Gene Daro_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3896 
Symbol 
ID3567741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4191304 
End bp4193424 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content57% 
IMG OID637682370 
Productchemotaxis sensory transducer 
Protein accessionYP_287094 
Protein GI71909507 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCA GCTTCAAGTT TCCGAAAATT GGCGATGCCG GGAAGGCCGT GGCTTCGCCC 
ATGACCGTTT CAGCCGAAGG TGTCCCAACC GCCAAATTGG CATTGCCTGG TTTCCTGGCA
GGGAAACCGG TTATCCAGCA GATGAAAATG CTGGGCGGAA TTTTCGTTGC CCTGCTGTTG
TTGATTGCCG CCCTGGTTTT TCATGACAAC CGTGAATCGA CACACAATAC CGCCTACATT
GCGGCATCCG GCGAAATGCG CATGCTCTCT CAGCGGCTGG CCAAGGCTTC GTCGCTGGCT
CTCCAGGGTA ACGCTGTCGC CTTCGGTCAA CTGAAGGAAT CTCGCGATAC CTTCGCCAGG
CTCCTTGAGC AACTGACCAA CGGCGGTGAA ATTGGCAACG TTAGCGTTCC TGCTTCACCG
AGCGATGTTC GCCCTCAGTT GGACACACTC GCCCAGCGCT GGGTTTCGAC CGACAAGGAC
TCGGAAACCG TGATTGGCCA GGAAAAGAAC CTGGTTGCAT TGGGTAAGAG CGTGGCACTG
ATCGACAACA ATAATGCCAC CATGCTTGAG TTGACCGAGC AGATTGCCAC GTTGAAATTG
CAGTCTGGTG CAGCATCGCG TGAAATTGCT GCGGCTAACC AGTTGGTCAT GCTGACGCAG
CGGATTGCCA AGAATGCTTC TGCGCTGCTC GTCGGTAATG AAATCAATCC TGAAGTGGCC
TTTCTGCTCG GCAAGGATAC CAACGCCTTC CGCGACATCC TCGGTGGCTT GACCAAGGGT
GGCGCCGATG CGGACACGCG CGCCAAGCTG GACGAACTGG ACGGCGCTTT CAAGGAGTAT
CAGGGCGCTA TTGCCAGTAT TCTCGGCAAC ATGCAGCCGC TGGTTCTCTC CAAGCAGGCC
GGTTCACGCA TTTTCCGCGA GAGTGAGGAT CTGCTGAAGG CGACGGACGA GCTGGCACAG
GGTTATCAGA GTGCATTGTC TGAGCGTGCG CTCTATATCG TCCTGCTGAT TGTGCTGACA
CTCGTCGCAG TTGCGGTACT GGCGCTGCTG GCCAAAATCT ACCTCAACGA TACTGAGCGT
CGTGCTGAAG CAGCTGAACA GCAGCGGCAT GCGGCTGACC AGACCAATCG CGACAATCAG
GACGCTATTT TGCGCCTGAT GAACGAACTG GGTGACTTGG CTGACGGTGA CTTGACCGTA
ACAGCGACCG TGAGCGAGAA CATCACGGGC GCCATCGCCG ACTCGATCAA CTACACCATT
GAAGAACTTC GTGTGCTGGT CGGCCGGATC AACGATGCGG CGAATCGCGT GACGGCTGCG
ACAGAAATTG CCCGCTTGAA CTCGGCACAA CTGCTTGACG CTGCCGAGCG GCAATCGACC
GAAATTCAGG AAGCGGGTCA GTCAGCGCTG GAAATGGCGC GCTCGATGAC CGAAGTGTCC
GGCAGTGCAA CCCAGTCTGC CCAGGTTGCC CGGCAATCGC TGACAGCAGC TGAGAAGGGT
ACGCAAGCCG TGCAGGATTC CATCAAGGGT ATGAATGAAA TTCGTAACCA GATTCAGGAA
ACCTCGAAGC GGATCAAGCG ACTCGGTGAA AGCTCCCAGG AGATCGGTGA AATCGTGGAA
CTGATTTCCG ATATTACCGA ACAGACCAAC GTTCTGGCCT TGAACGCTGC TATCCAGGCG
GCCTCCGCCG GTGATGCAGG CCGCGGCTTC ACGGTGGTTG CCGAGGAAGT GCAGCGACTG
GCTGAACGTT CCGCCGAAGC TACCAAGCAG ATTGCGGCGA TTGTGAAGAC CATTCAGACC
GATACTCAGG ATGCTGTTTC GGCTATGGAA CAGTCGACCC GAGGCGTGGT TGAAGGGGCC
AAACTTTCTG ATGCGGCCGG TCAGGCACTG TCCGAAATCG GTCAGGTGTC GCGCGACCTT
GCCGAACTGA TTCAGGATAT TTCGAGTTCG ACGCAGAACC AGGCCGATTC GGCTACGCAG
GTGGCGCGTC TGATGCAGGA CATTCTTCAC GTGACAGAAC AAACGACGGC CGGCACGCAG
CGTACTGCTG AGGCTGTTGA CGAACTGACC GCACTGGCTT CCGAACTGAA GGGTTCCGTC
GCTGGCTTCA AGGTGGATTG A
 
Protein sequence
MAFSFKFPKI GDAGKAVASP MTVSAEGVPT AKLALPGFLA GKPVIQQMKM LGGIFVALLL 
LIAALVFHDN RESTHNTAYI AASGEMRMLS QRLAKASSLA LQGNAVAFGQ LKESRDTFAR
LLEQLTNGGE IGNVSVPASP SDVRPQLDTL AQRWVSTDKD SETVIGQEKN LVALGKSVAL
IDNNNATMLE LTEQIATLKL QSGAASREIA AANQLVMLTQ RIAKNASALL VGNEINPEVA
FLLGKDTNAF RDILGGLTKG GADADTRAKL DELDGAFKEY QGAIASILGN MQPLVLSKQA
GSRIFRESED LLKATDELAQ GYQSALSERA LYIVLLIVLT LVAVAVLALL AKIYLNDTER
RAEAAEQQRH AADQTNRDNQ DAILRLMNEL GDLADGDLTV TATVSENITG AIADSINYTI
EELRVLVGRI NDAANRVTAA TEIARLNSAQ LLDAAERQST EIQEAGQSAL EMARSMTEVS
GSATQSAQVA RQSLTAAEKG TQAVQDSIKG MNEIRNQIQE TSKRIKRLGE SSQEIGEIVE
LISDITEQTN VLALNAAIQA ASAGDAGRGF TVVAEEVQRL AERSAEATKQ IAAIVKTIQT
DTQDAVSAME QSTRGVVEGA KLSDAAGQAL SEIGQVSRDL AELIQDISSS TQNQADSATQ
VARLMQDILH VTEQTTAGTQ RTAEAVDELT ALASELKGSV AGFKVD