More than 300 homologs were found in PanDaTox collection
for query gene Oter_2939 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_2939  response regulator receiver protein  100 
 
 
125 aa  253  6e-67  Opitutus terrae PB90-1  Bacteria  normal  0.302842  normal 
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  42.86 
 
 
452 aa  88.2  4e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2247  response regulator receiver protein  39.81 
 
 
119 aa  84.3  5e-16  Methanosphaerula palustris E1-9c  Archaea  normal  0.135382  normal  0.142459 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  38.84 
 
 
457 aa  82.4  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  42.02 
 
 
451 aa  82.4  0.000000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_3151  response regulator receiver protein  38.53 
 
 
120 aa  81.6  0.000000000000003  Natrialba magadii ATCC 43099  Archaea  normal  0.276361  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  38.02 
 
 
456 aa  80.5  0.000000000000006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0960  response regulator receiver protein  38.53 
 
 
120 aa  80.1  0.000000000000009  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011899  Hore_10620  response regulator receiver protein  41.18 
 
 
122 aa  80.1  0.00000000000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00212992  n/a   
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  42.06 
 
 
454 aa  79.3  0.00000000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  40.34 
 
 
454 aa  79.7  0.00000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_002939  GSU3198  chemotaxis protein CheY  38.02 
 
 
121 aa  79  0.00000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1438  response regulator receiver protein  31.36 
 
 
118 aa  79  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0726214  normal  0.0482802 
 
 
-
 
NC_013512  Sdel_1980  response regulator receiver  39.82 
 
 
126 aa  79.3  0.00000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3195  response regulator receiver protein  34.71 
 
 
121 aa  79  0.00000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.595667  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  36.36 
 
 
457 aa  78.2  0.00000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3314  response regulator receiver protein  37.86 
 
 
124 aa  78.6  0.00000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2807  two component, sigma54 specific, Fis family transcriptional regulator  38.46 
 
 
466 aa  78.6  0.00000000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.75933  n/a   
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  41.88 
 
 
460 aa  77.4  0.00000000000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0751  two component, sigma54 specific, Fis family transcriptional regulator  38.79 
 
 
485 aa  77.4  0.00000000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0880271  normal 
 
 
-
 
NC_009051  Memar_0945  response regulator receiver protein  38.46 
 
 
120 aa  77.8  0.00000000000005  Methanoculleus marisnigri JR1  Archaea  normal  0.0428151  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  35.77 
 
 
468 aa  77.4  0.00000000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_011146  Gbem_3097  diguanylate cyclase  37.93 
 
 
458 aa  77  0.00000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  0.948135  n/a   
 
 
-
 
NC_007796  Mhun_0315  response regulator receiver domain-containing protein  33.33 
 
 
122 aa  77.4  0.00000000000007  Methanospirillum hungatei JF-1  Archaea  normal  0.48267  normal  0.327834 
 
 
-
 
NC_013205  Aaci_1404  response regulator receiver protein  40 
 
 
119 aa  77  0.00000000000007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1858  response regulator receiver protein  35.9 
 
 
120 aa  76.6  0.00000000000009  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1338  response regulator receiver protein  36.52 
 
 
120 aa  76.6  0.00000000000009  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.376219 
 
 
-
 
NC_011146  Gbem_2935  response regulator receiver protein  37.29 
 
 
125 aa  76.6  0.00000000000009  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00116443  n/a   
 
 
-
 
NC_012918  GM21_1165  diguanylate cyclase  37.07 
 
 
459 aa  76.3  0.0000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000192138 
 
 
-
 
NC_011891  A2cp1_2398  two component, sigma54 specific, transcriptional regulator, Fis family  34.15 
 
 
469 aa  76.3  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.313034  n/a   
 
 
-
 
NC_011145  AnaeK_2310  two component, sigma54 specific, transcriptional regulator, Fis family  34.15 
 
 
469 aa  76.3  0.0000000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.294968  n/a   
 
 
-
 
NC_007796  Mhun_0126  response regulator receiver domain-containing protein  40.57 
 
