Gene RoseRS_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2346 
Symbol 
ID5209313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2902794 
End bp2903912 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content55% 
IMG OID640595951 
Producthistidine kinase 
Protein accessionYP_001276675 
Protein GI148656470 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACGG AAATATGTGA CATGATAGAA GAGCGGGCAG CTATCAAAAA TCTGATGTTT 
ACACGCGAGA TTTCCAGTGT TCCGCGTATG GTTCTGGGGG ATGAGCGACG TCTGCGTCAG
GTTTTGGTAA ATCTGCTGAG CAATGCGGTC AAATTTACGC GACAGGGGTC GGTTGCGCTG
CGTGTTATGG GTTCGCCCGA TGCACAAACG CGAATTCGTT TTCAGGTTTC GGATACCGGC
ACCGGAATAG CGCCAGAACA TCTGGAGATC ATCTTCAAAC CGTTCGAGCA ACTGGGGGCG
CAGACCGGAG AGCAGGGCTC AGGGTTGGGA CTGGCGATTT CGCGTGAACT GGTTGCGCTT
ATGGGAGGAA CGCTCCAGGT GCAGAGTGAA CCGGGGCGCG GCAGCGTTTT CTGGTTTGAT
ATTCCGCTCC CGGCGGTGGA TCGCGAACCT TTCCCCGCTG TGCAATCCAG GGGGCGTGTC
ATTGGCGTGG ACGGTCAATC CCCTACAGTC CTGGTCGTCG ATGATCACGC TGATAATCGC
GTTATTGTGC GGGACATGCT GCAACCGCTG GGTTTCATTG TGGCAGAGGC GTGCGATGGT
CTGGAAGGAT TGGCGCAGAT TGAAGCATTC AAACCGGACG TGGTCATTCT GGACCTGGTG
ATGCCAGCAT TGAATGGATT GGATATGATC CGCAGGATCC GCCAGATGAC CGGTCACGAT
CATCTCGTGG TGATCGTCAG TTCTGCCAGT GCGTACCCTG ACGACCGCAT TCAAAGCCTG
AACGCTGGTG CGCAGGCATT CATTCCGAAA CCGATCAGCC GCTCACTGTT GGTCGAGACG
CTTCAGCGCC ATATCCCCTG GATTGAGTGG CGTTACGATA AACCGTTACC CGATGTTCAA
TCTGATCACT CCGATGCCCT GCCGCCGGAA ACGACGCTCA CCGTCCTGAG CGACCTGGCG
CAGATTGGTG ATGTCGATGC GCTGTACGAT GCAATCGATC GACTGAAACA GGACATGCCG
CAGGTTGTGT CGTTTATCGG AAAAGTGCAG TATTTCCTCG ATACGTTTCA GATCGGTCAG
TTGCAGACCT TTCTGGAACA GATGAGAGCC CGGCGATGA
 
Protein sequence
MITEICDMIE ERAAIKNLMF TREISSVPRM VLGDERRLRQ VLVNLLSNAV KFTRQGSVAL 
RVMGSPDAQT RIRFQVSDTG TGIAPEHLEI IFKPFEQLGA QTGEQGSGLG LAISRELVAL
MGGTLQVQSE PGRGSVFWFD IPLPAVDREP FPAVQSRGRV IGVDGQSPTV LVVDDHADNR
VIVRDMLQPL GFIVAEACDG LEGLAQIEAF KPDVVILDLV MPALNGLDMI RRIRQMTGHD
HLVVIVSSAS AYPDDRIQSL NAGAQAFIPK PISRSLLVET LQRHIPWIEW RYDKPLPDVQ
SDHSDALPPE TTLTVLSDLA QIGDVDALYD AIDRLKQDMP QVVSFIGKVQ YFLDTFQIGQ
LQTFLEQMRA RR