| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5031 |
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| Symbol | pilJ |
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| ID | 1186716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5733209 |
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| End bp | 5735251 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396352 |
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| Product | type IV pilus biogenesis protein PilJ |
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| Protein accession | NP_794764 |
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| Protein GI | 28872145 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTA CAGACAGGTC AAGGGAAGGT GCACGAAGCC GTACGCAGAT TATTCTGCTG
TTCGTCGCGT TGATTGTTTT CATCATGTTG CTGTTCGCCA ACTTCGCGTA CCTCAATACT
CAGTCGAACT ACGACAAGCA GTACATCGGG CATGCCGGTG AGCTGCGCGT GCTGTCCCAG
CGCATCGCCA AGAACGCCAC GGAAGCGGCT GCCGGCAAAA CCCAGGCGTT CAAATTGCTG
GCCGATGCGC GCAACGATTT CGACGTGCGC TGGGGCTACC TGAGAAAAGG CGACCCGGCC
ACCGGGCTGC CTGCGGCTCC CGAGCTGATA CGCGACGAAT TGCGCACCGT GCAACGAGAC
TGGGAAGGGC TGCGCAAGAG TACCGACGTG ATTCTGGCCA GCGAGCAGAC CGTCCTTTCG
CTGCATCAGG TGGCGGCGAC CCTGGCCGAA ACCATTCCGC AGTTGCAGGC CGAATACGAC
AAGGTCGTCG AAAACCTTCT GCAAAGTCGT GCGCCTGCTG CGCAGGTCGT GGTCGCGCAA
CGTCAGGCGC TGCTCGCCGA GCGGATTCTC GGTTCGGTCA ACACCGTACT GGCTGGCGAC
GAAACAGCGG TGCAGGCCGC CGATGCCTTT GGCCGTGACG CCAGCCAGTT TGGCCGGGTG
CTTAACGGCA TGCTGGAAGG CAATGCGACG CTGCGCATCA CCCAGGTCGA AGATCGCGAT
GCCCGGGCGC GGCTGGCGGA AATCGCCGAG CTGTTCGAGT TCGTGTCCGG CTCGGTGGAC
GAAATCCTCG AAACCTCGCC CGAGCTTTAT CAGGTGCGCG AGGCCTCGGG CAACATCTTC
AACACCTCGC AGACCCTGCT GGACGAAACC TCGGTGCTCG CCAACAGCTT GGAAAACCTC
GCCAAACGCC GCACCATGAA CACCGTCGGC GGTTATGTGC TGGGCTTGCT GGCGCTGATG
TCGATCATCC TCATCGGGCT GGTCATGGTT CGCGAAACCA ACCGCCAGTT GCGCGAAACC
GCTCAGAAGA GCGAGCGCAA TCAGACGGCG ATCATGCGTC TGCTGGACGA GATCGAAAAC
CTCGCCGACG GCGATCTGAC CGTGACGGCT TCTGTTACCG AGGACTTCAC CGGTGCGATT
GCCGACTCCA TCAACTACTC CATCGATCAA CTGCGCGAAC TGGTGGTGAC CATCAACCTG
ACGGCCGAAC AGGTGGCCTC GGCCGTCACC GAGACCCAGG CCACGGCCAT GCAGTTGTCT
GCCGCGTCCG AGCATCAGGC CTTGCAGATC AGCGCGGCCT CCACGGCGGT CAACGACATG
GCGGCATCGA TTGATCAGGT GTCGGCCAAT GCGTCGGAGT CCTCGGCGGT TGCCGAGCGT
TCGGTGGCAA TTGCCAACAA AGGCAACGAG GTGGTGCAGA ACACCATCCA CGGCATGGAC
AACATTCGCG AACAGATTCA GGACACGTCC AAGCGCATCA AACGCTTGGG TGAGTCTTCG
CAGGAAATTG GCGACATTGT CAGCCTGATC GACGACATTG CTGATCAAAC CAACATTCTT
GCGCTCAACG CGGCCATTCA GGCGTCGATG GCCGGTGATG CCGGGCGAGG CTTTGCGGTG
GTGGCTGACG AAGTGCAGCG GCTGGCGGAG CGTTCCTCGT CGGCGACCAA ACAGATCGAG
ACGCTGGTGC GCGCCATCCA GAACGACACC AATGAAGCAG TGATCTCCAT GGAGCAGACC
ACCAGCGAAG TGGTGCGCGG CGCGCGGCTG GCGCAGGATG CTGGCGTAGC ACTCGGGGAA
ATCGAAGGCG TTTCCAGGGT GCTGGCCGAA CTGATCGAAA GTATCACCGA TGCAGCCCAT
CAGCAGGCCG AGTCTGCCGG TCAGATCTCG CAGACCATGA CCGTGATTCA GCAGACCACT
TCGCAGACCA CGTCCGGCAC GTCGGCCACC GCCGAAAGCA TTGGCAATCT GGCGAAGATG
GCCAGCGAAA TGCGTCGCTC GGTATCGGGT TTCACCCTGC CGCCCTCGAA GAAGATCGGA
TGA
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| Protein sequence | MSSTDRSREG ARSRTQIILL FVALIVFIML LFANFAYLNT QSNYDKQYIG HAGELRVLSQ
RIAKNATEAA AGKTQAFKLL ADARNDFDVR WGYLRKGDPA TGLPAAPELI RDELRTVQRD
WEGLRKSTDV ILASEQTVLS LHQVAATLAE TIPQLQAEYD KVVENLLQSR APAAQVVVAQ
RQALLAERIL GSVNTVLAGD ETAVQAADAF GRDASQFGRV LNGMLEGNAT LRITQVEDRD
ARARLAEIAE LFEFVSGSVD EILETSPELY QVREASGNIF NTSQTLLDET SVLANSLENL
AKRRTMNTVG GYVLGLLALM SIILIGLVMV RETNRQLRET AQKSERNQTA IMRLLDEIEN
LADGDLTVTA SVTEDFTGAI ADSINYSIDQ LRELVVTINL TAEQVASAVT ETQATAMQLS
AASEHQALQI SAASTAVNDM AASIDQVSAN ASESSAVAER SVAIANKGNE VVQNTIHGMD
NIREQIQDTS KRIKRLGESS QEIGDIVSLI DDIADQTNIL ALNAAIQASM AGDAGRGFAV
VADEVQRLAE RSSSATKQIE TLVRAIQNDT NEAVISMEQT TSEVVRGARL AQDAGVALGE
IEGVSRVLAE LIESITDAAH QQAESAGQIS QTMTVIQQTT SQTTSGTSAT AESIGNLAKM
ASEMRRSVSG FTLPPSKKIG
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