| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4163 |
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| Symbol | |
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| ID | 5714733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | - |
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| Start bp | 10765 |
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| End bp | 12342 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641277058 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001542354 |
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| Protein GI | 159046686 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.4344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.880748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGG TGGCAACGGC CCCCCGGGCG CGGGCCGGGC GGGGGCAAAA CCGGGGGACG
TGGATCGGGC TGATCCTCAT CCTCGCGCTC TGGGAGCTGT CCGGGCGGCT TCTGGTCGAT
TCCTTCGTGC TCGCCAGCCC GAGCGAGACC CTGCGCTACC TGGTCGAGGA CTGGCGGCTG
ATGTCCCGCG CGCTCGGTGT GACCCTGTCG AACGCGGCGG CGGGCTTCGT GATCGGCAAC
CTGGCGGCGG TGCTGCTGGC CGGTATCGCG ATCCTCTGGC CGCGCAGCGA ACGGGTGGTG
ACGGGTCTGG CCCTGCTGGT CTTCTGCCTG CCGCTGGTGG CGACGGGGCC GATCCTGCGG
GTGTTCTTCG GCCCCGGCTC CGGTCCGCAG ATCGTTCTGG CGGCTCTTGC GGTCTATTAC
ACCACGCTGA TCCCCCTGCT GGTGGGGCTG CGCGCCGCAC CCGACAGCTG GTTCGACCTG
GTGCGCAGTT ACGGGCGCGG GCGGATGGCC GCCCTGGTGC ATGTGCGGCT GATGGCGGCC
CTGCCCTACC TTTTTGCCGG GTTGCAGATC GCCGCCCCCG CCGCGTTCCT CGGCGCCATG
GTCGGCGAGT TCACCGGAGC CGAGCGCGGC ATGGGCGTGC TGACCGTGCG CGCGATCCGG
GCGCTGGATG TGGAGATGAC CTGGGGGCTG GCCACGGTGG CCACGGCGGT GGCGATCCTC
GCCTATCTCG CGATCGGGGC CGTGGCACGC CGGGTGTTGC TGGAGGCGCC GCCGGTGATC
CTCGCCGCCC CCGCCGCAAG CGGGCGCAGC CGCCCGGCGC TGGATGCCGG GCTGGTCGTC
GCGCTCGCCC TGGCGGGCTG GGCCGGGGCG ATCTGGCTCT TCGGGCTGAA CCCGTTTTTC
GCCAAGGGGC CGCTGGACGT GGCCGAGGCC CTGATATGGG CCGCCGACGC GCCGCAGACG
CGCGCCACCA TCGGCGCCGC CCTGGCCGAG ACGGCGGTCT TCCTGCTGCC CGGCTACCTC
GCCGGGCTGG CCGCGGGGGC GGGGCTTGCC ATCCTGCTGG TGCTGGTCCC CGCGATCGCG
GGGACCGCGA TGCCCCTGGC CATTGCCCTG CGCTCGGTCC CGATCGTGAC CACCGCGCCG
CTCATCGTGC TGCTCCTGGG GCGCGGGGCA GTGGGGACCA TCACGCTGGT GGCGGTCATG
GTATTCTTTC CCAGCTTCGT CGCCTGCCTG CACGGGTTGC GGCAAGCCCC GGGCCAGGTG
ATGGACGTGT TCGACAGCTA TGCCGCCGGG CCGGTCGCGC GGCTGATGCG GGTGCGCATC
CCGGCGATGC TGCCAGCGTT CTTCGCCGCG GCGCGCATGG CGGTGCCGGC CTCGGTCCTC
GCCGTGACGG TGGTGGAATG GCTGGCCACC GGCGCGGGCA TCGGCAGCCT CATGGCGCTG
TCGGCCTCCC TGTCGGATTA CGACATGCTG TGGTCCTCGG TCGTGCTGGT CTCGGCCCTC
TCGGCGCTCG GCTACGCCGC CGTGGGCGTG GTGGAGCGGC GCGTCCTCGC CACCTACGCG
CCGGAGCAGC TGGCATGA
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| Protein sequence | MSAVATAPRA RAGRGQNRGT WIGLILILAL WELSGRLLVD SFVLASPSET LRYLVEDWRL
MSRALGVTLS NAAAGFVIGN LAAVLLAGIA ILWPRSERVV TGLALLVFCL PLVATGPILR
VFFGPGSGPQ IVLAALAVYY TTLIPLLVGL RAAPDSWFDL VRSYGRGRMA ALVHVRLMAA
LPYLFAGLQI AAPAAFLGAM VGEFTGAERG MGVLTVRAIR ALDVEMTWGL ATVATAVAIL
AYLAIGAVAR RVLLEAPPVI LAAPAASGRS RPALDAGLVV ALALAGWAGA IWLFGLNPFF
AKGPLDVAEA LIWAADAPQT RATIGAALAE TAVFLLPGYL AGLAAGAGLA ILLVLVPAIA
GTAMPLAIAL RSVPIVTTAP LIVLLLGRGA VGTITLVAVM VFFPSFVACL HGLRQAPGQV
MDVFDSYAAG PVARLMRVRI PAMLPAFFAA ARMAVPASVL AVTVVEWLAT GAGIGSLMAL
SASLSDYDML WSSVVLVSAL SALGYAAVGV VERRVLATYA PEQLA
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