Gene Cyan7425_3735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3735 
Symbol 
ID7289680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3715279 
End bp3718830 
Gene Length3552 bp 
Protein Length1183 aa 
Translation table11 
GC content53% 
IMG OID643586709 
Productsignal transduction histidine kinase 
Protein accessionYP_002484415 
Protein GI220909104 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.709518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAC CTGCCATTAT CTGCGTTGAT GATGAACCGG CTGTTTTAGC GAGCTTGGCC 
GTAGAACTCA AGCAGGCGCT GGGGCAGGAG TGCTGGATTG AAACTGCTGT GGGGGGTGAG
CAAGCCCTGC GGTTATTTCA GGCGTTGCGG GAACAGGGCT ATGAAATTGC TATCGTTCTG
TCTGATTACG GGATGCCAGG ACTGAAGGGC GACGAACTGC TGGCCACCAT TCACAGTCTT
TCTCCTCACA CGCTGAATAT CATGCTCAGT GAGCAGGTGG ATCTGGCGGT TGTCAGCAAT
GCCCTGCGTC AGGCCAAGCT CTATCGGTAC ATCGCTAAAC CCTGGCAAAC TGAGGATTTA
ACCAACTCCG TGCTGGCAGC CCTGCATAGC TTTTTACAGA CTCGCCAGCG AGAGGTGCAA
ATTGAGCAAC TGAGCCGGAG AAATCAAGAG CTGCAACAGG AGATCAACAC CCTGGAACAG
GCCCAGCAAA CCATTCTGGA GAAGCAGCAA TACTATGAGC AGATCACAGA ATTTAATTCG
GCAATTTTCT ACATCTACGA CTTGAATCAG CAGCAGAACG TCTATGTTAA CCACGAACTG
ACTAATATTC TGGGTTATTC TACAGCAGAA ATTCAGGCGA TGGGAGCCCA TTTTCTGCCT
TCCCTGGTGC ATCCAGAAGA CCTGCCCCGC TTGCTGGCCG GCATGGAACG GTTCAAGCAG
ATGGGGGATA CGGAGGTACT GGAAACAGAA TATCGGATCA GAGATGTGCG GGGAGAGTGG
CACTGGTTCT ACAGCCGCGA TCGCATTTTT AGCCGTAACC CGGATGGTTC CCCCCGCCAG
AGTTTGGGGA CTGCCATGGA CATTACGGCC CAGAAGCGAG CGGAGTTAGA AATTCTGCAG
TTGAATAGCC AGCTCGAACA ACGGGTTCAG GCGCGAACTG CTGCCCTGCA GGCTTCCCAA
TCCCGCTTTG CCGGCATGGT GGAAATTGCC AGTGATGCCA TTATTTCGAT CGATGCCCAG
CAGCGCATTA CTCTGTTTAA CCGCGGGGCC GAGGCGATTT TTGGCTATAC GGCGATGGAA
GTGCTCGGTC AACCCCTGGA TCTACTCCTG CCTCAGCGCT ACAGCATCCT GCATAGCCAC
TACATTGAGC AATTTGCCCA TTCTTCCCAA CTGTCCCGCC GCATGGGAGA ACGCAGCGAA
GTTTATGGTC GGCGGCGAGA TGGCAGTGAA TTTCCGGCAG AGGCTTCAAT TTCTCGTCTA
GACCTGGAGG GGGAGTTAGT TTATACCGTT ATCCTGCGGG ATATCAGCGA TCGCAAACAG
