More than 300 homologs were found in PanDaTox collection
for query gene VIBHAR_02545 on replicon NC_009783
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009783  VIBHAR_02545  hypothetical protein  100 
 
 
178 aa  369  1e-101  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003584  putative chemotaxis protein CheY  90.26 
 
 
157 aa  293  9e-79  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0934  putative chemotaxis protein CheY  70.78 
 
 
158 aa  235  2e-61  Vibrio cholerae O395  Bacteria  normal  0.0812215  n/a   
 
 
-
 
NC_009831  Ssed_3209  putative chemotaxis protein CheY  64.71 
 
 
157 aa  208  3e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  0.62967  normal 
 
 
-
 
NC_010655  Amuc_0857  response regulator receiver protein  53.9 
 
 
159 aa  170  7.999999999999999e-42  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.60456  normal 
 
 
-
 
NC_008709  Ping_2342  CheY-like chemotaxis protein, response regulator receiver  52.29 
 
 
157 aa  169  2e-41  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0482174 
 
 
-
 
NC_008709  Ping_2340  CheY-like chemotaxis protein, response regulator receiver  50.98 
 
 
158 aa  164  4e-40  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0371017 
 
 
-
 
NC_013456  VEA_003751  response regulator  35.26 
 
 
165 aa  112  3e-24  Vibrio sp. Ex25  Bacteria  normal  0.562532  n/a   
 
 
-
 
NC_009457  VC0395_A0725  response regulator  36.6 
 
 
165 aa  112  4.0000000000000004e-24  Vibrio cholerae O395  Bacteria  normal  0.836787  n/a   
 
 
-
 
NC_009783  VIBHAR_02626  hypothetical protein  34.62 
 
 
165 aa  108  3e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  31.94 
 
 
439 aa  73.2  0.000000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1190  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  32.86 
 
 
560 aa  71.2  0.000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.716725  unclonable  0.0000120152 
 
 
-
 
NC_009429  Rsph17025_3364  hydrogenase accessory protein HypB  32.79 
 
 
492 aa  69.3  0.00000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.224656 
 
 
-
 
NC_007493  RSP_0507  HupR response regulator  32.79 
 
 
491 aa  68.6  0.00000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2158  two component, sigma54 specific, Fis family transcriptional regulator  32.79 
 
 
491 aa  68.6  0.00000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00791251  normal  0.142838 
 
 
-
 
NC_008726  Mvan_1371  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  35.38 
 
 
582 aa  68.2  0.00000000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.858891  normal  0.520575 
 
 
-
 
NC_009338  Mflv_5003  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.07 
 
 
554 aa  67.8  0.00000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1342  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  36.44 
 
 
556 aa  67.8  0.00000000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_6098  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  33.85 
 
 
553 aa  67.8  0.00000000008  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1086  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.08 
 
 
554 aa  67.4  0.00000000009  Mycobacterium sp. KMS  Bacteria  normal  0.667334  normal  0.027498 
 
 
-
 
NC_008146  Mmcs_1070  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.08 
 
 
554 aa  67.4  0.00000000009  Mycobacterium sp. MCS  Bacteria  normal  0.970037  n/a   
 
 
-
 
NC_009077  Mjls_1097  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.08 
 
 
554 aa  67.4  0.00000000009  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3735  signal transduction histidine kinase  36.36 
 
 
1183 aa  67  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.709518  normal 
 
 
-
 
NC_010814  Glov_1569  response regulator receiver modulated metal dependent phosphohydrolase  36.15 
 
 
452 aa  67.4  0.0000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2259  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  35.71 
 
 
582 aa  66.6  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0983279 
 
 
-
 
NC_007517  Gmet_3476  response regulator receiver modulated metal dependent phosphohydrolase  30.47 
 
 
479 aa  65.5  0.0000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0457  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.5 
 
 
578 aa  65.9  0.0000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.809625  normal  0.293491 
 
 
-
 
NC_011146  Gbem_0885  response regulator receiver modulated metal dependent phosphohydrolase  30.47 
 
 
324 aa  65.9  0.0000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2012  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
484 aa  65.5  0.0000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6387  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  35.88 
 
 
565 aa  65.5  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.958979  normal  0.0107564 
 
