| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0235 |
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| Symbol | |
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| ID | 4030006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 258873 |
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| End bp | 261698 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637968771 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_575595 |
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| Protein GI | 92115866 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAGA AGGAAAGTGT AGGTCTGGAG GCTTTCCTCG CCGGCGGCGG GGAAATGGCC
GATTTGACGC GCCGGTTCGA CTGGGCCGGC ACATCGGTCG GTGCTCCCGA GATCTGGCCC
CAGAGTCTGC GCACGGCGGT CCGCATCATC CTCAATACCA ACCACCCGAT GTTGATCTGG
TGGGGGCCGG ACCTGATCCA GTTCTATAAT GATGGCTTCC GCCAGACCCT GGGGCCGGAA
CGGCATCCCG GCGCGCTCGG CGAGAGGGGC CGGGACTGCT GGGGCGAGGT CTGGGACATC
GTCGGTCCCC AGATTGAACA CGTCATGGCC GGGCGCGGTG CGACCTGGCA TGAGGACCAG
CTCGTTCCGG TCACGCGCCA CGGCCGGCTG GAGCAGGTCT ATTGGACCTA CGGCTTCAGC
CCGATCGATG AAGATCACGG TGTCGGCGGG GTGCTCGTGG TGTGCCGCGA CGTCACCCGC
GAACATCTTG CCAAAGTCGC CTTGCAGGAA CGGGAGACCG AGCTTGCTCG CGTGCAGGCG
ATCGGCCGGA TCGGCGGCCT CGAGGTCGAT CTGCACACCG GTCATCGCAG TCGCAAGTCG
CCGGAGTATC TGAAGATACA CGGCCTTCCG CCGGAAGCCG TCAACGAAAG TCATGAGGAC
TGGCTGCGTC GCGTGCATCC CGATGACCGC GCGGTCGCCG AAGGGCAGTT CATCGATGCG
GTGCGGGGCG GTGATCGCGA GTATGCGGTG CGCTACCGCA TCATCCGGCC GAGCGACGGC
GAGACACGCT GGATTTCCGC GCGATCGGTG ATCGAGCGGG ATGCCGACGG CAAGGCCATC
CGGCTGTTCG GCGCGCACAC CGACATCACC GATCAGGTCG AGGCGGTGCG CGCCATCCGC
CAGCGCGAGG AGGAATTCCG CGCGCTTGCG GAGGCGCTGC CGCATCACGT CTGGACGGCA
AAGCCCGACG GCGAGCTGAA CTGGTGCAAT ACGCGCGTCT ACGACTATGT CGGCGCGAAG
CCGGACGAAC TCGTCGGCAA CGACTGGAAC AAGGTGGTCC ATCCGGACGA CGCATCCGCC
GCGGCCGCGG CGTGGACCCA TGCGGTGGCC ACGGGCGACC CTTATGAGAT CGAATTCCGG
CTGCGCGGCG CCGACGGCAG CTATCACTGG TTTCTGGCGC GCGCGGTGCC GGCGCGCGAC
GAAGACGGTC GTATCACCCG CTGGATCGGC ACCAACACCG ACGTCCACGA TCAGAAACTG
TTCGCAGGCA AGCTCGCAGA ACTGAACGCG ACACTCGCCG AGCGCGTCGA GGAGAAAACC
CGCGAGCGCG ACCGGATCTG GAACGTGTCG CAGGACCTGC TGCTGGTCAC GGACCACGAC
GGCATCTGCC GCTCCGTCAA TCCCGCCTGG ACGAGGACGC TCGGCTGGAG TGAGGCCGTG
CTGCTGGGGC GCACAGCCGA ATGGATCGAG CATCCCGACG ACATCATAAA GACCCGGGTG
GAGGTCCGCC GCCTCGCGCG TGGCAAGGCC ACGGTACGAT TCGAAAACCG GCTCCGTCAC
AAGGACGGTT CATACCGGTG GCTGTCCTGG ACCGCGGTCC CGGATCAGAA CCTGATCTAC
GCCGTCGCGC GCGACATCAC CGCGGAGAAG GCCGCGACCG AACGGTTGAG GGCCGCCGAG
