More than 300 homologs were found in PanDaTox collection
for query gene Mpe_A2451 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008825  Mpe_A2451  response regulator  100 
 
 		 171 aa  345  2e-94  Methylibium petroleiphilum PM1  Bacteria  normal  0.258631  normal  1 
 
 
-
 
NC_007298  Daro_0969  response regulator receiver  34.22 
 
 		 188 aa  118  4.9999999999999996e-26  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_4550  response regulator receiver domain-containing protein  39.72 
 
 		 451 aa  99.8  2e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.01769  normal  1 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  38.57 
 
 		 456 aa  94.4  7e-19  Pseudomonas putida F1  Bacteria  normal  0.862781  normal  1 
 
 
-
 
NC_002947  PP_2942  response regulator  38.57 
 
 		 456 aa  94.4  8e-19  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_009656  PSPA7_2273  putative two-component response regulator  40.34 
 
 		 304 aa  93.6  1e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.438912  n/a   
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  37.14 
 
 		 438 aa  92.4  3e-18  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_26830  putative two-component response regulator  39.5 
 
 		 303 aa  92.4  3e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010557  BamMC406_5980  response regulator receiver modulated metal dependent phosphohydrolase  36.97 
 
 		 469 aa  90.9  8e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008392  Bamb_6276  response regulator receiver modulated metal dependent phosphohydrolase  36.97 
 
 		 469 aa  90.9  8e-18  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  38.66 
 
 		 473 aa  89.4  2e-17  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  38.66 
 
 		 470 aa  89.7  2e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_1980  response regulator receiver modulated metal dependent phosphohydrolase  37.86 
 
 		 449 aa  89  3e-17  Rhodoferax ferrireducens T118  Bacteria  normal  0.247955  n/a   
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  37.82 
 
 		 472 aa  88.6  3e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  37.82 
 
 		 472 aa  88.6  3e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  0.862183 
 
 
-
 
NC_007912  Sde_3805  response regulator receiver domain-containing protein  32.61 
 
 		 439 aa  86.7  1e-16  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_1569  response regulator receiver modulated metal dependent phosphohydrolase  37.5 
 
 		 452 aa  85.9  2e-16  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_3476  response regulator receiver modulated metal dependent phosphohydrolase  36.36 
 
 		 479 aa  86.3  2e-16  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_1568  response regulator receiver protein  34.25 
 
 		 262 aa  86.7  2e-16  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1716  response regulator  37.5 
 
 		 475 aa  85.1  4e-16  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1662  response regulator  37.5 
 
 		 475 aa  85.1  4e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0711  response regulator  37.5 
 
 		 518 aa  85.1  4e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  0.226782  n/a   
 
 
-
 
NC_008609  Ppro_2721  response regulator receiver protein  33.72 
 
 		 188 aa  85.1  4e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1923  response regulator  37.5 
 
 		 475 aa  85.1  4e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  0.537818  n/a   
 
 
-
 
NC_009075  BURPS668_A2314  response regulator  37.5 
 
 		 475 aa  85.1  4e-16  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A0599  response regulator  37.5 
 
 		 475 aa  85.1  4e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A0606  response regulator  36.61 
 
 		 447 aa  85.1  4e-16  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3375  response regulator receiver modulated metal dependent phosphohydrolase  34.82 
 
 		 324 aa  84.7  5e-16  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007298  Daro_0972  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  34.71 
 
 		 994 aa  84.3  7e-16  Dechloromonas aromatica RCB  Bacteria  normal  0.172335  normal  1 
 
 
-
 
NC_007434  BURPS1710b_0923  response regulator  39.5 
 
 		 481 aa  84.3  7e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A2388  response regulator  39.5 
 
 		 481 aa  84.3  7e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_0757  response regulator/HD domain-containing protein  39.5 
 
 		 481 aa  84.3  7e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_2469  response regulator  39.5 
 
 		 481 aa  84.3  7e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  0.129941  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2689  response regulator  39.5 
 
 		 481 aa  84.3  7e-16  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_0745  response regulator/HD domain-containing protein  39.5 
 
 		 481 aa  84.3  8e-16  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA0261  response regulator  39.5 
 
 		 439 aa  84  9e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007651  BTH_I0615  response regulator  38.66 
 
 		 484 aa  83.6  0.000000000000001  Burkholderia thailandensis E264  Bacteria  normal  0.177724  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2231  response regulator  36.67 
 