 
-
 
NC_008687  Pden_3109  two component, sigma54 specific, Fis family transcriptional regulator  35.25 
 
 
493 aa  65.5  0.0000000004  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0430  response regulator receiver protein  33.83 
 
 
423 aa  64.7  0.0000000006  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal 
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  38.64 
 
 
495 aa  64.7  0.0000000006  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5144  response regulator receiver protein  26.62 
 
 
150 aa  64.3  0.0000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  0.495356  normal 
 
 
-
 
NC_009720  Xaut_2184  two component, sigma54 specific, Fis family transcriptional regulator  30.77 
 
 
497 aa  63.2  0.000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.682977  normal  0.229753 
 
 
-
 
NC_010505  Mrad2831_2189  multi-sensor hybrid histidine kinase  36.76 
 
 
628 aa  63.2  0.000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0671838  normal 
 
 
-
 
NC_012918  GM21_3375  response regulator receiver modulated metal dependent phosphohydrolase  28.91 
 
 
324 aa  62.8  0.000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_4588  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  33.93 
 
 
567 aa  63.2  0.000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  36.21 
 
 
154 aa  63.5  0.000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  42.86 
 
 
553 aa  63.5  0.000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2721  response regulator receiver protein  33.59 
 
 
188 aa  62.8  0.000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4576  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.63 
 
 
553 aa  62  0.000000004  Burkholderia phymatum STM815  Bacteria  normal  0.494559  normal  0.955166 
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  33.33 
 
 
557 aa  62.4  0.000000004  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2363  response regulator receiver protein  29.69 
 
 
189 aa  61.6  0.000000005  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  33.85 
 
 
473 aa  61.6  0.000000006  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_011675  PHATRDRAFT_45539  diatom response regulator 1  31.78 
 
 
319 aa  61.6  0.000000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_013037  Dfer_0369  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  31.94 
 
 
567 aa  61.2  0.000000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.106418 
 
 
-
 
NC_010581  Bind_1161  two component, sigma54 specific, Fis family transcriptional regulator  35.29 
 
 
496 aa  60.5  0.00000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.175427  normal 
 
 
-
 
NC_013440  Hoch_4051  response regulator receiver modulated diguanylate cyclase  31.2 
 
 
360 aa  60.5  0.00000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.255257  normal  0.825864 
 
 
-
 
NC_009664  Krad_2298  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.04 
 
 
569 aa  60.8  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0406  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulfide oxidoreductase  33.04 
 
 
557 aa  60.1  0.00000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2722  response regulator receiver modulated metal dependent phosphohydrolase  29.77 
 
 
444 aa  60.8  0.00000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03496  response regulator  30.16 
 
 
434 aa  60.5  0.00000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2541  response regulator  33.33 
 
 
441 aa  60.1  0.00000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  31.01 
 
 
317 aa  60.1  0.00000002  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  30.77 
 
 
823 aa  59.7  0.00000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2012  two component, sigma54 specific, Fis family transcriptional regulator  30 
 
 
485 aa  60.1  0.00000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2450  putative two-component response regulator  29.77 
 
 
431 aa  59.3  0.00000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0639  response regulator receiver modulated metal dependent phosphohydrolase  34.62 
 
 
345 aa  59.3  0.00000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2253  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  34.62 
 
 
552 aa  58.9  0.00000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.388258  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2231  response regulator  36.94 
 
 
475 aa  59.3  0.00000003  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  31.82 
 
 
438 aa  58.9  0.00000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2388  response regulator receiver protein  36.73 
 
 
154 aa  58.5  0.00000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.319662 
 
 
-
 
NC_007973  Rmet_1542  response regulator receiver domain-containing protein  36.08 
 
 
309 aa  58.5  0.00000005  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000150385  normal  0.319028 
 
 
-
 
NC_013061  Phep_1529  response regulator receiver  38.94 
 
 
151 aa  58.2  0.00000006  Pedobacter heparinus DSM 2366  Bacteria  normal  0.542106  normal 
 
 
-
 
NC_009457  VC0395_A0605  response regulator  28.33 
 
 
536 aa  57.8  0.00000008  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  40.24 
 
 
1156 aa  57.8  0.00000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
NC_009075  BURPS668_A2314  response regulator  36.04 
 