GAGGCGCTGC GTCAATCGCA GAAAATGGAG GCGGTCGGCC AGTTGACCGG CGGCATCGCC
CACGATTTCA ACAACCTGCT TACCGGCATC GTGGGCTCGC TGGATCTGAT GCAGACGCGG
CTCAATCAGG GGCGGACCGA TCGCGCCGGA CGCTACATCG AGGCCGCGAT GGCCTCGGCC
AATCGGGCCG CGGCGCTGAC GCACCGGCTG CTGGCGTTCG CCCGCAGACA GCCTCTGGTG
CCGAAGCCGG TCGATGCCAA TCATCTCGTC CTCTCGCTGG AAGACCTGCT GCGCAGGACC
ATCGGCGAGG CTATCGATCT GGAGATCGCG CCGTCCGGAC GGCTGTGGCA AACGCTGTGC
GATCCGAATC AGCTCGAAAG CGCACTGCTC AATCTCGCCA TCAATGCGCG GGACGCCATG
CCCGGTGGCG GCAAGCTCGC GATCGCGACG GCGAACATGA CCGTCGGCGC CGCCGATGCC
GGCTCCTCCG CCGTGCGGCC GGGCGACTAT GTCTGCATCA CCGTCACCGA CACCGGAACG
GGCATGACCG CCGAGGTCGC GGCGCGCGCC TTCGATCCTT TCTTCACCAC CAAGCCGATC
GGCCAAGGGA CCGGACTCGG ACTGTCGATG ATCTACGGAT TCGCGCGGCA ATCGAACGGC
CACATCGCCT TCGATACTGC GCCAGGACGG GGCACGTCGA TCAGGCTTTG TCTGCCGCGC
CATGATGACG TCGCCGAGGC CGATCAGGCT TCGCCCGCCA ACAAGGACAG GACCGCGGCC
ACCGGTGAAA CCGTGCTGGT CGTCGAGGAT GAACCGGTCG TGCGCGGCGT CATCATCGAA
ATGCTGCACG ATCAAGGCTA TCTGACGCGC GAAGCCGCAG ACGGGGTTGC GGGCTTGCGG
ATTCTGCAAC TGGACAAGCC CGTCGATCTC CTGCTGACCG ACATAGGGCT GCCCGGCATG
AACGGCCGCC AGCTCGCGGA TCAGGCGCGG GAGCTGCGAC CGGATCTGAA AATCCTCTTC
ATGACCGGCT ATGCCGAAAA CGCCGCGAAC GCCGAAGGTT TCCTCCTGCC CGGCATGGAC
ATGATCACCA AGCCGTTCGA TCTCGGCCAT TTGTCGCAGC GCGTGCGGGA CATCATTTCC
GGCTGA
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| Protein sequence | MLEKESVGLE AFLAGGGEMA DLTRRFDWAG TSVGAPEIWP QSLRTAVRII LNTNHPMLIW
WGPDLIQFYN DGFRQTLGPE RHPGALGERG RDCWGEVWDI VGPQIEHVMA GRGATWHEDQ
LVPVTRHGRL EQVYWTYGFS PIDEDHGVGG VLVVCRDVTR EHLAKVALQE RETELARVQA
IGRIGGLEVD LHTGHRSRKS PEYLKIHGLP PEAVNESHED WLRRVHPDDR AVAEGQFIDA
VRGGDREYAV RYRIIRPSDG ETRWISARSV IERDADGKAI RLFGAHTDIT DQVEAVRAIR
QREEEFRALA EALPHHVWTA KPDGELNWCN TRVYDYVGAK PDELVGNDWN KVVHPDDASA
AAAAWTHAVA TGDPYEIEFR LRGADGSYHW FLARAVPARD EDGRITRWIG TNTDVHDQKL
FAGKLAELNA TLAERVEEKT RERDRIWNVS QDLLLVTDHD GICRSVNPAW TRTLGWSEAV
LLGRTAEWIE HPDDIIKTRV EVRRLARGKA TVRFENRLRH KDGSYRWLSW TAVPDQNLIY
AVARDITAEK AATERLRAAE EALRQSQKME AVGQLTGGIA HDFNNLLTGI VGSLDLMQTR
LNQGRTDRAG RYIEAAMASA NRAAALTHRL LAFARRQPLV PKPVDANHLV LSLEDLLRRT
IGEAIDLEIA PSGRLWQTLC DPNQLESALL NLAINARDAM PGGGKLAIAT ANMTVGAADA
GSSAVRPGDY VCITVTDTGT GMTAEVAARA FDPFFTTKPI GQGTGLGLSM IYGFARQSNG
HIAFDTAPGR GTSIRLCLPR HDDVAEADQA SPANKDRTAA TGETVLVVED EPVVRGVIIE
MLHDQGYLTR EAADGVAGLR ILQLDKPVDL LLTDIGLPGM NGRQLADQAR ELRPDLKILF
MTGYAENAAN AEGFLLPGMD MITKPFDLGH LSQRVRDIIS G
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