Gene Tcr_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0969 
Symbol 
ID3761550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1047875 
End bp1048555 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content40% 
IMG OID637785690 
Producttwo component transcriptional regulator 
Protein accessionYP_391238 
Protein GI78485313 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.165699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCG AAACCATCTT AATTGTGGAA GATGAAATTA AAATTGCCAA TATTGTTCAA 
GAGTACTTAC AAGACAGTGG TTTTAAAACC GTGTGCATTG ATAACGGTTC GGACGTTTTG
AGTTGGGTTC AAAACCATCC TGTCGATTTG ATTTTATTGG ATATTATGTT GCCGGGAAAA
GATGGTTTGC AAGTTTGCAA AGAGGTTCGA ACCATAAGCC AGGTACCGAT TATTATGCTA
ACGGCTAAAG TGGAAGAAAT TGATCGGATT TTAGGGTTGG AACTAGGGGC AGATGACTAT
ATTTGTAAGC CGTTCAGTCC ACGAGAATTA GTCGCGCGTG TCAAAGCGTT GCTTCGACGG
AGTTCTTTAC GACAAGAAAA TCACAGTACT GAAGATTGGC ACATGGATGA AGAGCGTTAT
CAAGTCCGCT ATCAAGGAAA AACAGTCAAT TTATCCATGG TTGAGTTTGC GATTTTGAAG
TTGTTGAGTA CCAGTCCCGG GCGCATATAC TCGAGAAGTC ATTTGATTGG GAGCATTTAT
CCTGATAACC GAGTGGTTTC TGATCGCACG GTTGATAGTC ACATTAAAAA GCTGCGGCAT
AAACTGGCCG AAGAATTGAC TTCAAAAGAA TTGATTTATT CCGTTTATGG TGTTGGTTAT
AAGTTTGAGT TTCACACTTA A
 
Protein sequence
MTSETILIVE DEIKIANIVQ EYLQDSGFKT VCIDNGSDVL SWVQNHPVDL ILLDIMLPGK 
DGLQVCKEVR TISQVPIIML TAKVEEIDRI LGLELGADDY ICKPFSPREL VARVKALLRR
SSLRQENHST EDWHMDEERY QVRYQGKTVN LSMVEFAILK LLSTSPGRIY SRSHLIGSIY
PDNRVVSDRT VDSHIKKLRH KLAEELTSKE LIYSVYGVGY KFEFHT