Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4240 |
Symbol | |
ID | 3717818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4782576 |
End bp | 4783253 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_349968 |
Protein GI | 77460461 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.735778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGT TGGTCGTCGA AGATGAAGCG CTGTTGCGCC ATCACCTGCA AACCCGCCTG ACGGAGAGCG GTCACGTGGT CGAGTCCGTG GCCAATGCCG AAGAGGCGTT GTACCAGACC GGGCAATTCA ACTTTGACCT GGCGGTGATC GACCTTGGAC TGCCGGGCAT GAGTGGCCTC GACCTGATCC GCCAGCTGCG CTCGGGCGGC AAGACGTTTC CGATCCTGAT CCTCACCGCG CGCGGCAACT GGCAAGACAA GGTCGAAGGT CTGGCAGCCG GGGCTGACGA TTATCTGGTC AAGCCGTTCC AGTTCGAAGA GCTTGAAGCG CGACTCAATG CCTTGCTGCG CCGCTCCAGC GGTTTCACCC AGTCGACCAT TGTCGCCGGC CCGCTGTTGC TCGACCTCAA TCGCAAGCAG GCGACCCTCG ACGAGCAACC GCTGGCGCTG ACCGCCTACG AATACCGGAT TCTCGAATAC CTCATGCGTC ATCACCAGCA AGTGGTGCCC AAGGATCGGC TGATGGAGCA GCTGTACCCG GATGACGACG AGCGCGATCC GAACGTGATC GAAGTGCTGG TCGGCCGTCT GCGCCGCAAG CTCGAAGGCC CGGCCGGATT CAAGCCGATC GACACCGTGC GCGGCCTCGG TTACCTGTTC AATGAGCGTT GCACTTGA
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Protein sequence | MKLLVVEDEA LLRHHLQTRL TESGHVVESV ANAEEALYQT GQFNFDLAVI DLGLPGMSGL DLIRQLRSGG KTFPILILTA RGNWQDKVEG LAAGADDYLV KPFQFEELEA RLNALLRRSS GFTQSTIVAG PLLLDLNRKQ ATLDEQPLAL TAYEYRILEY LMRHHQQVVP KDRLMEQLYP DDDERDPNVI EVLVGRLRRK LEGPAGFKPI DTVRGLGYLF NERCT
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