| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2253 |
|---|
| Symbol | |
|---|
| ID | 8753924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 2341268 |
|---|
| End bp | 2342926 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003409306 |
|---|
| Protein GI | 284990752 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.388258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGAC CCGTGCTGCT CACCGTCGAC GACGACCCGC AGGTCTCCCG CGCCGTCGCC
CGGGACCTGC GCCGTCACTA CGGCGAGGCG TACCGGGTGC TGCGCGCCGG CTCCGGCGCC
GAGGCCCTCG AGGCGCTCCG CGAGCTCAAG CTGCGCGGCG ACCCGGTGGC GGTGCTGCTG
GCCGACCACC GGATGCCGGA GATGAACGGC ATCGAGTTCC TCGAGCGGGC GATGGACCTG
GTCCCGCGGG CCCGCCGTGC GCTGCTCACC GCCTACGCCG ACACCGACGC CGCCATCGCG
GCCATCAACG ACGTCGACGT CGACGCCTAC CTGCTCAAGC CCTGGGACCC GCCCGAGGAG
AAGCTGTACC CCACGGTCGA CGCCATGCTG ACCGCCTGGC ACGAGACCCC CGACCCCGAG
GTGCACGGCG TCAAGCTGGT CGGCCACCGC TGGTCGGCCC CGTCCTTCCG CGCCCGCGAC
CTGCTGGCCC GCAACGCCGT CCCGTACCAC TGGTTCAACG CCGACGAGCC GGACGGACAG
CGGGTCCTCG CCGCCGCCGG CGCCGGTCCG GACGACGTCC CCGTCGTCGT CACCCCGGAC
GCGCGGGTGC TCCGGCACCC GGGCGAGGCC GAGCTCGCCG CCGTCGTCGG GCTGGCCGTC
GACCCGCGGG AGGAGTTCTA CGACTTGGTC GTGGTCGGCG GCGGGCCGGC CGGGCTCGGT
GCCGCGGTCT ACGGCGCGTC CGAGGGCCTG CGCACCGTGC TCGTCGAGCG GGAGGCCACC
GGCGGGCAGG CCGGGCAGAG CAGCCGGATC GAGAACTACC TCGGCTTCCC CGACGGCGTG
TCCGGTGGGC AGCTCGCCGA CCGGGCCCGC CGCCAGGCCG TGAAGTTCGG CGCCGAGCTG
CTGCTGGCCC GGGACGTCGT GACGCTCGAG GCGCACGGGC CCAAGCGGGT GCTCCACCTC
GACGACGGCC GCCGCATCGC CGCGCACGCC GTCGTCCTGG CCACCGGCGT CTCCTACCGC
AGCCTCGGCG TGGACGGCGT GGACGACCTG ACCGGCCGCG GCGTGTACTA CGGGTCGGCG
ATGACCGAGG CCGCCGAGTG CGCCGACAGC GACGTCTACA TCGTGGGCGG GGCCAACTCC
GCGGGCCAGG CGGCGGTGTT CTTCGCCCGG TACGCGCGCT CGGTGTGCCT GCTGGTCCGG
GGGGCCTCGC TGGAGGCCTC CATGTCGGCC TACCTGGTCG AGCAGATCGC CGGCATCGGG
TCGATCTCCG TCCGCACCTG CACCACCGTG GCCGGCGCGC AGGGCGACGG GCACCTCGAG
GCGATCACCG TGGAGGACGC GCGGACCGGC GAGCGGGAGA CGCTGCCGGC CAGCCACCTG
TTCGTCTTCA TCGGCGGCGC GCCGCGCACC GGGTGGCTGG ACGGCGCGGT GGTCCGCGAC
GAGCGCGGGT TCATCCCCAC CGGTCCGGCG CTGCTGCGCG AGGGGCGCCG TCCCGCCGGC
TGGGACGTCG ACCGCGACCC GTACCTGCTG GAGACCAGCC TGCCGGGGGT GTTCGTCGCC
GGCGACGTGC GGGCGGACTC GGTGAAGCGG GTGGCCTCAG CCGTCGGCGA GGGCGCCATG
GCGGTCACCC TCGTGCACCG GTACCTGGAG GAGAGATGA
|
|---|
| Protein sequence | MGRPVLLTVD DDPQVSRAVA RDLRRHYGEA YRVLRAGSGA EALEALRELK LRGDPVAVLL
ADHRMPEMNG IEFLERAMDL VPRARRALLT AYADTDAAIA AINDVDVDAY LLKPWDPPEE
KLYPTVDAML TAWHETPDPE VHGVKLVGHR WSAPSFRARD LLARNAVPYH WFNADEPDGQ
RVLAAAGAGP DDVPVVVTPD ARVLRHPGEA ELAAVVGLAV DPREEFYDLV VVGGGPAGLG
AAVYGASEGL RTVLVEREAT GGQAGQSSRI ENYLGFPDGV SGGQLADRAR RQAVKFGAEL
LLARDVVTLE AHGPKRVLHL DDGRRIAAHA VVLATGVSYR SLGVDGVDDL TGRGVYYGSA
MTEAAECADS DVYIVGGANS AGQAAVFFAR YARSVCLLVR GASLEASMSA YLVEQIAGIG
SISVRTCTTV AGAQGDGHLE AITVEDARTG ERETLPASHL FVFIGGAPRT GWLDGAVVRD
ERGFIPTGPA LLREGRRPAG WDVDRDPYLL ETSLPGVFVA GDVRADSVKR VASAVGEGAM
AVTLVHRYLE ER
|
|---|
| |