More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_3665 on replicon NC_009050
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009050  Rsph17029_3665  binding-protein-dependent transport systems inner membrane component  100 
 
 
507 aa  929    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.701214  normal  0.0728471 
 
 
-
 
NC_009959  Dshi_4163  binding-protein-dependent transport systems inner membrane component  54.85 
 
 
525 aa  464  1e-129  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.4344  normal  0.880748 
 
 
-
 
NC_007802  Jann_0308  binding-protein-dependent transport systems inner membrane component  52.5 
 
 
511 aa  444  1e-123  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4361  binding-protein-dependent transport systems inner membrane component  57.23 
 
 
514 aa  430  1e-119  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_2977  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
523 aa  177  3e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.467356  n/a   
 
 
-
 
NC_009921  Franean1_5688  binding-protein-dependent transport systems inner membrane component  39.76 
 
 
284 aa  163  8.000000000000001e-39  Frankia sp. EAN1pec  Bacteria  normal  0.748678  normal 
 
 
-
 
NC_008541  Arth_0030  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
273 aa  146  9e-34  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2798  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
288 aa  132  1.0000000000000001e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.706762  hitchhiker  0.0028911 
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
256 aa  117  5e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1305  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
286 aa  112  1.0000000000000001e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.527409  normal  0.263376 
 
 
-
 
NC_012917  PC1_1432  binding-protein-dependent transport systems inner membrane component  30.41 
 
 
537 aa  103  8e-21  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.300396  n/a   
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
250 aa  101  2e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_013421  Pecwa_1832  binding-protein-dependent transport systems inner membrane component  28.64 
 
 
533 aa  102  2e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
258 aa  101  3e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_009921  Franean1_5689  binding-protein-dependent transport systems inner membrane component  43.86 
 
 
254 aa  100  6e-20  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
266 aa  100  7e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1304  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
279 aa  98.6  2e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.6164  normal  0.483465 
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
267 aa  98.6  3e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2797  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
286 aa  97.1  7e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.720808  hitchhiker  0.00295081 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  29.55 
 
 
249 aa  94.7  3e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
255 aa  95.1  3e-18  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
243 aa  94.4  4e-18  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
288 aa  93.6  7e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
268 aa  93.2  9e-18  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_013743  Htur_0669  binding-protein-dependent transport systems inner membrane component  34.83 
 
 
258 aa  92  2e-17  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  35.71 
 
 
266 aa  92  2e-17  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0029  binding-protein-dependent transport systems inner membrane component  37.76 
 
 
280 aa  92.4  2e-17  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  33.95 
 
 
265 aa  92  2e-17  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  42.24 
 
 
266 aa  91.3  4e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  27.84 
 
 
277 aa  91.3  4e-17  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  28.27 
 
 
274 aa  90.9  5e-17  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  32.99 
 
 
258 aa  90.9  5e-17  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
253 aa  90.9  5e-17  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  31.11 
 
 
282 aa  90.9  5e-17  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  25.45 
 
 
265 aa  90.1  7e-17  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
246 aa  90.5  7e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  34.95 
 
 
321 aa  90.1  7e-17  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  28.81 
 
 
283 aa  90.5  7e-17  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
306 aa  90.1  8e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  32.02 
 
 
258 aa  89.7  1e-16  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  25 
 
 
257 aa  88.6  2e-16  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
249 aa  89  2e-16  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  25 
 
 
257 aa  88.6  2e-16  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  34.95 
 
 
321 aa  89  2e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  25 
 
 
265 aa  88.2  3e-16  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  25 
 
 
265 aa  88.2  3e-16  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
245 aa  88.2  3e-16  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  25 
 
 
255 aa  88.2  3e-16  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  25 
 
 
257 aa  88.2  3e-16  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  29.36 
 
 
258 aa  88.2  4e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  25 
 
 
257 aa  87.8  4e-16  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
281 aa  87.8  4e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  41.74 
 
 
272 aa  88.2  4e-16  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  30.48 
 
 
250 aa  87.4  5e-16  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  25.25 
 
 
256 aa  87.4  5e-16  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  35.17 
 
 
250 aa  87  6e-16  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  35.17 
 
 
250 aa  87  6e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  35.17 
 
 
250 aa  87  7e-16  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  35.17 
 
 
250 aa  87  7e-16  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
273 aa  87  7e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  35.17 
 
 
250 aa  87  7e-16  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
303 aa  87  7e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  29.95 
 
 
251 aa  87  7e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1083  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
321 aa  86.7  9e-16  Methylobacterium populi BJ001  Bacteria  normal  0.148611  normal  0.032179 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  30.48 
 
 
251 aa  86.7  9e-16  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  29.72 
 
 
260 aa  86.7  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_013093  Amir_4889  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
258 aa  86.3  0.000000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.90454  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  30.48 
 
 
251 aa  86.3  0.000000000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  25.74 
 
 
255 aa  86.3  0.000000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  35.17 
 
 
250 aa  85.9  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
255 aa  85.9  0.000000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  33.17 
 
 
281 aa  85.9  0.000000000000002  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
259 aa  85.1  0.000000000000002  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  30.53 
 
 
288 aa  84.7  0.000000000000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  24.55 
 
 
257 aa  85.1  0.000000000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2701  binding-protein-dependent transport systems inner membrane component  34 
 
 
315 aa  84.7  0.000000000000004  Jannaschia sp. CCS1  Bacteria  normal  0.725502  normal  0.78823 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
322 aa  84.3  0.000000000000004  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
250 aa  84  0.000000000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
265 aa  84  0.000000000000007  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.94 
 
 
308 aa  83.6  0.000000000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  27.99 
 
 
271 aa  83.2  0.00000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
256 aa  83.2  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
278 aa  82.8  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
253 aa  82.8  0.00000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
375 aa  82.8  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
283 aa  82  0.00000000000002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
288 aa  82.4  0.00000000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  28.28 
 
 
252 aa  82  0.00000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  29.91 
 
 
375 aa  81.6  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
273 aa  81.6  0.00000000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  34.55 
 
 
322 aa  81.3  0.00000000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
316 aa  81.6  0.00000000000003  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  33.16 
 
 
325 aa  82  0.00000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  33.11 
 
 
261 aa  81.3  0.00000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  29.38 
 
 
257 aa  80.9  0.00000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  28.66 
 
 
254 aa  80.9  0.00000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
260 aa  80.9  0.00000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
268 aa  80.5  0.00000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  31.47 
 
 
247 aa  79.7  0.0000000000001  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
250 aa  79.7  0.0000000000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
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