Gene PputGB1_5039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5039 
Symbol 
ID5872854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5630820 
End bp5632880 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content64% 
IMG OID641550177 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001671259 
Protein GI167036028 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.468878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAGC CTGCCACCCC CGTCACTGCC ACCACCGTGA CCCCACGTAC CCGCAGCATC 
GCGCAGATCA CCGTGCTGTT CCTGATCCTG ATCCTGTCGA TCATCCTGCT GTTCGCCAAC
TTCGCCTACC TCAATACCCA GTCCAACTAC GACAAGCAGT ACATCGGCCA TGCCGGTGAG
CTGCGTGTGC TGTCGCAACG CATTGCCAAG AACGCCACCG AAGCGGCCAC CGGCAAGGCG
TTGGCGTTCA AGCTGCTGTC GGATGCGCGC AACGATTTCG AGCGTCGCTG GGGCTACCTG
CGTCAGGGTG ACAAGTCCAC CGGCCTGCCG CCTGCGCCAC CCTCGGTGCG TGACGAGATG
GAGTCGGTAC GCCGTGACTG GGAAAACCTG CGTAAGAACA CCGACATCAT CCTGGCCAGC
GAGCAGACCG TGCTGTCGTT GCACCAGGTG GCGGCGACCC TGGCCGAGAC CGTGCCGCAG
TTGCAGGTGG AATACGAAAA AGTGGTCGAG ATCCTGCTGC AGAGCGGTGC CCCGGCCAAT
CAGGTGGCGG TGGCCCAGCG CCAGCTGTTG CTGGCCGAGC GTATTCTCGG CTCGGTCAAC
ACGGTGTTGG CCGGTGACGA CAGCGCAGCC CAGGCGGCCG ATGCCTTTGG CCGCGACGCC
GGGCGCTTTG GTCAGGTGCT GGAGGGTATG CTCAATGGCA ATGCGACCAT CCAGGTAACC
CGCGTCGAGG ACGCCGACGC CCGCGCACGG CTGGCCGAAA TTGCCGAACT GTTCCAGTTC
GTTGCAGGTT CGGTCGATGA AATTCTCGAA ACTTCGCCCG AACTGTTCCG TGTGCGTGAA
GCCGCAGGCA ACATTTTCAG CCTTTCGCAA ACCTTGCTCG ACGAAGCCTC GCACTTGGCC
AACGGTTTCG AGAACCTGGC CGGTGGGCGC ACCCTCGACA CCGTTGGCGG TTACGCCCTG
GGCCTGCTGG CGCTGGCCTC GATCATCCTC ATCGGCCTGG TCATGGTGCG TACCACCAAC
CGCCAGTTGC GCGAGACCGC AGAAAAGAAC GAACGCAACC AGCAGGCGAT CATGCGCCTG
CTCGACGAAA TCGAAGAGCT GGCCGACGGC GACCTGACCG TGACCGTGTC GGTGACCGAA
GACTTCACCG GCGCCATTGC CGACTCGATC AACTATTCCG TGGACCAGCT GCGCGACCTG
GTCGCCACCA TCAACCACAG CGCCATGCAG GTTGCCGCCG CTGTGCAGGA CACGCAGAAC
ACCGCTCGCC AACTGGCCAA GGCCTCCGAG CACCAGGCCG CACAAATCAG CGAAGCGTCC
GAGGCGGTTG GCGACATGGT CGAGTCGATC GATCGGGTGT CGGCGCATGC CTATGAATCG
GCCAAGGTGG CCGAGCGCTC GGTGGCTATT GCCAACAAGG GCAACGAGGT GGTGCATAAC
ACCATCAACG GCATGGACAA CATTCGCGAG CAGATCCAGG ACACCGCCAA GCGGATCAAG
CGCCTGGGCG AGTCTTCCCA GGAAATCGGC GACATCGTCA GCCTGATCGA CGACATTGCC
GACCAAACCA ACATTCTCGC ACTCAACGCT GCGATCCAGG CCTCGCTGGC CGGTGAGGCC
GGCCGCGGGT TTGCCGTGGT CGCCGACGAG GTACAGCGCC TGGCCGAACG CTCGTCGTCG
GCCACCCGCC AGATCGAGGC ACTGGTGCGC ACCATTCAGG CCGACACCAA CGAAGCGGTG
ATCTCCATGG AGCAGACCAC CGCCGAAGTG GTGCGCGGCG CCCGCCTGGC CCAGGATGCC
GGGGTGGCGC TGGCCGAGAT CGAAGGGGTA TCGCAGAACC TTGCCGACCT CATCCACAGC
ATTTCCGACG CTGCCCAGTT GCAGACTTCT TCGGCAGGGC AGATCTCCCA TACCATGGCG
GTGATCCAGC AGATTACCGC GCAAACCTCC GCAGGCTCGG GTGCCACCGC CGACAGTATT
CGCCACCTGG CCCGCATGGC CAGCGAGATG CGCCGTTCGG TGTCCGGTTT CACCCTGCCG
CCACCGGCAG AACCCAAGTG A
 
Protein sequence
MNKPATPVTA TTVTPRTRSI AQITVLFLIL ILSIILLFAN FAYLNTQSNY DKQYIGHAGE 
LRVLSQRIAK NATEAATGKA LAFKLLSDAR NDFERRWGYL RQGDKSTGLP PAPPSVRDEM
ESVRRDWENL RKNTDIILAS EQTVLSLHQV AATLAETVPQ LQVEYEKVVE ILLQSGAPAN
QVAVAQRQLL LAERILGSVN TVLAGDDSAA QAADAFGRDA GRFGQVLEGM LNGNATIQVT
RVEDADARAR LAEIAELFQF VAGSVDEILE TSPELFRVRE AAGNIFSLSQ TLLDEASHLA
NGFENLAGGR TLDTVGGYAL GLLALASIIL IGLVMVRTTN RQLRETAEKN ERNQQAIMRL
LDEIEELADG DLTVTVSVTE DFTGAIADSI NYSVDQLRDL VATINHSAMQ VAAAVQDTQN
TARQLAKASE HQAAQISEAS EAVGDMVESI DRVSAHAYES AKVAERSVAI ANKGNEVVHN
TINGMDNIRE QIQDTAKRIK RLGESSQEIG DIVSLIDDIA DQTNILALNA AIQASLAGEA
GRGFAVVADE VQRLAERSSS ATRQIEALVR TIQADTNEAV ISMEQTTAEV VRGARLAQDA
GVALAEIEGV SQNLADLIHS ISDAAQLQTS SAGQISHTMA VIQQITAQTS AGSGATADSI
RHLARMASEM RRSVSGFTLP PPAEPK