More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_1367 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_1367  two component transcriptional regulator, winged helix family  100 
 
 
230 aa  466  9.999999999999999e-131  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000177207  n/a   
 
 
-
 
NC_009012  Cthe_1847  two component transcriptional regulator  53.57 
 
 
234 aa  243  1.9999999999999999e-63  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000121968  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  52.44 
 
 
237 aa  237  1e-61  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  53.36 
 
 
236 aa  233  2.0000000000000002e-60  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  52.23 
 
 
231 aa  231  7.000000000000001e-60  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_011898  Ccel_1714  two component transcriptional regulator, winged helix family  51.11 
 
 
234 aa  230  1e-59  Clostridium cellulolyticum H10  Bacteria  normal  0.233786  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  52.47 
 
 
240 aa  230  1e-59  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  51.79 
 
 
231 aa  229  3e-59  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  52.02 
 
 
236 aa  228  7e-59  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_010001  Cphy_2121  two component transcriptional regulator  49.78 
 
 
231 aa  223  1e-57  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  50.66 
 
 
240 aa  217  1e-55  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  51.34 
 
 
227 aa  217  1e-55  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  49.55 
 
 
223 aa  216  2.9999999999999998e-55  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  47.35 
 
 
230 aa  215  5e-55  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  50.89 
 
 
227 aa  214  9.999999999999999e-55  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  49.34 
 
 
237 aa  214  9.999999999999999e-55  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  47.56 
 
 
226 aa  212  2.9999999999999995e-54  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  49.78 
 
 
229 aa  212  2.9999999999999995e-54  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  48.9 
 
 
229 aa  212  2.9999999999999995e-54  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000201285  n/a   
 
 
-
 
NC_010718  Nther_0916  two component transcriptional regulator, winged helix family  47.3 
 
 
234 aa  211  5.999999999999999e-54  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0276045  hitchhiker  9.727110000000001e-18 
 
 
-
 
NC_003909  BCE_1601  DNA-binding response regulator ResD  49.12 
 
 
250 aa  211  7e-54  Bacillus cereus ATCC 10987  Bacteria  normal  0.953648  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  47.09 
 
 
231 aa  211  7e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_011658  BCAH187_A1637  DNA-binding response regulator ResD  49.12 
 
 
250 aa  211  7e-54  Bacillus cereus AH187  Bacteria  normal  0.0246031  n/a   
 
 
-
 
NC_011773  BCAH820_1569  DNA-binding response regulator ResD  49.12 
 
 
250 aa  211  7e-54  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.45334e-32 
 
 
-
 
NC_005945  BAS1386  DNA-binding response regulator ResD  49.12 
 
 
238 aa  211  9e-54  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1359  response regulator  49.12 
 
 
238 aa  211  9e-54  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0319788  n/a   
 
 
-
 
NC_006274  BCZK1358  response regulator  49.12 
 
 
238 aa  211  9e-54  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1497  DNA-binding response regulator ResD  49.12 
 
 
238 aa  211  9e-54  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.862661  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  48.21 
 
 
225 aa  211  9e-54  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3814  DNA-binding response regulator ResD  49.12 
 
 
238 aa  210  1e-53  Bacillus cereus G9842  Bacteria  normal  hitchhiker  3.95849e-16 
 
 
-
 
NC_011725  BCB4264_A1531  DNA-binding response regulator ResD  49.12 
 
 
238 aa  210  1e-53  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  49.34 
 
 
238 aa  210  1e-53  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  46.64 
 
 
228 aa  209  2e-53  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1399  two component transcriptional regulator  49.12 
 
 
238 aa  210  2e-53  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.129694  n/a   
 
 
-
 
NC_008609  Ppro_2228  two component transcriptional regulator  51.35 
 
 
222 aa  210  2e-53  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00319429  n/a   
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  51.33 
 
 
236 aa  209  2e-53  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  48.91 
 
 
230 aa  208  5e-53  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  47.84 
 
 
229 aa  208  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  50.44 
 
 
230 aa  207  8e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  44.93 
 
 
231 aa  207  1e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_009455  DehaBAV1_0937  two component transcriptional regulator  49.55 
 
 
227 aa  207  2e-52  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  46.19 
 
 
228 aa  206  2e-52  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  47.98 
 
 
227 aa  205  4e-52  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_008346  Swol_1681  response regulator receiver protein  50 
 
 
227 aa  205  5e-52  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0956507  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  48.66 
 
 
229 aa  205  5e-52  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  47.37 
 
 
232 aa  204  7e-52  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  48.66 
 
 
226 aa  204  8e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  48.66 
 
 
226 aa  204  1e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  47.11 
 
 
229 aa  204  1e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  47.77 
 
 
231 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  48.66 
 
 
230 aa  203  2e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0969  two component transcriptional regulator  46.29 
 
 
226 aa  203  2e-51  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.165699  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  46.88 
 
 
228 aa  203  2e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_008262  CPR_2327  two-component response regulator  50.22 
 
