More than 300 homologs were found in PanDaTox collection
for query gene VIBHAR_02626 on replicon NC_009783
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009783  VIBHAR_02626  hypothetical protein  100 
 
 
165 aa  336  9.999999999999999e-92  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003751  response regulator  87.27 
 
 
165 aa  302  2.0000000000000002e-81  Vibrio sp. Ex25  Bacteria  normal  0.562532  n/a   
 
 
-
 
NC_009457  VC0395_A0725  response regulator  67.88 
 
 
165 aa  238  2.9999999999999997e-62  Vibrio cholerae O395  Bacteria  normal  0.836787  n/a   
 
 
-
 
NC_009831  Ssed_3209  putative chemotaxis protein CheY  41.03 
 
 
157 aa  130  1.0000000000000001e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  0.62967  normal 
 
 
-
 
NC_010655  Amuc_0857  response regulator receiver protein  39.1 
 
 
159 aa  119  9.999999999999999e-27  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.60456  normal 
 
 
-
 
NC_013456  VEA_003584  putative chemotaxis protein CheY  35.9 
 
 
157 aa  112  2.0000000000000002e-24  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02545  hypothetical protein  34.62 
 
 
178 aa  108  3e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0934  putative chemotaxis protein CheY  35.26 
 
 
158 aa  108  4.0000000000000004e-23  Vibrio cholerae O395  Bacteria  normal  0.0812215  n/a   
 
 
-
 
NC_008709  Ping_2342  CheY-like chemotaxis protein, response regulator receiver  42.65 
 
 
157 aa  106  2e-22  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0482174 
 
 
-
 
NC_008709  Ping_2340  CheY-like chemotaxis protein, response regulator receiver  40.44 
 
 
158 aa  102  2e-21  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0371017 
 
 
-
 
NC_009457  VC0395_A0726  response regulator  33.54 
 
 
651 aa  89.7  2e-17  Vibrio cholerae O395  Bacteria  hitchhiker  0.000761968  n/a   
 
 
-
 
NC_009783  VIBHAR_02625  hypothetical protein  30.77 
 
 
646 aa  84  0.000000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003750  sensor histidine kinase  29.59 
 
 
646 aa  78.2  0.00000000000005  Vibrio sp. Ex25  Bacteria  normal  0.0232552  n/a   
 
 
-
 
NC_013730  Slin_6098  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  34.19 
 
 
553 aa  72.8  0.000000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4588  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  41.38 
 
 
567 aa  72.4  0.000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1342  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  31.36 
 
 
556 aa  68.6  0.00000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1190  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  36.75 
 
 
560 aa  65.9  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.716725  unclonable  0.0000120152 
 
 
-
 
NC_013037  Dfer_0369  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  30.77 
 
 
567 aa  65.9  0.0000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.106418 
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  38.52 
 
 
317 aa  64.7  0.0000000005  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_008312  Tery_3971  putative GAF sensor protein  35.56 
 
 
312 aa  64.7  0.0000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0406  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulfide oxidoreductase  35.38 
 
 
557 aa  64.3  0.0000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1097  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.45 
 
 
554 aa  62.8  0.000000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1086  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.45 
 
 
554 aa  62.8  0.000000002  Mycobacterium sp. KMS  Bacteria  normal  0.667334  normal  0.027498 
 
 
-
 
NC_008146  Mmcs_1070  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.45 
 
 
554 aa  62.8  0.000000002  Mycobacterium sp. MCS  Bacteria  normal  0.970037  n/a   
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  37.1 
 
 
553 aa  62.4  0.000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0662  response regulator receiver (CheY) and GAF modulated Serine phosphatase  35.54 
 
 
557 aa  61.6  0.000000004  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00161844  normal  0.0426655 
 
 
-
 
NC_008576  Mmc1_2496  two component, sigma54 specific, Fis family transcriptional regulator  27.1 
 
 
495 aa  61.6  0.000000004  Magnetococcus sp. MC-1  Bacteria  normal  0.0534594  normal  0.148721 
 
 
-
 
NC_009921  Franean1_2259  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.17 
 
 
582 aa  61.6  0.000000005  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0983279 
 
 
-
 
NC_008312  Tery_3155  adenylate/guanylate cyclase  36.67 
 
 
1172 aa  61.6  0.000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  0.386213  hitchhiker  0.00095291 
 
 
-
 
NC_013131  Caci_6387  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  33.61 
 
 
565 aa  61.2  0.000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.958979  normal  0.0107564 
 
 
-
 
NC_012918  GM21_2363  response regulator receiver protein  29.5 
 
 
189 aa  61.2  0.000000007  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_1423  response regulator receiver (CheY) and GAF domain-containing protein  38.02 
 