 
120 aa  76.3  0.0000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_2684  response regulator receiver domain-containing protein  35.34 
 
 
121 aa  76.3  0.0000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.183474 
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  38.14 
 
 
223 aa  76.6  0.0000000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  40.17 
 
 
515 aa  75.9  0.0000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007760  Adeh_1555  two component, sigma54 specific, Fis family transcriptional regulator  34.15 
 
 
467 aa  75.9  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21045  n/a   
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  40.19 
 
 
453 aa  75.5  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  35.59 
 
 
120 aa  76.3  0.0000000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1885  response regulator receiver protein  36.52 
 
 
1066 aa  75.5  0.0000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.166704  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  36.07 
 
 
480 aa  75.9  0.0000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_009616  Tmel_0460  response regulator receiver protein  48.15 
 
 
119 aa  75.1  0.0000000000003  Thermosipho melanesiensis BI429  Bacteria  normal  0.903697  n/a   
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  39.66 
 
 
461 aa  75.1  0.0000000000003  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  36.44 
 
 
456 aa  75.1  0.0000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1771  response regulator receiver protein  38.26 
 
 
117 aa  75.1  0.0000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0237  response regulator receiver protein  35.96 
 
 
119 aa  75.5  0.0000000000003  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.390769  normal  0.929667 
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  36.44 
 
 
456 aa  75.5  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_013158  Huta_0953  response regulator receiver protein  35.65 
 
 
119 aa  75.1  0.0000000000003  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0255772  n/a   
 
 
-
 
NC_013501  Rmar_2408  PAS/PAC sensor hybrid histidine kinase  38.98 
 
 
647 aa  75.5  0.0000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.385618  n/a   
 
 
-
 
NC_011830  Dhaf_4841  response regulator receiver protein  34.19 
 
 
118 aa  75.1  0.0000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.202718  n/a   
 
 
-
 
NC_008609  Ppro_1380  response regulator receiver modulated diguanylate cyclase  35.34 
 
 
454 aa  75.1  0.0000000000003  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00781234  n/a   
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  41.12 
 
 
453 aa  74.7  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  39.83 
 
 
239 aa  74.7  0.0000000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_007955  Mbur_0359  CheY like protein  38.32 
 
 
120 aa  74.7  0.0000000000004  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0502207  n/a   
 
 
-
 
NC_009718  Fnod_0692  response regulator receiver protein  35.59 
 
 
119 aa  74.3  0.0000000000005  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0531  response regulator receiver protein  35.29 
 
 
120 aa  74.3  0.0000000000005  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4223  response regulator receiver protein  35.04 
 
 
321 aa  74.3  0.0000000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.848837 
 
 
-
 
NC_012918  GM21_1289  response regulator receiver protein  35.59 
 
 
125 aa  74.3  0.0000000000005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.97319e-30 
 
 
-
 
NC_013517  Sterm_2773  response regulator receiver protein  36.45 
 
 
120 aa  74.3  0.0000000000005  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2955  two component, sigma54 specific, Fis family transcriptional regulator  36.29 
 
 
460 aa  74.3  0.0000000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.66681 
 
 
-
 
NC_013526  Tter_2194  PAS/PAC sensor hybrid histidine kinase  35.96 
 
 
1363 aa  74.3  0.0000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3217  sigma-54 dependent DNA-binding response regulator  32.76 
 
 
501 aa  73.6  0.0000000000008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0161  response regulator receiver domain-containing protein  37.93 
 
 
169 aa  73.6  0.0000000000009  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  36.36 
 
 
461 aa  73.6  0.0000000000009  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  38.26 
 
 
470 aa  72.8  0.000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_007517  Gmet_1914  response regulator receiver modulated diguanylate cyclase  32.76 
 
 
459 aa  73.2  0.000000000001  Geobacter metallireducens GS-15  Bacteria  normal  0.943888  hitchhiker  0.00021307 
 
 
-
 
NC_007796  Mhun_3035  response regulator receiver domain-containing protein  33.91 
 