 		 475 aa  83.6  0.000000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_3257  response regulator receiver modulated metal dependent phosphohydrolase  36.59 
 
 		 358 aa  83.2  0.000000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0885  response regulator receiver modulated metal dependent phosphohydrolase  34.82 
 
 		 324 aa  83.2  0.000000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0966  type II secretion system protein E  29.93 
 
 		 746 aa  83.2  0.000000000000002  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.783688 
 
 
-
 
NC_010571  Oter_0430  response regulator receiver protein  35.29 
 
 		 423 aa  82.8  0.000000000000002  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  1 
 
 
-
 
NC_010814  Glov_1564  response regulator receiver sensor signal transduction histidine kinase  42.37 
 
 		 395 aa  82.4  0.000000000000003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_3800  response regulator receiver domain-containing protein  39.67 
 
 		 488 aa  82  0.000000000000003  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_4027  response regulator receiver modulated metal dependent phosphohydrolase  33.93 
 
 		 346 aa  81.6  0.000000000000005  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000247639  n/a   
 
 
-
 
NC_012880  Dd703_2727  response regulator receiver protein  37.4 
 
 		 380 aa  81.3  0.000000000000006  Dickeya dadantii Ech703  Bacteria  normal  0.700678  n/a   
 
 
-
 
NC_007650  BTH_II0731  response regulator  35.83 
 
 		 476 aa  81.3  0.000000000000006  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2012  two component, sigma54 specific, Fis family transcriptional regulator  36.67 
 
 		 485 aa  80.9  0.000000000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_1570  response regulator receiver protein  30.91 
 
 		 210 aa  80.9  0.000000000000008  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2363  response regulator receiver protein  34.45 
 
 		 189 aa  80.9  0.000000000000008  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008825  Mpe_A2447  signal transduction protein  35.43 
 
 		 965 aa  80.5  0.00000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.936876  normal  1 
 
 
-
 
NC_008609  Ppro_2722  response regulator receiver modulated metal dependent phosphohydrolase  31.37 
 
 		 444 aa  79.3  0.00000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_3472  response regulator receiver domain-containing protein  31.76 
 
 		 187 aa  79.3  0.00000000000002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_3241  response regulator  31.93 
 
 		 428 aa  79.3  0.00000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  0.0406645  n/a   
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  31.93 
 
 		 439 aa  79.3  0.00000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2450  putative two-component response regulator  40.52 
 
 		 431 aa  78.6  0.00000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_3729  response regulator receiver protein  39.17 
 
 		 323 aa  78.2  0.00000000000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.800159  normal  0.0418103 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  33.06 
 
 		 270 aa  76.6  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  33.33 
 
 		 806 aa  76.3  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008346  Swol_2547  response regulator receiver protein  34.92 
 
 		 395 aa  76.6  0.0000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_2539  response regulator  32.23 
 
 		 658 aa  75.9  0.0000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007493  RSP_0507  HupR response regulator  36.44 
 
 		 491 aa  75.5  0.0000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1538  response regulator receiver modulated diguanylate phosphodiesterase  31.15 
 
 		 563 aa  75.5  0.0000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2367  response regulator receiver modulated metal dependent phosphohydrolase  38.26 
 
 		 538 aa  75.5  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008576  Mmc1_2496  two component, sigma54 specific, Fis family transcriptional regulator  33.9 
 
 		 495 aa  75.9  0.0000000000003  Magnetococcus sp. MC-1  Bacteria  normal  0.0534594  normal  0.148721 
 
 
-
 
NC_009049  Rsph17029_2158  two component, sigma54 specific, Fis family transcriptional regulator  36.44 
 
 		 491 aa  75.5  0.0000000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00791251  normal  0.142838 
 
 
-
 
NC_010717  PXO_01019  Putative signal protein with GGDEF, EAL and two component receiver domains  33.06 
 
 		 549 aa  74.7  0.0000000000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.159296  n/a   
 
 
-
 
NC_010717  PXO_06147  Putative signal protein with GGDEF, EAL and two component receiver domains  33.06 
 
 		 549 aa  74.7  0.0000000000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.0015374  n/a   
 
 
-
 
NC_009429  Rsph17025_3364  hydrogenase accessory protein HypB  33.9 
 
 		 492 aa  74.7  0.0000000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.224656 
 
