More than 300 homologs were found in PanDaTox collection
for query gene Fnod_1426 on replicon NC_009718
Organism: Fervidobacterium nodosum Rt17-B1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009718  Fnod_1426  response regulator receiver protein  100 
 
 
118 aa  236  5.999999999999999e-62  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0460  response regulator receiver protein  76.72 
 
 
119 aa  191  3e-48  Thermosipho melanesiensis BI429  Bacteria  normal  0.903697  n/a   
 
 
-
 
NC_010483  TRQ2_1469  response regulator receiver protein  60.87 
 
 
116 aa  144  4.0000000000000006e-34  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1423  response regulator receiver protein  60.87 
 
 
116 aa  144  4.0000000000000006e-34  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1627  response regulator receiver protein  53.45 
 
 
119 aa  127  5.0000000000000004e-29  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0029  response regulator receiver protein  47.79 
 
 
126 aa  114  6e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0406  response regulator receiver protein  46.9 
 
 
126 aa  111  3e-24  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0458  response regulator receiver protein  45.83 
 
 
120 aa  109  1.0000000000000001e-23  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000275929  n/a   
 
 
-
 
NC_012918  GM21_3466  response regulator receiver protein  46.9 
 
 
125 aa  106  1e-22  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007498  Pcar_2959  two component signal transduction response regulator  47.79 
 
 
128 aa  105  2e-22  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.888929  n/a   
 
 
-
 
NC_011146  Gbem_3403  response regulator receiver protein  46.02 
 
 
124 aa  105  3e-22  Geobacter bemidjiensis Bem  Bacteria  normal  0.809384  n/a   
 
 
-
 
NC_009483  Gura_0854  response regulator receiver protein  43.86 
 
 
124 aa  102  1e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0187  response regulator receiver protein  49.56 
 
 
122 aa  95.1  3e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.283319  normal 
 
 
-
 
NC_007517  Gmet_3179  response regulator receiver domain-containing protein  45.13 
 
 
120 aa  94.4  4e-19  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.164981 
 
 
-
 
NC_002939  GSU3253  response regulator  44.25 
 
 
123 aa  91.3  4e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  42.11 
 
 
480 aa  90.1  1e-17  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_002939  GSU1003  nitrogen regulation protein NR(I)  41.23 
 
 
481 aa  84.3  5e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.158383  n/a   
 
 
-
 
NC_011831  Cagg_2217  two component transcriptional regulator, winged helix family  38.32 
 
 
276 aa  83.2  0.000000000000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00294817  normal 
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  45.24 
 
 
239 aa  82.8  0.000000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  39.82 
 
 
480 aa  81.6  0.000000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  38.6 
 
 
480 aa  80.5  0.000000000000008  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_011831  Cagg_2019  GAF sensor hybrid histidine kinase  35.29 
 
 
1016 aa  79.7  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.25506  normal 
 
 
-
 
NC_013037  Dfer_3651  two component transcriptional regulator, winged helix family  40 
 
 
228 aa  79.7  0.00000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0435949 
 
 
-
 
NC_007519  Dde_3609  response regulator receiver domain-containing protein  40.52 
 
 
122 aa  79.7  0.00000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  35.65 
 
 
458 aa  79  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_008609  Ppro_3079  two component, sigma54 specific, Fis family transcriptional regulator  37.72 
 
 
480 aa  79.3  0.00000000000002  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00177638  n/a   
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  37.93 
 
 
124 aa  78.2  0.00000000000004  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_011769  DvMF_0215  two component, sigma54 specific, transcriptional regulator, Fis family  34.21 
 
 
528 aa  77.4  0.00000000000007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0571306 
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  37.74 
 
 
394 aa  76.6  0.00000000000009  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  39.29 
 
 
458 aa  76.6  0.0000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  39.18 
 
 
653 aa  76.3  0.0000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  41.46 
 
 
266 aa  76.6  0.0000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  33.62 
 
 
391 aa  75.5  0.0000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0114  Signal transduction histidine kinase  46.91 
 