 
127 aa  73.2  0.000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008148  Rxyl_2673  response regulator receiver modulated serine phosphatase  36.21 
 
 
389 aa  73.2  0.000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2877  response regulator receiver protein  33.62 
 
 
118 aa  73.2  0.000000000001  Natrialba magadii ATCC 43099  Archaea  normal  0.412079  n/a   
 
 
-
 
NC_008609  Ppro_3079  two component, sigma54 specific, Fis family transcriptional regulator  38.6 
 
 
480 aa  72.8  0.000000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00177638  n/a   
 
 
-
 
NC_011726  PCC8801_0928  response regulator receiver protein  33.04 
 
 
125 aa  72.8  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_2554  type 4 fimbriae expression regulatory protein PilR  34.75 
 
 
452 aa  72.4  0.000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3003  two component Fis family transcriptional regulator  38.68 
 
 
465 aa  72.4  0.000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0697126  n/a   
 
 
-
 
NC_012029  Hlac_0694  response regulator receiver protein  35.29 
 
 
119 aa  72.4  0.000000000002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  36.97 
 
 
476 aa  72.4  0.000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1886  diguanylate cyclase  35.34 
 
 
462 aa  72  0.000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3210  response regulator receiver protein  36.36 
 
 
124 aa  72  0.000000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0955  response regulator receiver protein  33.04 
 
 
125 aa  72.8  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0623  response regulator receiver protein  41.32 
 
 
121 aa  72.4  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0228  response regulator receiver protein  39.09 
 
 
120 aa  72.4  0.000000000002  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012029  Hlac_2561  response regulator receiver protein  35.78 
 
 
118 aa  72.4  0.000000000002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.221839  normal 
 
 
-
 
NC_009486  Tpet_0230  response regulator receiver protein  39.09 
 
 
120 aa  72.4  0.000000000002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  36.54 
 
 
221 aa  71.6  0.000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal 
 
 
-
 
NC_002939  GSU1658  response regulator/GGDEF domain-containing protein  31.9 
 
 
458 aa  71.6  0.000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.939598  n/a   
 
 
-
 
NC_009523  RoseRS_2346  histidine kinase  40 
 
 
372 aa  71.6  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1042  two component signal transduction response regulator  34.19 
 
 
465 aa  71.6  0.000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.472622  n/a   
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  37.82 
 
 
125 aa  71.6  0.000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_007517  Gmet_3211  response regulator receiver domain-containing protein  35 
 
 
122 aa  72  0.000000000003  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000000000097826 
 
 
-
 
NC_011891  A2cp1_1183  two component, sigma54 specific, transcriptional regulator, Fis family  37.61 
 
 
481 aa  71.6  0.000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  43.36 
 
 
200 aa  71.6  0.000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3444  response regulator receiver protein  35.85 
 
 
120 aa  72  0.000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011769  DvMF_1461  two component, sigma54 specific, transcriptional regulator, Fis family  36.07 
 
 
491 aa  72  0.000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.750458 
 
 
-
 
NC_008609  Ppro_0087  response regulator receiver protein  38.39 
 
 
123 aa  71.6  0.000000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  39.25 
 
 
394 aa  71.6  0.000000000003  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  35.04 
 
 
444 aa  71.2  0.000000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  34.45 
 
 
137 aa  71.6  0.000000000004  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2715  response regulator receiver modulated diguanylate cyclase  37.62 
 
 
314 aa  71.2  0.000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1055  two component, sigma54 specific, Fis family transcriptional regulator  37.61 
 
 
481 aa  71.2  0.000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.874499  n/a   
 
 
-
 
NC_011145  AnaeK_1114  two component, sigma54 specific, transcriptional regulator, Fis family  37.61 
 
 
501 aa  71.2  0.000000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4715  two component LuxR family transcriptional regulator  38.84 
 
 
196 aa  71.2  0.000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2193  two component transcriptional regulator, winged helix family  37.4 
 
 
237 aa  71.2  0.000000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0620475  n/a   
 
 
-
 
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