Gene CPR_1891 details

Gene Information

• Locus tag: CPR_1891
• ID: 4206214
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2088309
• End bp: 2088980
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642566441
• Product: DNA-binding response regulator
• Protein accession: YP_699201
• Protein GI: 110803691
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA CGGTACTTAT TGTAGAAGAT GAAATACGTA TAAGATTTCT TGTAAGAGAT 
TACTTCAAAA AAGAGGGATT TAATGTGTTA GAAGCTTCTG ATGGTGAGGA AGCTCTTAGG 
ATATTTTCTG AAAATATAGT TGATTTAGCA ATATTAGATA TAATGATGCC AAAATTAGAT 
GGACTTGCTG TTTGTAGAAA TATAAGGGAA GTTTCCAATA CTCCTATAAT ATTATTAACA 
GCTAAAAGCC AAGAAGAAGA TAAACTTTTA GGTTATGAGC TTGGAGCTGA TGACTATATG 
ACTAAACCTT TTAGTCCTAA GGTTTTATTA GCAAAGTCTA AAGCATTATT AAGAAGAACA 
GGTACATTAA ATGATAAAAA CATTTTAGAT TTTAATGGAT TAACAATAAA TAAACTATCT 
CATGAAGTAA AACTAAATGG AGAAGAACTA TTACTATCTC CTAAGGAATA TGATTTACTT 
ATTTATCTTT CTTCAAATGA AGGAATAGCT TTATCAAGGG ATAGAATTCT AGATAATGTT 
TGGGGCTATG ATTATTTTGG AGATATAAGA ACAGTTGATA CGAACATAAA AAGACTTAGA 
GAGAAATTAC TAGATAAAGC TAATTATATA GCTACTGTTA GGGGAAGTGG CTATAAGTTT 
GAGGTGAAAT AG 

 

Protein sequence

MNKTVLIVED EIRIRFLVRD YFKKEGFNVL EASDGEEALR IFSENIVDLA ILDIMMPKLD 
GLAVCRNIRE VSNTPIILLT AKSQEEDKLL GYELGADDYM TKPFSPKVLL AKSKALLRRT 
GTLNDKNILD FNGLTINKLS HEVKLNGEEL LLSPKEYDLL IYLSSNEGIA LSRDRILDNV 
WGYDYFGDIR TVDTNIKRLR EKLLDKANYI ATVRGSGYKF EVK