 
233 aa  203  2e-51  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1215  two component transcriptional regulator, winged helix family  45.98 
 
 
237 aa  203  2e-51  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1104  two component transcriptional regulator, winged helix family  48.44 
 
 
233 aa  203  2e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  47.32 
 
 
226 aa  202  4e-51  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1055  DNA-binding response regulator SrrA  47.58 
 
 
241 aa  201  6e-51  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  48 
 
 
236 aa  201  9e-51  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1549  two component transcriptional regulator  47.14 
 
 
241 aa  201  9.999999999999999e-51  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3061  two component transcriptional regulator  49.55 
 
 
227 aa  201  9.999999999999999e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.799336  n/a   
 
 
-
 
NC_009632  SaurJH1_1580  response regulator receiver  47.14 
 
 
241 aa  201  9.999999999999999e-51  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1261  DNA-binding response regulator  45.06 
 
 
236 aa  200  1.9999999999999998e-50  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000139979  normal 
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  48.65 
 
 
236 aa  199  3.9999999999999996e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0214647 
 
 
-
 
NC_007498  Pcar_0360  two component signal transduction response regulator  46.7 
 
 
224 aa  199  3.9999999999999996e-50  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  47.98 
 
 
230 aa  199  3.9999999999999996e-50  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_002939  GSU3118  DNA-binding response regulator  49.11 
 
 
227 aa  198  5e-50  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008607  Ppro_3691  two component transcriptional regulator  48.25 
 
 
230 aa  198  5e-50  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3674  two component transcriptional regulator  46.55 
 
 
246 aa  198  5e-50  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.027909  normal 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  46.22 
 
 
230 aa  198  6e-50  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_013411  GYMC61_0402  two component transcriptional regulator, winged helix family  48.05 
 
 
241 aa  197  7.999999999999999e-50  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_0264  two component transcriptional regulator  43.78 
 
 
238 aa  198  7.999999999999999e-50  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.392693  n/a   
 
 
-
 
NC_009523  RoseRS_0805  two component transcriptional regulator  48.2 
 
 
229 aa  198  7.999999999999999e-50  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2933  two component transcriptional regulator, winged helix family  47.37 
 
 
233 aa  197  1.0000000000000001e-49  Geobacter lovleyi SZ  Bacteria  normal  0.0164541  n/a   
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  48.65 
 
 
236 aa  197  1.0000000000000001e-49  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  46.22 
 
 
226 aa  196  2.0000000000000003e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1897  two component transcriptional regulator, winged helix family  44.89 
 
 
229 aa  196  2.0000000000000003e-49  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0471  two component transcriptional regulator  46.43 
 
 
226 aa  197  2.0000000000000003e-49  Frankia sp. CcI3  Bacteria  normal  normal  0.734397 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  42.22 
 
 
224 aa  196  2.0000000000000003e-49  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_3292  two component transcriptional regulator  45.81 
 
 
225 aa  196  2.0000000000000003e-49  Geobacter uraniireducens Rf4  Bacteria  normal  0.580789  n/a   
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  44.78 
 
 
231 aa  196  2.0000000000000003e-49  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  46.67 
 
 
237 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  42.42 
 
 
233 aa  196  3e-49  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_011772  BCG9842_B4998  DNA-binding response regulator  43.59 
 
 
237 aa  196  3e-49  Bacillus cereus G9842  Bacteria  normal  0.709524  normal 
 
 
-
 
NC_009523  RoseRS_3737  two component transcriptional regulator  47.79 
 
 
231 aa  196  3e-49  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00273603 
 
 
-
 
NC_011899  Hore_13280  two component transcriptional regulator, winged helix family  48.66 
 
 
227 aa  196  3e-49  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000536961  n/a   
 
 
-
 
NC_011725  BCB4264_A0316  DNA-binding response regulator  43.16 
 
 
237 aa  195  4.0000000000000005e-49  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  43.36 
 
 
231 aa  195  5.000000000000001e-49  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0255  DNA-binding response regulator  43.46 
 
 
237 aa  195  6e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  47.19 
 
 
231 aa  195  6e-49  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  45.06 
 
 
239 aa  194  8.000000000000001e-49  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  45.06 
 
 
239 aa  194  8.000000000000001e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  45.06 
 
 
239 aa  194  8.000000000000001e-49  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  45.06 
 
 
239 aa  194  8.000000000000001e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  45.06 
 
 
239 aa  194  8.000000000000001e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  45.06 
 
 
239 aa  194  8.000000000000001e-49  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  44.98 
 
 
232 aa  194  9e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1176  two component transcriptional regulator  46.4 
 
 
229 aa  194  1e-48  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.149936 
 
 
-
 
NC_010184  BcerKBAB4_0266  two component transcriptional regulator  43.35 
 
 
237 aa  193  1e-48  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.262207  n/a   
 
 
-
 
NC_011898  Ccel_1546  two component transcriptional regulator, winged helix family  43.53 
 
 
237 aa  194  1e-48  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000115937  n/a   
 
 
-
 
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