-
 
NC_011992  Dtpsy_2898  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
754 aa  369  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  0.0204496  n/a   
 
 
-
 
NC_007947  Mfla_1245  methyl-accepting chemotaxis sensory transducer  57.92 
 
 
543 aa  368  1e-100  Methylobacillus flagellatus KT  Bacteria  normal  0.403133  normal  0.310409 
 
 
-
 
NC_008752  Aave_0904  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
745 aa  365  2e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.405383 
 
 
-
 
NC_007404  Tbd_2549  chemotaxis sensory transducer  39.54 
 
 
707 aa  365  2e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3018  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
767 aa  365  2e-99  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.238689  normal  0.701163 
 
 
-
 
NC_008781  Pnap_3351  methyl-accepting chemotaxis sensory transducer  38.27 
 
 
759 aa  362  2e-98  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.335724  normal 
 
 
-
 
NC_007948  Bpro_1139  methyl-accepting chemotaxis sensory transducer  37.26 
 
 
692 aa  353  5.9999999999999994e-96  Polaromonas sp. JS666  Bacteria  normal  normal  0.534971 
 
 
-
 
NC_010002  Daci_1575  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
749 aa  344  4e-93  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.114033 
 
 
-
 
NC_012791  Vapar_4623  methyl-accepting chemotaxis sensory transducer  38.34 
 
 
770 aa  338  2.9999999999999997e-91  Variovorax paradoxus S110  Bacteria  normal  0.408638  n/a   
 
 
-
 
NC_011662  Tmz1t_3691  methyl-accepting chemotaxis sensory transducer  58.58 
 
 
704 aa  337  5e-91  Thauera sp. MZ1T  Bacteria  normal  0.02239  n/a   
 
 
-
 
NC_007908  Rfer_1374  methyl-accepting chemotaxis sensory transducer  44.16 
 
 
759 aa  336  9e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.43954  n/a   
 
 
-
 
NC_008825  Mpe_A3187  methyl-accepting chemotaxis sensory transducer  36.15 
 
 
745 aa  329  1.0000000000000001e-88  Methylibium petroleiphilum PM1  Bacteria  normal  0.484204  normal  0.234759 
 
 
-
 
NC_010524  Lcho_3968  methyl-accepting chemotaxis sensory transducer  53.53 
 
 
777 aa  323  7e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0103685 
 
 
-
 
NC_007604  Synpcc7942_1015  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
839 aa  234  5e-60  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0741142  normal 
 
 
-
 
NC_011726  PCC8801_3339  methyl-accepting chemotaxis sensory transducer with GAF sensor  39.76 
 
 
1153 aa  223  9.999999999999999e-57  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2778  methyl-accepting chemotaxis sensory transducer with GAF sensor  39.76 
 
 
1153 aa  223  9.999999999999999e-57  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.970502 
 
 
-
 
NC_011884  Cyan7425_3745  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
852 aa  220  7.999999999999999e-56  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2782  methyl-accepting chemotaxis sensory transducer with GAF sensor  39.1 
 
 
902 aa  217  8e-55  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_4950  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
975 aa  214  3.9999999999999995e-54  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0506  chemotaxis sensory transducer  37.14 
 
 
982 aa  214  3.9999999999999995e-54  Anabaena variabilis ATCC 29413  Bacteria  normal  0.202983  normal 
 
 
-
 
NC_011884  Cyan7425_4746  methyl-accepting chemotaxis sensory transducer  36.83 
 
 
503 aa  209  2e-52  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.000363987 
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
570 aa  207  5e-52  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_011729  PCC7424_3002  methyl-accepting chemotaxis sensory transducer  36.76 
 
 
915 aa  205  3e-51  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
542 aa  204  4e-51  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1425  methyl-accepting chemotaxis sensory transducer  40.94 
 
 
787 aa  201  3e-50  Cyanothece sp. PCC 7425  Bacteria  normal  0.68627  normal  0.569737 
 
 
-
 
NC_011884  Cyan7425_1064  methyl-accepting chemotaxis sensory transducer with GAF sensor  39.14 
 
 
879 aa  200  7.999999999999999e-50  Cyanothece sp. PCC 7425  Bacteria  normal  0.698769  hitchhiker  0.00000570114 
 
 
-
 
NC_011729  PCC7424_2793  methyl-accepting chemotaxis sensory transducer  38.7 
 
 
778 aa  200  9e-50  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_0858  methyl-accepting chemotaxis sensory transducer with phytochrome sensor  37.39 
 
 
1406 aa  200  9e-50  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0185965  normal  0.079214 
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
541 aa  199  1.0000000000000001e-49  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
550 aa  199  1.0000000000000001e-49  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
538 aa  199  2.0000000000000003e-49  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_3246  methyl-accepting chemotaxis sensory transducer  38.62 
 
 
1105 aa  199  2.0000000000000003e-49  Trichodesmium erythraeum IMS101  Bacteria  normal  0.610597  normal  0.482443 
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
533 aa  198  3e-49  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
533 aa  198  3e-49  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  38.54 
 
 
557 aa  196  1e-48  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0720  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
880 aa  196  1e-48  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0749  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
880 aa  196  1e-48  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  39.51 
 
 
533 aa  196  2e-48  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  39.18 
 
 
549 aa  194  7e-48  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  38.96 
 
 
549 aa  193  9e-48  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
544 aa  193  1e-47  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_011884  Cyan7425_1426  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
768 aa  193  1e-47  Cyanothece sp. PCC 7425  Bacteria  normal  0.541717  normal  0.185322 
 
 
-
 
NC_007912  Sde_0520  putative methyl-accepting chemotaxis sensory transducer  36.28 
 
 
711 aa  191  2.9999999999999997e-47  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  37.14 
 
 
540 aa  191  4e-47  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
540 aa  191  5.999999999999999e-47  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  36.16 
 
 
549 aa  190  7e-47  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
547 aa  189  1e-46  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  38.63 
 
 
539 aa  189  1e-46  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3778  chemotaxis sensory transducer, phytochrome sensor  38.04 
 
 
1100 aa  189  1e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.275371 
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  38.08 
 
 
549 aa  188  3e-46  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_013501  Rmar_0343  methyl-accepting chemotaxis sensory transducer  33.99 
 
 
1079 aa  187  4e-46  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
547 aa  188  4e-46  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  39.08 
 
 
661 aa  187  7e-46  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
540 aa  186  1.0000000000000001e-45  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
830 aa  186  1.0000000000000001e-45  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
540 aa  186  1.0000000000000001e-45  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  35.29 
 
 
628 aa  186  2.0000000000000003e-45  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  38.82 
 
 
528 aa  185  3e-45  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
542 aa  184  7e-45  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  33.58 
 
 
563 aa  183  9.000000000000001e-45  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
674 aa  183  9.000000000000001e-45  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_011146  Gbem_2857  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
392 aa  183  1e-44  Geobacter bemidjiensis Bem  Bacteria  normal  0.0205381  n/a   
 
 
-
 
NC_013161  Cyan8802_2776  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.62 
 
 
1142 aa  182  2e-44  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.380177 
 
 
-
 
NC_012918  GM21_1357  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
392 aa  182  2e-44  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.9116599999999996e-27 
 
 
-
 
NC_011726  PCC8801_3341  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.62 
 
 
1142 aa  181  2.9999999999999997e-44  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  37.42 
 
 
539 aa  181  4e-44  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  33.67 
 
 
392 aa  181  4e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  37.89 
 
 
544 aa  181  4e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  38.34 
 
 
541 aa  181  4.999999999999999e-44  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
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