| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3968 |
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| Symbol | |
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| ID | 6162379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4454974 |
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| End bp | 4457307 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666746 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001792987 |
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| Protein GI | 171060638 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0103685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC TCGACAAGCT CAAGGGCTTT GGCAAACGCA ACAACGATGC GGATCTGGCC
GACGAGGTGT CGTATGTCGA CGCTTATTCG ATCGCCGACG ACAGCACCGA GATGCGCGAT
ACCGTCCAGG ACATCGGCCT GCACACCACC CACGCCGTGC CCGACGCGGC GATCATCAGC
GAGGCGTCGC CCTCGGGCGG CGCCTCGCGC TATCTCAATA CCCGCATGCC GGCCGGCGAT
TCGCCCGGCC ACGCGCCCGC GCCCGGCGGC GGGGTGCGCC TGCCGCTGAT CGGCCATCTG
TCGTCGGATC AGCAGCAGCG GCTGCTCGGC TCGGTGTTGG CGGTCGGCGT GCTGGGGCTG
GTGCTGGCGT CGGTGCTGGC GGTGCGCTCG GCCGGTGGCA GCGCAGCGCA GGTCGGTGCG
ACCGGTCAGG CGCTGATGCA GTCGCAGCGG CTGGCGAAAT CGGTGCTGCA GGCGATGGTC
GGCCACCCGC CGGCGTTTCC CGAGGTCCGC AACGCCGCCG ACGTGCTGGC GCGCAACGTG
CGCGGCCTGC GTGACGGCGG CAGCGTGCCC GGCCTCGAGG CCGCGCCGCT CGGCGCCCAG
CCCCTGCTCG AGCCGCTGCT GCCGCTGGTC GACAAGGCCG AGAAGAACGC CAAGATCGTG
CTCGCCCAGG AGCAGGTGCT GACCCAGGTC GGCACCGCGC TGCGCGCCAT CGGCAAGCAG
TCGACCGAGC TGCTCGAGAC CGCCGAGGCG GTGGCCGCGT TCAAGGTCCA GCAGGACGCC
CTGCCGACCG ACATCTCCGC CGCCGGCCAG CTGGTGATGC TGACCCAGCG CATCGGCAAG
TCGGCCAGCG AGTCGCTGAC CGTGCAGGGT GTCTCGCCCG AGGCGGTGTT CCTGCTCGGC
AAGGACCTCA ACACCTTCCA CGACCTGACC CGCGGCCTGC TCGACGGCAG CCCCGAACTG
CGCCTGACCT CCAGCCGCGA CGCCCCCACC CGCGATCGCC TGCAGGCGCT GCTGCGCGCC
CACGAGCAGC TGCGCACCCA GGCCGGCGTG ATCGTCGGCA ACCTGCAGGG GCTGGTGTCG
GCGCGTGAAG CGCAGACCGC GATCATTGCC GACAGCGAGA CGCTGCGCGC CGGGCTCGAG
GAAGTGCAGG GTGCGCTGTC CGCCGCAGGC GGCATGGGCT GGTTCAACGT GCTGCTGATC
GGCGCGTCGC TGCTGCTGGG CGTGATCGGC GGCCTCGGCC TGCTGGTGGT CTTCACGCAC
GACCAGCGTC AGCGCGCGAT GATGGCCGAC ACCCAGCGCC ACGAAGCCGA GCGCCAGGAG
CGCGAGGCCA AGCGCGTCAA CGACGCCAAC CAGGCCGCCA TTCTTCGGCT GATGAACGAG
CTGCAGTCGG TCGCCGAAGG CGACCTGACC CAGCAGGCCA CCGTCACCGA GGACATCACC
GGCGCGATCG CCGACTCGGT GAACTACACC GTCGAGGAGC TGCGCAACCT GGTCTCGCAG
GTGCAGGGCA CGGCCGCGCG CGTGACCGAC ACCACCCAGC AGGTCGAGGC CACGTCCACC
GAGCTGCTGG CGGCGTCCGA CGAGCAGCTG CGCGAGATCC GCGAGACCGG CGAGGCGGTG
CTGCAGATGG CCGGGCGCAT CCAGCGCGTC TCGGGCCAGG CGCAGCAGTC GGCCGACGTG
GCGCGCGAAT CGCTGATGGC GGCTACCTCG GGCCTGACCG CGGTGCTCGA CACCATCACC
GGCATGAACA CGCTGCGCGA CCAGATCCAG GACACCTCCA AGCGCATCAA GCGCCTGGGC
GAGTCGTCGC AGGAGATCGG CGAGATCACC GAGCTGATCT CCGACATCAC CGAGCAGACC
AACGTGCTGG CGCTCAACGC CGCCATCCAG GCCGCGTCCG CGGGGGAGGC CGGCCGCGGC
TTCTCGGTCG TGGCCGAAGA GGTGCAGCGC CTGGCCGAAC GCTCCGGCGA CGCCACCCGC
GCGATCGCCG TGCTGGTCAA GACCATCCAG ACCGACACCG CCGACGCGGT GGCGGCGATG
GAGCGCTCCA CGCAAGGCGT GGTCGAGGGC GCCAAGCTGT CCGACAACGC CGGCACCGCG
CTGGCCGAGA TCGACCGCAT CTCGCGCCAG CTGGCCGAGC TGATCGAGGA GATCGCCTCG
CAGGCGCGTC GCGAAGCCGA CGGCGCCACC GTGGTGGCGC AGAACATCCA GCACATCTTC
GCCGTCACCG AACAGACCGG CGAGGGCACC CGCTCGACCG CCCAGCTGGT GCGGCAGCTC
TCGCGCATCG CCGAGGAGCT GCGCCAGTCG GTGGCGCGCT TCAAGATCAG CTGA
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| Protein sequence | MSFLDKLKGF GKRNNDADLA DEVSYVDAYS IADDSTEMRD TVQDIGLHTT HAVPDAAIIS
EASPSGGASR YLNTRMPAGD SPGHAPAPGG GVRLPLIGHL SSDQQQRLLG SVLAVGVLGL
VLASVLAVRS AGGSAAQVGA TGQALMQSQR LAKSVLQAMV GHPPAFPEVR NAADVLARNV
RGLRDGGSVP GLEAAPLGAQ PLLEPLLPLV DKAEKNAKIV LAQEQVLTQV GTALRAIGKQ
STELLETAEA VAAFKVQQDA LPTDISAAGQ LVMLTQRIGK SASESLTVQG VSPEAVFLLG
KDLNTFHDLT RGLLDGSPEL RLTSSRDAPT RDRLQALLRA HEQLRTQAGV IVGNLQGLVS
AREAQTAIIA DSETLRAGLE EVQGALSAAG GMGWFNVLLI GASLLLGVIG GLGLLVVFTH
DQRQRAMMAD TQRHEAERQE REAKRVNDAN QAAILRLMNE LQSVAEGDLT QQATVTEDIT
GAIADSVNYT VEELRNLVSQ VQGTAARVTD TTQQVEATST ELLAASDEQL REIRETGEAV
LQMAGRIQRV SGQAQQSADV ARESLMAATS GLTAVLDTIT GMNTLRDQIQ DTSKRIKRLG
ESSQEIGEIT ELISDITEQT NVLALNAAIQ AASAGEAGRG FSVVAEEVQR LAERSGDATR
AIAVLVKTIQ TDTADAVAAM ERSTQGVVEG AKLSDNAGTA LAEIDRISRQ LAELIEEIAS
QARREADGAT VVAQNIQHIF AVTEQTGEGT RSTAQLVRQL SRIAEELRQS VARFKIS
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