Gene PCC8801_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3339 
Symbol 
ID7102998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp3485374 
End bp3488835 
Gene Length3462 bp 
Protein Length1153 aa 
Translation table11 
GC content46% 
IMG OID643476355 
Productmethyl-accepting chemotaxis sensory transducer with GAF sensor 
Protein accessionYP_002373465 
Protein GI218248094 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACA CTTCTCCTAA ATCCAATCCC CAAAATACCA ACGGCAAAAC ACCCATTCCT 
GGAAAGCCCA CTCACCATAA TAGTACAGGA TCTGAAACTG CCGAGGAATC GACTGCACCC
ATAACACCCA TCAGTGAAGT CAACCAACTG TCTACCGTCA TCACGGCTCC TAGATTAACC
TTACCTGTCA CCCATCGCAC GACTTCTCTC GATCCCTCAA AACTTCCCAA AACTTGGCGA
ACTCAACAAT TAGTTCAATG GTGGCAAAAA CTTAACCTCC GTTCTAAAAC CATTGTAGCT
GCCACGCTCA TGGGTGTGGT TCCTGTGGTT ATAGTTGGCT CAATTACCTA TGGAGTCGTT
CACCAAGGGT TAACTAAGCA AGTACTCCAA TTTGAAAGCA CCAATAACCA GGAATTGGGA
GCCTTAGTTA ACCGCTTTAT GCGCGATCGC TATTTTAATA TCCAAGAGCT GGCCACTTGG
GATATTTTTA CCAATCCTCA ATTACGCACT GCTAACGCCA AAAAATCCCA ACAGGCTGCT
TTAGATAACT TCATTAAAAT TTCTCCAATT TATGATAGTA TTGCCTTCTT TGATCTAACG
GGAAATGTTA TTAGTCAATC CCAAGGAACC CCCTTAAAAA ACCATCAAGA TCGCAGTTAT
TTCCAAGAAG CTCTTAAGAG TGGCAAAGCA GTTATTAGTC AACCGCTGCT CTCAGCTACA
GAAGGAACAG TTAATGTCTA TTTTGCAGCC CCAGTCAAAG ACAAATTTAG CGGCAAAATC
GTTGGGGTTG TGCGAGCTAG AATGCCCGTT AAATTTTTAC AAGAAATTGT TAAAAAAGAA
GCGGATTTAG GCGAAGTAAG TTACCTAATT AATAAAGATC AAGAAATTTT CCTCAGCTCT
AAAGGAATTT ATACGACCTC AATTAATAGT GCCGGAAAAA AGGATGAAAG AGGAGAACAA
TCTACTTATA AAGCTATTGA AGCCCAGCAG GAAATCAAAG CCTATGATAA GTTAGCCCAA
AAAAATCTTC CTTTGTCCAT CGAAGCAGGA GATAAACTTG TTGCTTTTGC CCCCTTAGGA
GAACTAGATG GCTTACCCAA TTTAGGCTGG AATGCCGTTA CTACCCTAGA CAAAAGTCTG
GTCTTTGCTC CTCAAAATCA ACTGCTCGCC GCCCTATTTT GGGGGACGTT ACTAACAGCA
GTCAGTGTTG GGGCGATCGC GGTTCTCTTA GCTGAACGCG CTACCCGTCC TCTGCGTCAA
ATGGTTAAAA CCGTCAAAAA AATTGGGGAG GGAAATTTGG AGGTTGAAGT TCCCATCCAA
GGACAAGATG AATTGGCTGT CCTTGGGAGT AGCCTCAATA GTATGACCCA ACGGTTGAAA
ACCTTGATTG ACCAACAATC CGTCTCCGTT GAAGAAGCAA AAGTTTTAGT TAAGGTAGCC
GGAACCGTTG TTAGCGATAG CCTAGGGTTC GATAAACTGG TCAATGAAGC CTTAGACCAA
GCCAAAACTA TTCTAAGGAC AGAACGGATC GTTGTCTATC AATTCGACCT CGATGGAGGA
AACGGCTATA TTTCCCACGA ATCCGTCAGT TTAGGCTATA GCAGTGCCTT CAATACGGAT
GTGGGCGATC GCTGCATCCC CCACCGCTTA CTCCAAGACT ATAAACAGGG ACGAATCGTA
GCAACCCCCG ATGTCTATCA AGCGGGATTT CACCCTGAAC ACCTAGCATT GATGGAACGG
TTAGGCATTA AAGCCAATCT CGTCGTTCCC ATTGTCCGTC CGGGTCAACT TTTTGGCCTG
TTGATTGCCC ATCACTGCCA ACAAAGCCAC CTTTGGCAAG AAAACGAAAT TATCTTCCTC
AAGAACTTAG CTGAACAATT TGCTACCAGC TTAGACCGTC TGAGGGTCAG GGAACAACGG
GAAAAAGATA ATCAGAAAGC CGAACAATTA AAGGAAATAA CCTTAAGAAT GGCTGCTGCT
GTCACGACGG AGAAGATTTT AGAGACTTGT GTCAATCAAG TACGTTCCTC CCTGAACAGC
GATCGTGTCA TTGTCTATCG CTTTGATGCC ACTTGGAATG GAACCATTAT CGCAGAATCC
