Gene Pfl01_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4240 
Symbol 
ID3717818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4782576 
End bp4783253 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content62% 
IMG OID 
Producttwo component transcriptional regulator 
Protein accessionYP_349968 
Protein GI77460461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.735778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGT TGGTCGTCGA AGATGAAGCG CTGTTGCGCC ATCACCTGCA AACCCGCCTG 
ACGGAGAGCG GTCACGTGGT CGAGTCCGTG GCCAATGCCG AAGAGGCGTT GTACCAGACC
GGGCAATTCA ACTTTGACCT GGCGGTGATC GACCTTGGAC TGCCGGGCAT GAGTGGCCTC
GACCTGATCC GCCAGCTGCG CTCGGGCGGC AAGACGTTTC CGATCCTGAT CCTCACCGCG
CGCGGCAACT GGCAAGACAA GGTCGAAGGT CTGGCAGCCG GGGCTGACGA TTATCTGGTC
AAGCCGTTCC AGTTCGAAGA GCTTGAAGCG CGACTCAATG CCTTGCTGCG CCGCTCCAGC
GGTTTCACCC AGTCGACCAT TGTCGCCGGC CCGCTGTTGC TCGACCTCAA TCGCAAGCAG
GCGACCCTCG ACGAGCAACC GCTGGCGCTG ACCGCCTACG AATACCGGAT TCTCGAATAC
CTCATGCGTC ATCACCAGCA AGTGGTGCCC AAGGATCGGC TGATGGAGCA GCTGTACCCG
GATGACGACG AGCGCGATCC GAACGTGATC GAAGTGCTGG TCGGCCGTCT GCGCCGCAAG
CTCGAAGGCC CGGCCGGATT CAAGCCGATC GACACCGTGC GCGGCCTCGG TTACCTGTTC
AATGAGCGTT GCACTTGA
 
Protein sequence
MKLLVVEDEA LLRHHLQTRL TESGHVVESV ANAEEALYQT GQFNFDLAVI DLGLPGMSGL 
DLIRQLRSGG KTFPILILTA RGNWQDKVEG LAAGADDYLV KPFQFEELEA RLNALLRRSS
GFTQSTIVAG PLLLDLNRKQ ATLDEQPLAL TAYEYRILEY LMRHHQQVVP KDRLMEQLYP
DDDERDPNVI EVLVGRLRRK LEGPAGFKPI DTVRGLGYLF NERCT