 
-
 
NC_013422  Hneap_1427  response regulator receiver protein  34.75 
 
 		 311 aa  74.7  0.0000000000005  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  34.45 
 
 		 823 aa  74.7  0.0000000000006  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_2716  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.4 
 
 		 629 aa  74.3  0.0000000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_3060  response regulator receiver  38.33 
 
 		 410 aa  73.9  0.0000000000009  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_2541  response regulator  30.97 
 
 		 441 aa  73.2  0.000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_1895  response regulator receiver protein  32.93 
 
 		 185 aa  73.6  0.000000000001  Geobacter lovleyi SZ  Bacteria  normal  0.706146  n/a   
 
 
-
 
NC_007517  Gmet_1058  two component, sigma54 specific, Fis family transcriptional regulator  33.59 
 
 		 462 aa  73.9  0.000000000001  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0191246 
 
 
-
 
NC_013440  Hoch_0050  two component, sigma54 specific, transcriptional regulator, Fis family  35 
 
 		 515 aa  73.9  0.000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0532507 
 
 
-
 
NC_008609  Ppro_2723  putative PAS/PAC sensor protein  33.88 
 
 		 285 aa  73.6  0.000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1196  response regulator receiver modulated metal dependent phosphohydrolase  37.82 
 
 		 375 aa  73.2  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.318732  n/a   
 
 
-
 
NC_011891  A2cp1_1265  response regulator receiver modulated metal dependent phosphohydrolase  37.82 
 
 		 375 aa  73.2  0.000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.297476  n/a   
 
 
-
 
NC_009675  Anae109_1184  response regulator receiver modulated metal dependent phosphohydrolase  36.97 
 
 		 394 aa  72.8  0.000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.185308 
 
 
-
 
NC_007958  RPD_1179  sigma-54 factor, interaction region  33.33 
 
 		 482 aa  73.2  0.000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0557788  normal  1 
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  36.28 
 
 		 553 aa  72.8  0.000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  33.9 
 
 		 486 aa  72.4  0.000000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal  1 
 
 
-
 
NC_007908  Rfer_1982  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  32 
 
 		 1355 aa  72.4  0.000000000003  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007969  Pcryo_2288  response regulator receiver domain-containing protein  26.56 
 
 		 322 aa  72.4  0.000000000003  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  0.217152 
 
 
-
 
NC_007973  Rmet_1542  response regulator receiver domain-containing protein  33.05 
 
 		 309 aa  72.4  0.000000000003  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000150385  normal  0.319028 
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  38.26 
 
 		 557 aa  72.4  0.000000000003  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2371  response regulator receiver protein  34.96 
 
 		 382 aa  71.6  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0784161  n/a   
 
 
-
 
NC_009656  PSPA7_2645  response regulator  38.82 
 
 		 447 aa  71.6  0.000000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0366662  n/a   
 
 
-
 
NC_008340  Mlg_2012  two component, sigma54 specific, Fis family transcriptional regulator  33.05 
 
 		 484 aa  71.6  0.000000000005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_1912  cyclic nucleotide-binding protein  32.74 
 
 		 590 aa  71.6  0.000000000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0713503  normal  0.243299 
 
 
-
 
NC_002939  GSU0776  sigma-54 dependent DNA-binding response regulator  31.25 
 
 		 465 aa  71.2  0.000000000007  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_3477  PAS/PAC sensor hybrid histidine kinase  33.93 
 
 		 1465 aa  70.9  0.000000000007  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_30830  putative two-component response regulator  37.65 
 
 		 447 aa  70.9  0.000000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0592396  hitchhiker  0.000000000000489784 
 
 
-
 
NC_007204  Psyc_0720  response regulator receiver, fis type  30.36 
 
 		 312 aa  70.9  0.000000000009  Psychrobacter arcticus 273-4  Bacteria  normal  0.935409  normal  1 
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  34.68 
 
 		 317 aa  70.9  0.000000000009  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_008825  Mpe_A2808  two component, sigma54 specific, Fis family transcriptional regulator  33.05 
 
 		 482 aa  70.5  0.00000000001  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0653  response regulator receiver modulated metal dependent phosphohydrolase  30.33 
 
 		 345 aa  70.1  0.00000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.6785900000000002e-24 
 
 
-
 
NC_011146  Gbem_0639  response regulator receiver modulated metal dependent phosphohydrolase  30 
 
 		 345 aa  70.1  0.00000000001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
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