 
315 aa  60.5  0.000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2450  putative two-component response regulator  36.36 
 
 
431 aa  60.1  0.00000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1371  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.45 
 
 
582 aa  60.1  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.858891  normal  0.520575 
 
 
-
 
NC_010814  Glov_1569  response regulator receiver modulated metal dependent phosphohydrolase  33.09 
 
 
452 aa  60.5  0.00000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  29.08 
 
 
439 aa  60.1  0.00000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0966  type II secretion system protein E  29.73 
 
 
746 aa  59.3  0.00000002  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.783688 
 
 
-
 
NC_007517  Gmet_3477  PAS/PAC sensor hybrid histidine kinase  29.93 
 
 
1465 aa  59.3  0.00000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  32.7 
 
 
1180 aa  58.9  0.00000003  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_007517  Gmet_3476  response regulator receiver modulated metal dependent phosphohydrolase  29.2 
 
 
479 aa  58.9  0.00000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  30.65 
 
 
154 aa  58.9  0.00000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_009429  Rsph17025_3364  hydrogenase accessory protein HypB  26.71 
 
 
492 aa  58.2  0.00000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.224656 
 
 
-
 
NC_009338  Mflv_5003  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.91 
 
 
554 aa  58.2  0.00000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4576  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  30.58 
 
 
553 aa  58.5  0.00000004  Burkholderia phymatum STM815  Bacteria  normal  0.494559  normal  0.955166 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  29.92 
 
 
270 aa  58.5  0.00000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_0457  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.9 
 
 
578 aa  58.5  0.00000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.809625  normal  0.293491 
 
 
-
 
NC_012918  GM21_2367  response regulator receiver modulated metal dependent phosphohydrolase  29.56 
 
 
538 aa  58.2  0.00000005  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007958  RPD_1179  sigma-54 factor, interaction region  26.92 
 
 
482 aa  58.2  0.00000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0557788  normal 
 
 
-
 
NC_013595  Sros_2038  pyridine nucleotide-disulphide oxidoreductase  31.97 
 
 
554 aa  58.2  0.00000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0938493  normal 
 
 
-
 
NC_012880  Dd703_2727  response regulator receiver protein  27.54 
 
 
380 aa  57.8  0.00000007  Dickeya dadantii Ech703  Bacteria  normal  0.700678  n/a   
 
 
-
 
NC_013037  Dfer_2388  response regulator receiver protein  32.48 
 
 
154 aa  57.8  0.00000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.319662 
 
 
-
 
NC_013132  Cpin_1315  response regulator receiver sensor signal transduction histidine kinase  31.82 
 
 
365 aa  56.6  0.0000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3241  response regulator  32 
 
 
428 aa  56.6  0.0000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.0406645  n/a   
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  29.88 
 
 
486 aa  56.6  0.0000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal 
 
 
-
 
NC_004347  SO_2541  response regulator  37.61 
 
 
441 aa  56.2  0.0000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  30.66 
 
 
438 aa  56.2  0.0000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1171  two component, sigma54 specific, transcriptional regulator, Fis family  28.79 
 
 
482 aa  56.6  0.0000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  28.48 
 
 
495 aa  56.6  0.0000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  28.37 
 
 
823 aa  56.6  0.0000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3109  two component, sigma54 specific, Fis family transcriptional regulator  29.29 
 
 
493 aa  56.6  0.0000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1766  response regulator receiver domain-containing protein  27.64 
 
 
311 aa  55.8  0.0000002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.143421 
 
 
-
 
NC_013440  Hoch_5144  response regulator receiver protein  32.77 
 
 
150 aa  56.2  0.0000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.495356  normal 
 
 
-
 
NC_008312  Tery_4323  two component LuxR family transcriptional regulator  32.03 
 
 
215 aa  56.2  0.0000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.115662  normal  0.727411 
 
 
-
 
NC_013132  Cpin_1404  response regulator receiver protein  28.47 
 
 
154 aa  55.5  0.0000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  31.36 
 
 
456 aa  55.5  0.0000003  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_013757  Gobs_2253  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  34.07 
 
 
552 aa  55.8  0.0000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.388258  n/a   
 
 
-
 
NC_010725  Mpop_2960  PAS/PAC sensor hybrid histidine kinase  33.61 
 
 
622 aa  55.5  0.0000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  31.25 
 
 
1156 aa  55.5  0.0000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
NC_011757  Mchl_3068  PAS/PAC sensor hybrid histidine kinase  33.61 
 
 
622 aa  55.1  0.0000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.231547  normal 
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  33.06 
 
