Gene PXO_01605 details

Gene Information

• Locus tag: PXO_01605
• ID: 6306707
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 3303892
• End bp: 3305928
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642640460
• Product: pilus biogenesis protein
• Protein accession: YP_001914317
• Protein GI: 188577388
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.128934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACCG CCCCGGACGC CCGCAAGACC AACAAGCTCG GCAGCGTCAG CACCAGCTTC 
TGGCTTGGCT TGCTGGTGTT GTCGATGATC GTGTTTGGCG CCAACACCGG CGTCGCGACC 
TGGCAGAGCA GTCATCTTGC CGGCGCCGGT GTTAGCGCGG CCGACTTGCA GGTGCTTTCG 
CAGCAGCTGG CTAACCAGGG CCGCGAAGCG GTCTCCGGCG ACACTAAGGC ATTTGCCGCG 
TTCAAGGAGA CCAAGGGCCG CATCGACAGC ACGGTCAACG ATCTGGATGG CCGTTACGGC 
CAGGAAGGCC CGATCGCCAG CTCGATGTCG CAGCTCAAGG CGACCTGGGT GCCGCTGAGC 
AAGAACGCCG ATCAGGTCAT CGCCAGCGAA CAGGCGGTGC TGGCGATCGC AGTCAACGCC 
AACCGCTTCT CCGGCAGCGT CCCGCAATTG CAGGCGCAGT TGAACGAAGT GGTGCGTGCG 
ATGACCGTCA GCGGCGCGCC GGCTTCGCAG ATCTACAACA CCTTGCAGCA GGTCGTGGTA 
GCCGGAACCA TGGCGCGGCG GGTGACCGAA ATCCGCGCCG GCGAAGACGA TGCGGTCGCG 
TCCGGCGACG CGCTGGCACG CGACTCGGTG GTGTTCACGC AGATGCTCGA AGGCTTGCGC 
GCAGGCAACG AGGAACTCGG CATCGCCGCG GTCCGAAACC CGGCCGCGTT GTCGGCGCTG 
GAACAGTCGC AGGCCCAGTG GACGAGGATG AAGAGGGACG TCGACGCCAT CCTCGCCAAC 
TCGCGCAACC TGTTTGCCGC GCAGTCCTCG GCTGCCGCGC TGACGGCTGG CTCCAGCAAG 
ATGCTCGACG ACAGCAAGAA GCTGTTCGAT GCGTTCTCTT CGTTCGGTTC GGTGCGCGAC 
ACGCGCCTGT TCCCGAACTT CTGGCTGGGC GTGGTGTCCG GCCTGGTCGC GCTGCTGGCG 
ATCATCGGCT TCGTGTGGAG CTCGGTGCGC GTGCGGACCC GCGAGCAGGA CGTGCGCTAC 
CAGTCGCAGG TGGAATTCAA CAGCCGCAAC CAGCAGGCGA TTATGCGGTT GCTGGACGAA 
ATCAGCTCGC TCGGTGAGGG TGACCTGACG GTGAAAGCCT CGGTGACCGA GGACATGACC 
GGTGCCATCG CCGACGCCAT CAACTACGCC GTGGACGAAC TGCGCCACCT GGTGACCACC 
ATCAACGACA CCTCAGCCAA AGTGGCCGTG TCGACCCAGG AAACCCAGGC CACGGCCATG 
CAGCTGGCCG AAGCGGCCGG CCAGCAGGCC AACCAGATCA CCACTGCTTC CGAGCGCATC 
AGCGAAATCG CTGCCAGCAT CGAACAGGTG TCGCGCAACT CCACCGAGTC GGCCGAAGTG 
GCGCAGCGCT CGGTGGTCAT CGCCGCCGAA GGTGCCGGCG TGGTGCGCGA GACGATTCAG 
GGCATGGATC AGATTCGCGA CCAGATCCAG GAAACCTCCA AGCGCATCAA GCGGCTGGGC 
GAATCCTCGC AGGAAATCGG CTCGATCGTG GAACTGATCA ACGACATTTC CGAGCAGACC 
AACATCCTGG CGCTCAACGC TGCGGTGCAG GCAGCATCGG CCGGCGAGGC CGGCCGCGGT 
TTCGCCGTGG TGGCCGACGA AGTGCAGCGC CTGGCAGAAC GCACCTCCAG TGCGACCCGA 
CGCATCGAAG GTCTGGTGCA GACCATTCAG GCCGATACCA ACGAAGCGGT CAGCTCGATG 
GAGCAGACCA CCTCCGAAGT GGTGTCCGGT GCGCGCCTGG CCGAAGACGC CGGCACCGCG 
CTGACCGAAA TCGAGCGCGT GTCCAACGCC TTGAATAACC TGATTAAGAA CATCTCCATC 
GCCGCGCACC AGCAGTCGGC CGCGGCGACG GATATCACAC AGACCATGGG CGTGATCCGT 
CAGATCACCA GCCAGACATC GCAGGGTGCG GAGCAGACGG CCGAATCGAT CGGCAACCTG 
GCTCAGCTCG CTGCCGATCT GCGCCGTTCG GTCGCCGACT TCAAGCTGCC GGCGTGA 

 

Protein sequence

MSTAPDARKT NKLGSVSTSF WLGLLVLSMI VFGANTGVAT WQSSHLAGAG VSAADLQVLS 
QQLANQGREA VSGDTKAFAA FKETKGRIDS TVNDLDGRYG QEGPIASSMS QLKATWVPLS 
KNADQVIASE QAVLAIAVNA NRFSGSVPQL QAQLNEVVRA MTVSGAPASQ IYNTLQQVVV 
AGTMARRVTE IRAGEDDAVA SGDALARDSV VFTQMLEGLR AGNEELGIAA VRNPAALSAL 
EQSQAQWTRM KRDVDAILAN SRNLFAAQSS AAALTAGSSK MLDDSKKLFD AFSSFGSVRD 
TRLFPNFWLG VVSGLVALLA IIGFVWSSVR VRTREQDVRY QSQVEFNSRN QQAIMRLLDE 
ISSLGEGDLT VKASVTEDMT GAIADAINYA VDELRHLVTT INDTSAKVAV STQETQATAM 
QLAEAAGQQA NQITTASERI SEIAASIEQV SRNSTESAEV AQRSVVIAAE GAGVVRETIQ 
GMDQIRDQIQ ETSKRIKRLG ESSQEIGSIV ELINDISEQT NILALNAAVQ AASAGEAGRG 
FAVVADEVQR LAERTSSATR RIEGLVQTIQ ADTNEAVSSM EQTTSEVVSG ARLAEDAGTA 
LTEIERVSNA LNNLIKNISI AAHQQSAAAT DITQTMGVIR QITSQTSQGA EQTAESIGNL 
AQLAADLRRS VADFKLPA