ATTGAACTCA CCCTGTCCCA ACAGGCGGAA CGGGAGCGAC TGATTGCGGA TATGACCCGT
CACATTCACC AATCCCTGGA GCTGGAAACG ATTCTGCGGA CTACAGTCAC GGAAGTGCGC
CAACTCTTCC AGGCCGATCG GGTCATGGTC TACCGCTTTT TGCCCGATTG GAGCGGCACG
ATTGATGTGG AATCGGTTGT GGAACCCTGG CCAACCGTGC TGGGTTCAAC CCTGAAAGAC
CATTGCTTTG CTGAGGGCTA CATCGATCGC TATCGGCAGG GCCGGATTCA ACAGGTGGCT
GACATCTTCC AGGCTGGGTT GGCGGATTGT CATGTTGACT TTCTATCCCA TTTTCAGGTG
CGGGCTAACC TGGTGGTTCC CATTCTGCAG GACGAGCAAC TCTGGGGACT GCTGATTGCC
CAACAGTGTT CTGCCCCCCG GCAGTGGCAA CCCTGGGAAG TCGCCCTCCT GCAACAACTG
GCTACCCAGG CCGGGATTGC AATTCAACAA AGTCAGCTTT ATCAGCAAAC CCGACAACAG
GCCCAGCGGG AAGAGGCCCT CAATCGGGTG ATCCAGGCGA TCCGTCAGTC CCTTGATCTG
AAAACAATCT TTAATACTGC TGCGGCGGAA ATCGGTAAAC TGCTGGGCAT TGATCAGGTG
TTCATCGTCC AGTACCTTGC TGAACAAATG GCTTGGGTGC ATGTGGCGCA GTACCGGGCC
GATCAGCGCT TGCCGGTGAC GCTGGGATTG AGAATTCCTG AAGCGGATAA TCCCCTATCG
GATCGCCTCA AGCAACTGGA GGTTGTGCGA GTCAATACCA CCTTTGATCT GAGTGATCCC
ATTAACTCTC AGCTGGCTGA AACCTTTCCC GGTCATTGGC TGCTGGTTCC CCTCAAAGTC
AACCAAACCC TCTGGGGCAG CGTTACCCTC ACCCATCACC AGGCAGGGTT TTCCTGGGAC
GATACGGAGC TGGATTTACT CTATGCCATC ACCGATCAAT TGGCGATCGC GATTCAACAG
AGCCAGCTAT ATGAACGGAC CCGAAAACAG GCCGATCGGG AACAGGCCCT CAATCGGGTG
ATGCAATCGA TTCGCCAGAC CCTTGACCTG CAAGCTATTT TTACCACCGC TGTTACCGAA
ATTGGTCAAC TCCTCCATGC CGATCGGGCC GAAATTGTCC AGTACCTCCC GGAACAGCGT
CTGTGGCAGC ACCTGGCTGA ATATTGCTGC AGCCCGGATT TACCTTCTAC TGTTGGTCTG
GAAATTGCCG ATGAGAATAA CCCGTTAGCG GAGCAGTTGA AGCGTCTGCA AATTGTGCGG
ATTCAGAATG CCCAGGCTTG TGAAGACCCG ATTAACCGCT CTCTGGCAGA ACGCTTACCC
GGTGCCTGGT TGTTGATGCC CCTGCAGGTG AATGGCCAGA TTTGGGGTAG TCTCAGTTTG
ATCCGCAATA TGCCGGGACA GGGATGGCAC AGTGAAGAAG TCACCCTGGT CTATACGATG
GCAGACCAAC TGGCGATCGC GATTCAACAG GTCAAAGCCT TTGAGCAAAC CCAGCAAGAA
CTGCGAGAAC GACAACGGGC GGAAATTGAG CTACAGAATT CCTTGAAAGA GAAAATATCT
CTCCTGCAGG AAGTCCACCA CCGGGTTAAG AATAACCTGC AGGTGATTTC CAGCTTATTG