 
557 aa  55.1  0.0000004  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4051  response regulator receiver modulated diguanylate cyclase  33.33 
 
 
360 aa  55.1  0.0000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.255257  normal  0.825864 
 
 
-
 
NC_010172  Mext_2842  PAS sensor protein  33.61 
 
 
622 aa  55.1  0.0000004  Methylobacterium extorquens PA1  Bacteria  normal  0.174863  normal 
 
 
-
 
NC_010571  Oter_0430  response regulator receiver protein  35.34 
 
 
423 aa  55.1  0.0000004  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal 
 
 
-
 
NC_013440  Hoch_0050  two component, sigma54 specific, transcriptional regulator, Fis family  30.26 
 
 
515 aa  55.1  0.0000004  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0532507 
 
 
-
 
NC_002947  PP_2942  response regulator  31.36 
 
 
456 aa  54.7  0.0000005  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_007204  Psyc_0720  response regulator receiver, fis type  26.71 
 
 
312 aa  54.7  0.0000005  Psychrobacter arcticus 273-4  Bacteria  normal  0.935409  normal 
 
 
-
 
NC_007493  RSP_0507  HupR response regulator  26.76 
 
 
491 aa  54.7  0.0000005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2158  two component, sigma54 specific, Fis family transcriptional regulator  26.76 
 
 
491 aa  55.1  0.0000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00791251  normal  0.142838 
 
 
-
 
NC_007298  Daro_0972  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  27.21 
 
 
994 aa  54.7  0.0000006  Dechloromonas aromatica RCB  Bacteria  normal  0.172335  normal 
 
 
-
 
NC_007925  RPC_3757  two component, sigma54 specific, Fis family transcriptional regulator  24.2 
 
 
499 aa  54.3  0.0000008  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2808  two component, sigma54 specific, Fis family transcriptional regulator  27.01 
 
 
482 aa  53.1  0.000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  28.26 
 
 
806 aa  53.5  0.000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_1161  two component, sigma54 specific, Fis family transcriptional regulator  28.93 
 
 
496 aa  53.5  0.000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.175427  normal 
 
 
-
 
NC_013037  Dfer_2100  response regulator receiver protein  32.26 
 
 
117 aa  53.5  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.515459 
 
 
-
 
NC_009457  VC0395_A0606  response regulator  34.17 
 
 
447 aa  53.5  0.000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03496  response regulator  29.17 
 
 
434 aa  53.5  0.000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3735  signal transduction histidine kinase  28.36 
 
 
1183 aa  53.9  0.000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.709518  normal 
 
 
-
 
NC_013061  Phep_1525  ATP-binding region ATPase domain protein  27.56 
 
 
359 aa  53.5  0.000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.331233  normal  0.636632 
 
 
-
 
NC_009379  Pnuc_2074  two component Fis family transcriptional regulator  33.07 
 
 
227 aa  52.8  0.000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3081  PAS/PAC sensor hybrid histidine kinase  33.05 
 
 
638 aa  52.8  0.000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.0200059 
 
 
-
 
NC_013093  Amir_2371  response regulator receiver protein  30.14 
 
 
382 aa  52.8  0.000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0784161  n/a   
 
 
-
 
NC_011726  PCC8801_1812  two component transcriptional regulator, LuxR family  32.76 
 
 
231 aa  52.8  0.000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009720  Xaut_2184  two component, sigma54 specific, Fis family transcriptional regulator  27.39 
 
 
497 aa  53.1  0.000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.682977  normal  0.229753 
 
 
-
 
NC_013161  Cyan8802_1838  two component transcriptional regulator, LuxR family  32.76 
 
 
231 aa  52.8  0.000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1854  histidine kinase  28.36 
 
 
1111 aa  53.1  0.000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.131557  normal 
 
 
-
 
NC_008709  Ping_3362  sensor histidine kinase  22 
 
 
641 aa  52.4  0.000003  Psychromonas ingrahamii 37  Bacteria  normal  0.610194  normal  0.575745 
 
 
-
 
NC_011729  PCC7424_2955  two component transcriptional regulator, LuxR family  31.03 
 
 
231 aa  52.4  0.000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.800941 
 
 
-
 
NC_007973  Rmet_1542  response regulator receiver domain-containing protein  31.62 
 
 
309 aa  52.4  0.000003  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000150385  normal  0.319028 
 
 
-
 
NC_009664  Krad_2298  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  30.51 
 
 
569 aa  52  0.000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2189  multi-sensor hybrid histidine kinase  33.33 
 
 
628 aa  52  0.000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0671838  normal 
 
 
-
 
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