 
475 aa  57.8  0.00000008  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1662  response regulator  36.04 
 
 
475 aa  57.8  0.00000009  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0599  response regulator  36.04 
 
 
475 aa  57.8  0.00000009  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0711  response regulator  36.04 
 
 
518 aa  57.8  0.00000009  Burkholderia pseudomallei 1710b  Bacteria  normal  0.226782  n/a   
 
 
-
 
NC_008784  BMASAVP1_1716  response regulator  36.04 
 
 
475 aa  57.8  0.00000009  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1923  response regulator  36.04 
 
 
475 aa  57.8  0.00000009  Burkholderia mallei NCTC 10229  Bacteria  normal  0.537818  n/a   
 
 
-
 
NC_002947  PP_2942  response regulator  31.4 
 
 
456 aa  57  0.0000001  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_007413  Ava_0662  response regulator receiver (CheY) and GAF modulated Serine phosphatase  29.93 
 
 
557 aa  57  0.0000001  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00161844  normal  0.0426655 
 
 
-
 
NC_009483  Gura_4027  response regulator receiver modulated metal dependent phosphohydrolase  29.17 
 
 
346 aa  57.4  0.0000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000247639  n/a   
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  38.89 
 
 
1180 aa  57.4  0.0000001  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_008825  Mpe_A2451  response regulator  30.6 
 
 
171 aa  57  0.0000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.258631  normal 
 
 
-
 
NC_010814  Glov_1570  response regulator receiver protein  31.3 
 
 
210 aa  57  0.0000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3582  multi-sensor signal transduction histidine kinase  35.37 
 
 
516 aa  57  0.0000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0103358 
 
 
-
 
NC_011757  Mchl_3068  PAS/PAC sensor hybrid histidine kinase  34.62 
 
 
622 aa  56.2  0.0000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.231547  normal 
 
 
-
 
NC_010172  Mext_2842  PAS sensor protein  34.62 
 
 
622 aa  56.2  0.0000002  Methylobacterium extorquens PA1  Bacteria  normal  0.174863  normal 
 
 
-
 
NC_010725  Mpop_2960  PAS/PAC sensor hybrid histidine kinase  34.62 
 
 
622 aa  57  0.0000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  30.95 
 
 
231 aa  56.2  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  31.9 
 
 
270 aa  56.6  0.0000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A2447  signal transduction protein  32.79 
 
 
965 aa  56.2  0.0000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.936876  normal 
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  30.16 
 
 
486 aa  56.6  0.0000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal 
 
 
-
 
NC_010814  Glov_1895  response regulator receiver protein  29.92 
 
 
185 aa  56.6  0.0000002  Geobacter lovleyi SZ  Bacteria  normal  0.706146  n/a   
 
 
-
 
NC_008312  Tery_3971  putative GAF sensor protein  31.5 
 
 
312 aa  56.2  0.0000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2808  two component, sigma54 specific, Fis family transcriptional regulator  35 
 
 
482 aa  55.8  0.0000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  30.58 
 
 
456 aa  55.8  0.0000003  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_012918  GM21_0653  response regulator receiver modulated metal dependent phosphohydrolase  33.08 
 
 
345 aa  55.8  0.0000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.6785900000000002e-24 
 
 
-
 
NC_009675  Anae109_1854  histidine kinase  30.95 
 
 
1111 aa  55.8  0.0000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.131557  normal 
 
 
-
 
NC_008463  PA14_26830  putative two-component response regulator  27.78 
 
 
303 aa  55.8  0.0000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  27.48 
 
 
806 aa  55.5  0.0000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_1404  response regulator receiver protein  29.17 
 
 
154 aa  55.5  0.0000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1423  response regulator receiver (CheY) and GAF domain-containing protein  34.74 
 
 
315 aa  55.1  0.0000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0615  response regulator  32.43 
 
 
484 aa  55.1  0.0000005  Burkholderia thailandensis E264  Bacteria  normal  0.177724  n/a   
 
 
-
 
NC_007650  BTH_II0731  response regulator  32.5 
 
 
476 aa  55.1  0.0000006  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  30.7 
 
 
470 aa  55.1  0.0000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
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