Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3735 |
Symbol | |
ID | 7289680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 3715279 |
End bp | 3718830 |
Gene Length | 3552 bp |
Protein Length | 1183 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643586709 |
Product | signal transduction histidine kinase |
Protein accession | YP_002484415 |
Protein GI | 220909104 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.709518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGAC CTGCCATTAT CTGCGTTGAT GATGAACCGG CTGTTTTAGC GAGCTTGGCC GTAGAACTCA AGCAGGCGCT GGGGCAGGAG TGCTGGATTG AAACTGCTGT GGGGGGTGAG CAAGCCCTGC GGTTATTTCA GGCGTTGCGG GAACAGGGCT ATGAAATTGC TATCGTTCTG TCTGATTACG GGATGCCAGG ACTGAAGGGC GACGAACTGC TGGCCACCAT TCACAGTCTT TCTCCTCACA CGCTGAATAT CATGCTCAGT GAGCAGGTGG ATCTGGCGGT TGTCAGCAAT GCCCTGCGTC AGGCCAAGCT CTATCGGTAC ATCGCTAAAC CCTGGCAAAC TGAGGATTTA ACCAACTCCG TGCTGGCAGC CCTGCATAGC TTTTTACAGA CTCGCCAGCG AGAGGTGCAA ATTGAGCAAC TGAGCCGGAG AAATCAAGAG CTGCAACAGG AGATCAACAC CCTGGAACAG GCCCAGCAAA CCATTCTGGA GAAGCAGCAA TACTATGAGC AGATCACAGA ATTTAATTCG GCAATTTTCT ACATCTACGA CTTGAATCAG CAGCAGAACG TCTATGTTAA CCACGAACTG ACTAATATTC TGGGTTATTC TACAGCAGAA ATTCAGGCGA TGGGAGCCCA TTTTCTGCCT TCCCTGGTGC ATCCAGAAGA CCTGCCCCGC TTGCTGGCCG GCATGGAACG GTTCAAGCAG ATGGGGGATA CGGAGGTACT GGAAACAGAA TATCGGATCA GAGATGTGCG GGGAGAGTGG CACTGGTTCT ACAGCCGCGA TCGCATTTTT AGCCGTAACC CGGATGGTTC CCCCCGCCAG AGTTTGGGGA CTGCCATGGA CATTACGGCC CAGAAGCGAG CGGAGTTAGA AATTCTGCAG TTGAATAGCC AGCTCGAACA ACGGGTTCAG GCGCGAACTG CTGCCCTGCA GGCTTCCCAA TCCCGCTTTG CCGGCATGGT GGAAATTGCC AGTGATGCCA TTATTTCGAT CGATGCCCAG CAGCGCATTA CTCTGTTTAA CCGCGGGGCC GAGGCGATTT TTGGCTATAC GGCGATGGAA GTGCTCGGTC AACCCCTGGA TCTACTCCTG CCTCAGCGCT ACAGCATCCT GCATAGCCAC TACATTGAGC AATTTGCCCA TTCTTCCCAA CTGTCCCGCC GCATGGGAGA ACGCAGCGAA GTTTATGGTC GGCGGCGAGA TGGCAGTGAA TTTCCGGCAG AGGCTTCAAT TTCTCGTCTA GACCTGGAGG GGGAGTTAGT TTATACCGTT ATCCTGCGGG ATATCAGCGA TCGCAAACAG ATTGAACTCA CCCTGTCCCA ACAGGCGGAA CGGGAGCGAC TGATTGCGGA TATGACCCGT CACATTCACC AATCCCTGGA GCTGGAAACG ATTCTGCGGA CTACAGTCAC GGAAGTGCGC CAACTCTTCC AGGCCGATCG GGTCATGGTC TACCGCTTTT TGCCCGATTG GAGCGGCACG ATTGATGTGG AATCGGTTGT GGAACCCTGG CCAACCGTGC TGGGTTCAAC CCTGAAAGAC CATTGCTTTG CTGAGGGCTA CATCGATCGC TATCGGCAGG GCCGGATTCA ACAGGTGGCT GACATCTTCC AGGCTGGGTT GGCGGATTGT CATGTTGACT TTCTATCCCA TTTTCAGGTG CGGGCTAACC TGGTGGTTCC CATTCTGCAG GACGAGCAAC TCTGGGGACT GCTGATTGCC CAACAGTGTT CTGCCCCCCG GCAGTGGCAA CCCTGGGAAG TCGCCCTCCT GCAACAACTG GCTACCCAGG CCGGGATTGC AATTCAACAA AGTCAGCTTT ATCAGCAAAC CCGACAACAG GCCCAGCGGG AAGAGGCCCT CAATCGGGTG ATCCAGGCGA TCCGTCAGTC CCTTGATCTG AAAACAATCT TTAATACTGC TGCGGCGGAA ATCGGTAAAC TGCTGGGCAT TGATCAGGTG TTCATCGTCC AGTACCTTGC TGAACAAATG GCTTGGGTGC ATGTGGCGCA GTACCGGGCC GATCAGCGCT TGCCGGTGAC GCTGGGATTG AGAATTCCTG AAGCGGATAA TCCCCTATCG GATCGCCTCA AGCAACTGGA GGTTGTGCGA GTCAATACCA CCTTTGATCT GAGTGATCCC ATTAACTCTC AGCTGGCTGA AACCTTTCCC GGTCATTGGC