| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1679 |
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| Symbol | |
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| ID | 1183316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1849724 |
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| End bp | 1850401 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393051 |
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| Product | transcriptional regulatory protein PhoP, putative |
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| Protein accession | NP_791504 |
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| Protein GI | 28868885 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGT TGGTAGTCGA GGATGAAGCG CTGCTGCGCC ATCACCTGCG TACCCGTCTG
ACCGAAGCGG GGCACGTGGT GGAAGCGGTG GCCAACGCCG AAGAAGCGCT GTATCAGGTT
GCCCAATTCA ATCACGATCT GGCCGTGATC GACCTCGGCT TGCCGGGCAT CGGCGGGCTG
GACCTGATTC GTCAGTTGCG CGCGCTGGGC AAGGCTTTTC CGATCCTGAT CCTGACCGCG
CGCGGTAACT GGCAGGACAA GGTCGAGGGG CTGGCCGCCG GGGCTGACGA TTACGTGGTC
AAACCGTTCC AGTTCGAAGA GCTGGAAGCG CGGCTCAACG CCTTGTTACG CCGCTCCAGC
GGCTTTATTC AGTCAACCAT CACCGCTGGC CCGCTGTTGC TGGACCTCAA CCGCAAGCAC
GCCGCGCTGG GCGAGCAGCC GCTGGCGCTG ACGGCCTACG AATACCGCAT TCTCGAATAC
CTGATGCTTC ATCATCAGCA AGTGGTGCCC AAAGAGCGCT TGATGGAGCA GTTGTACCCC
GATGACGACG AGCGCGATCC GAACGTGATC GAAGTGCTGG TTGGCCGGCT GCGTCGTAAA
CTGGACAGCA GCGTGGCGTT CAAACCCATC GAAACCGTGC GCGGCATGGG CTATCTGTTC
AATGAGCGCT GTACGTGA
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| Protein sequence | MKLLVVEDEA LLRHHLRTRL TEAGHVVEAV ANAEEALYQV AQFNHDLAVI DLGLPGIGGL
DLIRQLRALG KAFPILILTA RGNWQDKVEG LAAGADDYVV KPFQFEELEA RLNALLRRSS
GFIQSTITAG PLLLDLNRKH AALGEQPLAL TAYEYRILEY LMLHHQQVVP KERLMEQLYP
DDDERDPNVI EVLVGRLRRK LDSSVAFKPI ETVRGMGYLF NERCT
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