More than 300 homologs were found in PanDaTox collection
for query gene Franean1_5688 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_5688  binding-protein-dependent transport systems inner membrane component  100 
 
 
284 aa  545  1e-154  Frankia sp. EAN1pec  Bacteria  normal  0.748678  normal 
 
 
-
 
NC_014151  Cfla_2798  binding-protein-dependent transport systems inner membrane component  48.41 
 
 
288 aa  228  9e-59  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.706762  hitchhiker  0.0028911 
 
 
-
 
NC_008541  Arth_0030  binding-protein-dependent transport systems inner membrane component  50.85 
 
 
273 aa  217  2e-55  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1305  binding-protein-dependent transport systems inner membrane component  44.41 
 
 
286 aa  216  4e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.527409  normal  0.263376 
 
 
-
 
NC_007802  Jann_0308  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
511 aa  156  3e-37  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
258 aa  152  7e-36  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_009668  Oant_2977  binding-protein-dependent transport systems inner membrane component  37.99 
 
 
523 aa  152  8e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.467356  n/a   
 
 
-
 
NC_009050  Rsph17029_3665  binding-protein-dependent transport systems inner membrane component  40.79 
 
 
507 aa  146  3e-34  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.701214  normal  0.0728471 
 
 
-
 
NC_009959  Dshi_4163  binding-protein-dependent transport systems inner membrane component  39.22 
 
 
525 aa  142  7e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.4344  normal  0.880748 
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
266 aa  137  2e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4361  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
514 aa  133  3.9999999999999996e-30  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
268 aa  130  2.0000000000000002e-29  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
282 aa  120  1.9999999999999998e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
250 aa  119  3.9999999999999996e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  29.3 
 
 
266 aa  115  6.9999999999999995e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  28.91 
 
 
266 aa  114  2.0000000000000002e-24  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  28.09 
 
 
265 aa  107  2e-22  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
256 aa  105  6e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
250 aa  105  1e-21  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  28.17 
 
 
281 aa  105  1e-21  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  34.52 
 
 
250 aa  103  3e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  28.24 
 
 
272 aa  103  3e-21  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  26.92 
 
 
265 aa  103  3e-21  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
256 aa  102  6e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  33.93 
 
 
251 aa  102  9e-21  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  33.93 
 
 
250 aa  101  1e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  33.93 
 
 
250 aa  101  1e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  33.93 
 
 
250 aa  101  1e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  33.93 
 
 
250 aa  101  1e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  33.93 
 
 
250 aa  101  1e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
251 aa  101  1e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  33.93 
 
 
251 aa  102  1e-20  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  32.74 
 
 
250 aa  100  2e-20  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  25.62 
 
 
253 aa  100  2e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
287 aa  100  4e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
274 aa  99.4  6e-20  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.87 
 
 
249 aa  98.6  1e-19  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
246 aa  98.2  1e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_4889  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
258 aa  98.6  1e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.90454  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  29.13 
 
 
273 aa  98.2  1e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
268 aa  97.8  2e-19  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  30.13 
 
 
261 aa  97.4  2e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  29.58 
 
 
279 aa  97.8  2e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
277 aa  97.4  2e-19  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_013440  Hoch_2033  binding-protein-dependent transport systems inner membrane component  35.8 
 
 
275 aa  97.1  3e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0253714  normal  0.258175 
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
267 aa  97.1  3e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
254 aa  97.1  3e-19  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
260 aa  97.1  3e-19  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  28.74 
 
 
253 aa  97.4  3e-19  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
273 aa  96.7  4e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  29.35 
 
 
283 aa  96.3  6e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
250 aa  96.3  6e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  32.83 
 
 
322 aa  95.5  8e-19  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
249 aa  95.5  8e-19  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_2701  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
315 aa  94.4  2e-18  Jannaschia sp. CCS1  Bacteria  normal  0.725502  normal  0.78823 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  29.49 
 
 
251 aa  94  2e-18  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
255 aa  93.6  3e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  28.84 
 
 
282 aa  93.6  3e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
278 aa  93.2  4e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
271 aa  93.2  4e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  28.26 
 
 
257 aa  93.2  5e-18  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_007493  RSP_0181  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  30.2 
 
 
311 aa  92.8  5e-18  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.121482  n/a   
 
 
-
 
NC_011989  Avi_3459  ABC transporter  29.41 
 
 
288 aa  92.4  8e-18  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  28.23 
 
 
254 aa  92  9e-18  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  29.46 
 
 
254 aa  92  9e-18  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_009049  Rsph17029_1814  binding-protein-dependent transport systems inner membrane component  30.03 
 
 
287 aa  91.3  1e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0476587  normal  0.305557 
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  29.7 
 
 
282 aa  91.3  2e-17  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
257 aa  90.9  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
257 aa  90.9  2e-17  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2371  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
294 aa  91.3  2e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.91742  normal  0.325627 
 
 
-
 
NC_007643  Rru_A3454  binding-protein dependent transport system inner membrane protein  33.85 
 
 
298 aa  90.1  3e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  32.18 
 
 
488 aa  90.1  4e-17  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
254 aa  90.1  4e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  26.2 
 
 
259 aa  89.7  5e-17  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_011004  Rpal_2777  binding-protein-dependent transport systems inner membrane component  26.83 
 
 
292 aa  89.4  6e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  29.67 
 
 
222 aa  89.4  7e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
268 aa  89  7e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  29.67 
 
 
250 aa  89  8e-17  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2761  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
258 aa  88.6  1e-16  Conexibacter woesei DSM 14684  Bacteria  normal  0.165765  normal  0.0247635 
 
 
-
 
NC_014212  Mesil_0817  ABC transporter related protein  31.48 
 
 
492 aa  88.2  1e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  0.309085  normal  0.730271 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
306 aa  88.2  1e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  31.55 
 
 
254 aa  88.6  1e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  32.91 
 
 
262 aa  88.2  1e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
264 aa  87.8  2e-16  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
264 aa  87.8  2e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_009921  Franean1_3891  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
300 aa  87.4  2e-16  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.000896674  normal  0.103005 
 
 
-
 
NC_009667  Oant_0345  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
297 aa  88.2  2e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
264 aa  87.4  3e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  28.46 
 
 
288 aa  86.7  4e-16  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1372  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
305 aa  86.7  4e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.856164  normal  0.860518 
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
282 aa  86.7  4e-16  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  28.49 
 
 
249 aa  86.3  5e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_009921  Franean1_5689  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
254 aa  85.5  9e-16  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1136  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
263 aa  85.1  0.000000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.629035  normal  0.968824 
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
263 aa  84.7  0.000000000000001  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1181  binding-protein-dependent transport systems inner membrane component  24.69 
 
 
271 aa  84.7  0.000000000000001  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  30.88 
 
 
263 aa  84.3  0.000000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_008254  Meso_2045  binding-protein-dependent transport systems inner membrane component  28.75 
 
 
312 aa  84.3  0.000000000000002  Chelativorans sp. BNC1  Bacteria  normal  0.613322  n/a   
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  30 
 
 
272 aa  84.3  0.000000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  28.4 
 
 
256 aa  84  0.000000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
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