 
939 aa  75.5  0.0000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.153209 
 
 
-
 
NC_007650  BTH_II1189  response regulator  39.13 
 
 
229 aa  76.3  0.0000000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2720  multi-sensor signal transduction histidine kinase  41.24 
 
 
657 aa  75.9  0.0000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.312815 
 
 
-
 
NC_008340  Mlg_2505  two component transcriptional regulator  37.93 
 
 
226 aa  75.9  0.0000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.457878  normal 
 
 
-
 
NC_008463  PA14_02260  putative two-component response regulator  38.33 
 
 
121 aa  75.5  0.0000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.797803  normal 
 
 
-
 
NC_013173  Dbac_1110  response regulator receiver protein  38.6 
 
 
117 aa  75.5  0.0000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2805  two component, sigma54 specific, transcriptional regulator, Fis family  36.28 
 
 
478 aa  75.1  0.0000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.228775  n/a   
 
 
-
 
NC_012918  GM21_1405  two component, sigma54 specific, transcriptional regulator, Fis family  36.28 
 
 
478 aa  75.1  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000117702 
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  40.54 
 
 
385 aa  75.1  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_013730  Slin_5387  two component transcriptional regulator, winged helix family  39.62 
 
 
236 aa  75.1  0.0000000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1294  DNA-binding response regulator  44.3 
 
 
180 aa  74.7  0.0000000000004  Dehalococcoides ethenogenes 195  Bacteria  unclonable  0.00000125664  n/a   
 
 
-
 
NC_013173  Dbac_0387  response regulator receiver modulated metal dependent phosphohydrolase  37.74 
 
 
487 aa  74.7  0.0000000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0207452  n/a   
 
 
-
 
NC_004578  PSPTO_1679  transcriptional regulatory protein PhoP, putative  36.52 
 
 
225 aa  74.7  0.0000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3709  response regulator receiver:transcriptional regulatory protein, C-terminal  36.52 
 
 
225 aa  74.7  0.0000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00140607 
 
 
-
 
NC_011365  Gdia_2320  response regulator receiver protein  42.02 
 
 
127 aa  74.7  0.0000000000004  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.632565 
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  35.83 
 
 
452 aa  74.7  0.0000000000004  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal 
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  32.76 
 
 
120 aa  74.3  0.0000000000005  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  37.17 
 
 
456 aa  74.3  0.0000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  40.91 
 
 
233 aa  74.3  0.0000000000006  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_007498  Pcar_1994  two component signal transduction response regulator  38.39 
 
 
477 aa  73.9  0.0000000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2107  response regulator receiver protein  35.4 
 
 
768 aa  73.9  0.0000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009656  PSPA7_0259  putative two-component response regulator  37.5 
 
 
121 aa  73.9  0.0000000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  0.40567  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  33.93 
 
 
485 aa  73.9  0.0000000000007  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1891  DNA-binding response regulator  39.81 
 
 
223 aa  73.9  0.0000000000007  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  35.45 
 
 
1139 aa  73.9  0.0000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_009674  Bcer98_3857  response regulator receiver protein  34.48 
 
 
122 aa  73.6  0.0000000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.161717  n/a   
 
 
-
 
NC_007517  Gmet_2710  CheA signal transduction histidine kinase  40 
 
 
777 aa  73.6  0.0000000000008  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2180  DNA-binding response regulator  39.81 
 
 
223 aa  73.9  0.0000000000008  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0299585  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  41.46 
 
 
264 aa  73.6  0.0000000000009  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_011146  Gbem_1660  response regulator receiver protein  35.9 
 
 
126 aa  73.6  0.0000000000009  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2553  response regulator receiver protein  35.9 
 
 
126 aa  73.6  0.0000000000009  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.1194499999999997e-20 
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  35.09 
 