GTTGCCGAGG AATTTCCCCG GGCTCTAGGA GCCGAAATTC GTGACCCTTG TTTTGCCCAA
CGCTATGTCG AAAAGTACAG ACAAGGACGA GTAGCAGCAA CTCCTGATAT CTATAATGCC
GGATTGACCC AGTGCCACTT AAAACAACTC GAACCCTTTC AAGTCAAAGC CAATTTAGTT
GCCCCAGTGT TACGCAAAGG AAAACTGTTA GGGTTATTAA TTACTCATCA GTGTTCAGGA
ACCCGTGACT GGGAACAAGG CGAAATTAAC TTCTTTTCTC AAGTTGCCAC CCAAGTTGGA
TTTGCCTTAG AACGGGCTGA TTTATTGGAA GGACAAAAAC TCGCCCAAGA AAAACAACGC
CAAGCCAAGG AAAAACTACA ACAACGAGCC TTAGAACTGC TGATGGAAGT TGATCCCGTT
AGCCGAGGCG ATCTCACCAT TCGTGCCCAT GTCACCGAGG ATGAAATTGG GACGATTGCC
GATTCCTATA ACGCCACCAT TGAAAACCTA CGGAAGATTG TAACCCAGGT GCAACAATCG
GCAGGAGTCG TTGCCAACAC CACCAATACC AATGAATCAG CCGTGCGGGC ACTGTCCGAA
GAATCCCACC GTCAGGCCGA AGAAATTGCA GCAGCCCTCG ATCGCTTGCA AGCCATGACC
CATTCTATTC GGGCAGTAGC AACCAATGCA GAACTCGCTC AAATGACCGT ACAACAAGCC
ACCCACACCG TAGAATCAGG GGAAGAAGCC ATGAATCGGA CGGTAGATGG GATTATGGCT
ATTCGGGAAA CCGTCGCTGA AACCGCCAAA AAAGTGAAAC GGTTAGGGGA ATCTTCGCAA
AAAATCTCGA AAGTCGTCAA CTTGATTAGT AGCTTTGCCG ATCAGACCAA CCTCTTAGCG
TTGAACGCTT CCATTGAAGC AGCCCACGCG GGAGAAGAAG GACGAGGCTT TGCGGTAGTT
GCATCAGAAG TGCGGTCCCT CGCCCGTCAA TCGGCCGAAG CCACGGCGGA AATTGAAGCC
CTAGTCGCCA GTATTCAAGC TGAAACCAAC GAGGTTGTGG CTGCCATGGA AGCAGGGACA
CAACAAGTCG TCACCGGGAC GAAATTAGTG GATGAAACGC GCAAGAGTCT GAACCAAATT
ACGGCAGCCA GTGTGCAAAT TACGGAATTA GTCGAAGCCA TTACCAAAGC TGCGGTAGAA
CAGTCAGCTA CGAGTCAATC GGTGACTCAA ACCATGACTG AAGTCGCGGC GATTTCTAAC
AAAACGTCTT CCGAAGCGGC ACAAGTTTCC GACTCCTTCA AACAACTGTT AGACGTGGCT
CAAACTCTGC AAGAAAGTGT GCGTCAGTTC AAAGTTCAAT AA
 
Protein sequence
MTHTSPKSNP QNTNGKTPIP GKPTHHNSTG SETAEESTAP ITPISEVNQL STVITAPRLT 
LPVTHRTTSL DPSKLPKTWR TQQLVQWWQK LNLRSKTIVA ATLMGVVPVV IVGSITYGVV
HQGLTKQVLQ FESTNNQELG ALVNRFMRDR YFNIQELATW DIFTNPQLRT ANAKKSQQAA
LDNFIKISPI YDSIAFFDLT GNVISQSQGT PLKNHQDRSY FQEALKSGKA VISQPLLSAT
EGTVNVYFAA PVKDKFSGKI VGVVRARMPV KFLQEIVKKE ADLGEVSYLI NKDQEIFLSS
KGIYTTSINS AGKKDERGEQ STYKAIEAQQ EIKAYDKLAQ KNLPLSIEAG DKLVAFAPLG
ELDGLPNLGW NAVTTLDKSL VFAPQNQLLA ALFWGTLLTA VSVGAIAVLL AERATRPLRQ
MVKTVKKIGE GNLEVEVPIQ GQDELAVLGS SLNSMTQRLK TLIDQQSVSV EEAKVLVKVA
GTVVSDSLGF DKLVNEALDQ AKTILRTERI VVYQFDLDGG NGYISHESVS LGYSSAFNTD
VGDRCIPHRL LQDYKQGRIV ATPDVYQAGF HPEHLALMER LGIKANLVVP IVRPGQLFGL
LIAHHCQQSH LWQENEIIFL KNLAEQFATS LDRLRVREQR EKDNQKAEQL KEITLRMAAA
VTTEKILETC VNQVRSSLNS DRVIVYRFDA TWNGTIIAES VAEEFPRALG AEIRDPCFAQ
RYVEKYRQGR VAATPDIYNA GLTQCHLKQL EPFQVKANLV APVLRKGKLL GLLITHQCSG
TRDWEQGEIN FFSQVATQVG FALERADLLE GQKLAQEKQR QAKEKLQQRA LELLMEVDPV
SRGDLTIRAH VTEDEIGTIA DSYNATIENL RKIVTQVQQS AGVVANTTNT NESAVRALSE
ESHRQAEEIA AALDRLQAMT HSIRAVATNA ELAQMTVQQA THTVESGEEA MNRTVDGIMA
IRETVAETAK KVKRLGESSQ KISKVVNLIS SFADQTNLLA LNASIEAAHA GEEGRGFAVV
ASEVRSLARQ SAEATAEIEA LVASIQAETN EVVAAMEAGT QQVVTGTKLV DETRKSLNQI
TAASVQITEL VEAITKAAVE QSATSQSVTQ TMTEVAAISN KTSSEAAQVS DSFKQLLDVA
QTLQESVRQF KVQ