CTGCTCCAGT CCCGCCGGGT TGATCATCCT CAGGCCCGTG CCATCCTGGA AGATAGCCAG
AACCGGGTGA TGGCCATGTC CCTGGTGCAT CAAAATCTCT ATCAAACCCA CAATTTCGCC
CAGGTTGGTT TTGCCGAGTA CGTTCGCACC CTGACGAACT ATCTGTTCCA GAGCTTGAAT
GTGCAGTCGG AGCAGGTCAC CCTTCACACA GAGATTGACA GCACGGCGAT TGTTCCCCTG
GAAAAGGCCG TTCCCTGCGG TTTGATTCTG AATGAACTGA TTACGAATGC CCTCAAACAC
GGATTTTACG CTGAGGATCA ACGGGGGGAT CTCTGGATTA ACCTAGTAGT CAATGATAAT
GATAGTTTAA CCCTAAGGGT CGCTAACAAT GGGAACCCTC TGCCTACCAA TTTTAGCCTG
GAGAGCAGTG AGTCTCTGGG ATTAAAACTG GTCAAGGTAT TGTCAGAACA GTTAAATGCC
ATATTGGAGA TTAACGCGGA GGGGCCGACT GTCTTCAGCA TTACTTTTAA TCCGGCTGCT
GATCTGGAGT AA
 
Protein sequence
MHRPAIICVD DEPAVLASLA VELKQALGQE CWIETAVGGE QALRLFQALR EQGYEIAIVL 
SDYGMPGLKG DELLATIHSL SPHTLNIMLS EQVDLAVVSN ALRQAKLYRY IAKPWQTEDL
TNSVLAALHS FLQTRQREVQ IEQLSRRNQE LQQEINTLEQ AQQTILEKQQ YYEQITEFNS
AIFYIYDLNQ QQNVYVNHEL TNILGYSTAE IQAMGAHFLP SLVHPEDLPR LLAGMERFKQ
MGDTEVLETE YRIRDVRGEW HWFYSRDRIF SRNPDGSPRQ SLGTAMDITA QKRAELEILQ
LNSQLEQRVQ ARTAALQASQ SRFAGMVEIA SDAIISIDAQ QRITLFNRGA EAIFGYTAME
VLGQPLDLLL PQRYSILHSH YIEQFAHSSQ LSRRMGERSE VYGRRRDGSE FPAEASISRL
DLEGELVYTV ILRDISDRKQ IELTLSQQAE RERLIADMTR HIHQSLELET ILRTTVTEVR
QLFQADRVMV YRFLPDWSGT IDVESVVEPW PTVLGSTLKD HCFAEGYIDR YRQGRIQQVA
DIFQAGLADC HVDFLSHFQV RANLVVPILQ DEQLWGLLIA QQCSAPRQWQ PWEVALLQQL
ATQAGIAIQQ SQLYQQTRQQ AQREEALNRV IQAIRQSLDL KTIFNTAAAE IGKLLGIDQV
FIVQYLAEQM AWVHVAQYRA DQRLPVTLGL RIPEADNPLS DRLKQLEVVR VNTTFDLSDP
INSQLAETFP GHWLLVPLKV NQTLWGSVTL THHQAGFSWD DTELDLLYAI TDQLAIAIQQ
SQLYERTRKQ ADREQALNRV MQSIRQTLDL QAIFTTAVTE IGQLLHADRA EIVQYLPEQR
LWQHLAEYCC SPDLPSTVGL EIADENNPLA EQLKRLQIVR IQNAQACEDP INRSLAERLP
GAWLLMPLQV NGQIWGSLSL IRNMPGQGWH SEEVTLVYTM ADQLAIAIQQ VKAFEQTQQE
LRERQRAEIE LQNSLKEKIS LLQEVHHRVK NNLQVISSLL LLQSRRVDHP QARAILEDSQ
NRVMAMSLVH QNLYQTHNFA QVGFAEYVRT LTNYLFQSLN VQSEQVTLHT EIDSTAIVPL
EKAVPCGLIL NELITNALKH GFYAEDQRGD LWINLVVNDN DSLTLRVANN GNPLPTNFSL
ESSESLGLKL VKVLSEQLNA ILEINAEGPT VFSITFNPAA DLE