 
459 aa  73.6  0.0000000000009  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_012918  GM21_1525  response regulator receiver modulated diguanylate cyclase  39.36 
 
 
316 aa  73.2  0.000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.15223e-23 
 
 
-
 
NC_013165  Shel_05730  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40 
 
 
242 aa  73.2  0.000000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.587783  normal 
 
 
-
 
NC_011769  DvMF_2332  response regulator receiver protein  41.28 
 
 
122 aa  73.2  0.000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_8872  response regulator receiver protein  39.47 
 
 
234 aa  72.8  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal 
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  35.09 
 
 
125 aa  73.2  0.000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  39.39 
 
 
455 aa  73.6  0.000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0165  two component transcriptional regulator  35.45 
 
 
243 aa  73.2  0.000000000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2550  multi-sensor signal transduction histidine kinase  40.21 
 
 
685 aa  72.8  0.000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009077  Mjls_0155  two component transcriptional regulator  35.45 
 
 
243 aa  73.2  0.000000000001  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0636837 
 
 
-
 
NC_009455  DehaBAV1_1106  response regulator receiver protein  44.3 
 
 
180 aa  72.8  0.000000000001  Dehalococcoides sp. BAV1  Bacteria  normal  0.0674112  n/a   
 
 
-
 
NC_008705  Mkms_0174  two component transcriptional regulator  35.45 
 
 
243 aa  73.2  0.000000000001  Mycobacterium sp. KMS  Bacteria  normal  0.947413  normal 
 
 
-
 
NC_009972  Haur_0852  GAF sensor hybrid histidine kinase  34.48 
 
 
1055 aa  72.8  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  41.12 
 
 
223 aa  72  0.000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  41.12 
 
 
223 aa  72.4  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1664  DNA-binding response regulator  40 
 
 
226 aa  72  0.000000000002  Campylobacter jejuni RM1221  Bacteria  normal  0.690265  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  41.12 
 
 
223 aa  72  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  39.39 
 
 
458 aa  72  0.000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  41.12 
 
 
223 aa  72  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  41.12 
 
 
223 aa  72  0.000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2159  two component transcriptional regulator, winged helix family  36.97 
 
 
227 aa  72.8  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00177162  n/a   
 
 
-
 
NC_007492  Pfl01_4240  two component transcriptional regulator  35.65 
 
 
225 aa  72.8  0.000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.735778  normal 
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  41.12 
 
 
223 aa  72  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0931  response regulator receiver protein  34.75 
 
 
120 aa  72.4  0.000000000002  Thermosipho melanesiensis BI429  Bacteria  normal  0.252152  n/a   
 
 
-
 
NC_012850  Rleg_3862  response regulator receiver protein  36.84 
 
 
119 aa  72.4  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.762525  normal  0.105944 
 
 
-
 
NC_013061  Phep_0203  response regulator receiver  34.86 
 
 
231 aa  72  0.000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.359659 
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  39.39 
 
 
457 aa  72  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  41.12 
 
 
223 aa  72.4  0.000000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0235  PAS/PAC sensor hybrid histidine kinase  36.21 
 
 
941 aa  72.4  0.000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1483  DNA-binding response regulator  39.47 
 
 
226 aa  72  0.000000000002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1476  two component transcriptional regulator  36.45 
 
 
219 aa  72.4  0.000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2715  response regulator receiver modulated diguanylate cyclase  39.36 
 
 
314 aa  72.4  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2713  two component, sigma54 specific, transcriptional regulator, Fis family  36.61 
 
 
454 aa  72.4  0.000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3098  two component, sigma54 specific, transcriptional regulator, Fis family  34.51 
 
 
491 aa  72.8  0.000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009632  SaurJH1_1505  response regulator receiver  36.45 
 
 
219 aa  72.4  0.000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.404603  n/a   
 
 
-
 
NC_011769  DvMF_1251  multi-sensor hybrid histidine kinase  33.61 
 
 
1101 aa  72.4  0.000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000252838 
 
 
-
 
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