TGCTGGTTCC CCTCAAAGTC AACCAAACCC TCTGGGGCAG CGTTACCCTC ACCCATCACC AGGCAGGGTT TTCCTGGGAC GATACGGAGC TGGATTTACT CTATGCCATC ACCGATCAAT TGGCGATCGC GATTCAACAG AGCCAGCTAT ATGAACGGAC CCGAAAACAG GCCGATCGGG AACAGGCCCT CAATCGGGTG ATGCAATCGA TTCGCCAGAC CCTTGACCTG CAAGCTATTT TTACCACCGC TGTTACCGAA ATTGGTCAAC TCCTCCATGC CGATCGGGCC GAAATTGTCC AGTACCTCCC GGAACAGCGT CTGTGGCAGC ACCTGGCTGA ATATTGCTGC AGCCCGGATT TACCTTCTAC TGTTGGTCTG GAAATTGCCG ATGAGAATAA CCCGTTAGCG GAGCAGTTGA AGCGTCTGCA AATTGTGCGG ATTCAGAATG CCCAGGCTTG TGAAGACCCG ATTAACCGCT CTCTGGCAGA ACGCTTACCC GGTGCCTGGT TGTTGATGCC CCTGCAGGTG AATGGCCAGA TTTGGGGTAG TCTCAGTTTG ATCCGCAATA TGCCGGGACA GGGATGGCAC AGTGAAGAAG TCACCCTGGT CTATACGATG GCAGACCAAC TGGCGATCGC GATTCAACAG GTCAAAGCCT TTGAGCAAAC CCAGCAAGAA CTGCGAGAAC GACAACGGGC GGAAATTGAG CTACAGAATT CCTTGAAAGA GAAAATATCT CTCCTGCAGG AAGTCCACCA CCGGGTTAAG AATAACCTGC AGGTGATTTC CAGCTTATTG CTGCTCCAGT CCCGCCGGGT TGATCATCCT CAGGCCCGTG CCATCCTGGA AGATAGCCAG AACCGGGTGA TGGCCATGTC CCTGGTGCAT CAAAATCTCT ATCAAACCCA CAATTTCGCC CAGGTTGGTT TTGCCGAGTA CGTTCGCACC CTGACGAACT ATCTGTTCCA GAGCTTGAAT GTGCAGTCGG AGCAGGTCAC CCTTCACACA GAGATTGACA GCACGGCGAT TGTTCCCCTG GAAAAGGCCG TTCCCTGCGG TTTGATTCTG AATGAACTGA TTACGAATGC CCTCAAACAC GGATTTTACG CTGAGGATCA ACGGGGGGAT CTCTGGATTA ACCTAGTAGT CAATGATAAT GATAGTTTAA CCCTAAGGGT CGCTAACAAT GGGAACCCTC TGCCTACCAA TTTTAGCCTG GAGAGCAGTG AGTCTCTGGG ATTAAAACTG GTCAAGGTAT TGTCAGAACA GTTAAATGCC ATATTGGAGA TTAACGCGGA GGGGCCGACT GTCTTCAGCA TTACTTTTAA TCCGGCTGCT GATCTGGAGT AA
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Protein sequence | MHRPAIICVD DEPAVLASLA VELKQALGQE CWIETAVGGE QALRLFQALR EQGYEIAIVL SDYGMPGLKG DELLATIHSL SPHTLNIMLS EQVDLAVVSN ALRQAKLYRY IAKPWQTEDL TNSVLAALHS FLQTRQREVQ IEQLSRRNQE LQQEINTLEQ AQQTILEKQQ YYEQITEFNS AIFYIYDLNQ QQNVYVNHEL TNILGYSTAE IQAMGAHFLP SLVHPEDLPR LLAGMERFKQ MGDTEVLETE YRIRDVRGEW HWFYSRDRIF SRNPDGSPRQ SLGTAMDITA QKRAELEILQ LNSQLEQRVQ ARTAALQASQ SRFAGMVEIA SDAIISIDAQ QRITLFNRGA EAIFGYTAME VLGQPLDLLL PQRYSILHSH YIEQFAHSSQ LSRRMGERSE VYGRRRDGSE FPAEASISRL DLEGELVYTV ILRDISDRKQ IELTLSQQAE RERLIADMTR HIHQSLELET ILRTTVTEVR QLFQADRVMV YRFLPDWSGT IDVESVVEPW PTVLGSTLKD HCFAEGYIDR YRQGRIQQVA DIFQAGLADC HVDFLSHFQV RANLVVPILQ DEQLWGLLIA QQCSAPRQWQ PWEVALLQQL ATQAGIAIQQ SQLYQQTRQQ AQREEALNRV IQAIRQSLDL KTIFNTAAAE IGKLLGIDQV FIVQYLAEQM AWVHVAQYRA DQRLPVTLGL RIPEADNPLS DRLKQLEVVR VNTTFDLSDP INSQLAETFP GHWLLVPLKV NQTLWGSVTL THHQAGFSWD DTELDLLYAI TDQLAIAIQQ SQLYERTRKQ ADREQALNRV MQSIRQTLDL QAIFTTAVTE IGQLLHADRA EIVQYLPEQR LWQHLAEYCC SPDLPSTVGL EIADENNPLA EQLKRLQIVR IQNAQACEDP INRSLAERLP GAWLLMPLQV NGQIWGSLSL IRNMPGQGWH SEEVTLVYTM ADQLAIAIQQ VKAFEQTQQE LRERQRAEIE LQNSLKEKIS LLQEVHHRVK NNLQVISSLL LLQSRRVDHP QARAILEDSQ NRVMAMSLVH QNLYQTHNFA QVGFAEYVRT LTNYLFQSLN VQSEQVTLHT EIDSTAIVPL EKAVPCGLIL NELITNALKH GFYAEDQRGD LWINLVVNDN DSLTLRVANN GNPLPTNFSL ESSESLGLKL VKVLSEQLNA ILEINAEGPT VFSITFNPAA DLE
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