More than 300 homologs were found in PanDaTox collection
for query gene Franean1_5689 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_5689  binding-protein-dependent transport systems inner membrane component  100 
 
 
254 aa  484  1e-136  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2797  binding-protein-dependent transport systems inner membrane component  51.01 
 
 
286 aa  197  2.0000000000000003e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.720808  hitchhiker  0.00295081 
 
 
-
 
NC_008541  Arth_0029  binding-protein-dependent transport systems inner membrane component  45.74 
 
 
280 aa  187  1e-46  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1304  binding-protein-dependent transport systems inner membrane component  46.8 
 
 
279 aa  174  9.999999999999999e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.6164  normal  0.483465 
 
 
-
 
NC_009959  Dshi_4163  binding-protein-dependent transport systems inner membrane component  43.88 
 
 
525 aa  159  4e-38  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.4344  normal  0.880748 
 
 
-
 
NC_007802  Jann_0308  binding-protein-dependent transport systems inner membrane component  39.92 
 
 
511 aa  127  2.0000000000000002e-28  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
258 aa  126  3e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_009668  Oant_2977  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
523 aa  125  6e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.467356  n/a   
 
 
-
 
NC_008687  Pden_4361  binding-protein-dependent transport systems inner membrane component  45.28 
 
 
514 aa  120  1.9999999999999998e-26  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3665  binding-protein-dependent transport systems inner membrane component  44.67 
 
 
507 aa  119  6e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.701214  normal  0.0728471 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
268 aa  110  2.0000000000000002e-23  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  28.87 
 
 
282 aa  110  2.0000000000000002e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  30.12 
 
 
256 aa  108  8.000000000000001e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
322 aa  107  1e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
288 aa  106  4e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
306 aa  105  8e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
250 aa  104  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  35.71 
 
 
279 aa  104  1e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
283 aa  103  4e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
257 aa  102  6e-21  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
266 aa  102  6e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
274 aa  100  2e-20  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  37.87 
 
 
260 aa  100  2e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
256 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
362 aa  98.2  1e-19  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  30.09 
 
 
265 aa  97.8  2e-19  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_013739  Cwoe_2761  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
258 aa  96.7  3e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.165765  normal  0.0247635 
 
 
-
 
NC_009921  Franean1_5688  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
284 aa  96.3  4e-19  Frankia sp. EAN1pec  Bacteria  normal  0.748678  normal 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  28.1 
 
 
251 aa  96.3  4e-19  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.48 
 
 
249 aa  94  2e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1305  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
286 aa  94.4  2e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.527409  normal  0.263376 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
278 aa  93.2  3e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  28.45 
 
 
257 aa  93.6  3e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  29.11 
 
 
250 aa  93.2  4e-18  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  36.8 
 
 
322 aa  92.4  5e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
281 aa  92  7e-18  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  28.63 
 
 
258 aa  92  8e-18  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  28.63 
 
 
258 aa  92  8e-18  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  24.46 
 
 
249 aa  91.7  1e-17  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
255 aa  91.7  1e-17  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  28.84 
 
 
254 aa  91.3  1e-17  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  27.91 
 
 
257 aa  90.9  2e-17  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
255 aa  90.1  3e-17  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
281 aa  90.1  3e-17  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  29.51 
 
 
268 aa  89.7  4e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  28.69 
 
 
254 aa  89.7  4e-17  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  30.99 
 
 
281 aa  89.4  5e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  35.12 
 
 
261 aa  87.8  1e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  26.69 
 
 
260 aa  88.2  1e-16  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
303 aa  86.7  4e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
250 aa  85.5  7e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
282 aa  85.1  0.000000000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  35.51 
 
 
247 aa  85.1  0.000000000000001  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  32 
 
 
286 aa  84.7  0.000000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  28.64 
 
 
246 aa  84.7  0.000000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
307 aa  84.3  0.000000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  31.51 
 
 
288 aa  84  0.000000000000002  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  25.23 
 
 
265 aa  83.2  0.000000000000004  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  23.85 
 
 
256 aa  83.2  0.000000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
222 aa  83.2  0.000000000000004  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  32.82 
 
 
243 aa  82.4  0.000000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
289 aa  82.4  0.000000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  29.86 
 
 
284 aa  82  0.000000000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
286 aa  82  0.000000000000008  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
287 aa  82  0.000000000000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1082  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
305 aa  81.6  0.00000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.779888  normal  0.0329883 
 
 
-
 
NC_014151  Cfla_2798  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
288 aa  81.6  0.00000000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.706762  hitchhiker  0.0028911 
 
 
-
 
NC_008541  Arth_0030  binding-protein-dependent transport systems inner membrane component  31.61 
 
 
273 aa  80.9  0.00000000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
275 aa  80.9  0.00000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
272 aa  80.5  0.00000000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
258 aa  80.9  0.00000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  28.33 
 
 
266 aa  81.3  0.00000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  28.33 
 
 
266 aa  80.1  0.00000000000003  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.34 
 
 
308 aa  80.1  0.00000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  29.49 
 
 
271 aa  80.5  0.00000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  24.5 
 
 
257 aa  80.5  0.00000000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  24.31 
 
 
257 aa  79.7  0.00000000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  24.31 
 
 
265 aa  79.7  0.00000000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  24.31 
 
 
265 aa  79.7  0.00000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  24.31 
 
 
257 aa  79.7  0.00000000000004  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  24.31 
 
 
257 aa  79.7  0.00000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
253 aa  79.7  0.00000000000004  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_010338  Caul_1260  binding-protein-dependent transport systems inner membrane component  31.19 
 
 
252 aa  79.7  0.00000000000004  Caulobacter sp. K31  Bacteria  normal  0.21476  normal  0.0147088 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
258 aa  79.7  0.00000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_013739  Cwoe_1643  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
259 aa  79.7  0.00000000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.805205  normal  0.60128 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  24.31 
 
 
257 aa  79.7  0.00000000000005  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  24.31 
 
 
255 aa  79.3  0.00000000000005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
249 aa  78.6  0.00000000000009  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
272 aa  78.6  0.00000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  33.15 
 
 
375 aa  78.6  0.00000000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  30.6 
 
 
250 aa  78.2  0.0000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  30.6 
 
 
250 aa  78.2  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  30.6 
 
 
250 aa  78.6  0.0000000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  30.6 
 
 
250 aa  78.2  0.0000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  26.99 
 
 
259 aa  78.2  0.0000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  30.6 
 
 
250 aa  78.2  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
321 aa  78.2  0.0000000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  24.66 
 
 
255 aa  78.6  0.0000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1814  binding-protein-dependent transport systems inner membrane component  29.11 
 
 
287 aa  78.2  0.0000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0476587  normal  0.305557 
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
283 aa  78.2  0.0000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
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