More than 300 homologs were found in PanDaTox collection
for query gene VEA_003584 on replicon NC_013456
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_003584  putative chemotaxis protein CheY  100 
 
 
157 aa  325  2.0000000000000001e-88  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02545  hypothetical protein  90.26 
 
 
178 aa  293  6e-79  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0934  putative chemotaxis protein CheY  71.34 
 
 
158 aa  247  5e-65  Vibrio cholerae O395  Bacteria  normal  0.0812215  n/a   
 
 
-
 
NC_009831  Ssed_3209  putative chemotaxis protein CheY  65.61 
 
 
157 aa  222  1e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.62967  normal 
 
 
-
 
NC_010655  Amuc_0857  response regulator receiver protein  55.41 
 
 
159 aa  185  2e-46  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.60456  normal 
 
 
-
 
NC_008709  Ping_2342  CheY-like chemotaxis protein, response regulator receiver  54.14 
 
 
157 aa  181  5.0000000000000004e-45  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0482174 
 
 
-
 
NC_008709  Ping_2340  CheY-like chemotaxis protein, response regulator receiver  52.87 
 
 
158 aa  176  8e-44  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0371017 
 
 
-
 
NC_013456  VEA_003751  response regulator  40.69 
 
 
165 aa  116  9.999999999999999e-26  Vibrio sp. Ex25  Bacteria  normal  0.562532  n/a   
 
 
-
 
NC_009457  VC0395_A0725  response regulator  39.19 
 
 
165 aa  116  9.999999999999999e-26  Vibrio cholerae O395  Bacteria  normal  0.836787  n/a   
 
 
-
 
NC_009783  VIBHAR_02626  hypothetical protein  35.9 
 
 
165 aa  112  2.0000000000000002e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_0885  response regulator receiver modulated metal dependent phosphohydrolase  32.06 
 
 
324 aa  73.2  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3476  response regulator receiver modulated metal dependent phosphohydrolase  34.85 
 
 
479 aa  69.7  0.00000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3375  response regulator receiver modulated metal dependent phosphohydrolase  30.53 
 
 
324 aa  70.1  0.00000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  33.86 
 
 
439 aa  70.1  0.00000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3364  hydrogenase accessory protein HypB  34.43 
 
 
492 aa  69.3  0.00000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.224656 
 
 
-
 
NC_009049  Rsph17029_2158  two component, sigma54 specific, Fis family transcriptional regulator  34.65 
 
 
491 aa  69.3  0.00000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00791251  normal  0.142838 
 
 
-
 
NC_007493  RSP_0507  HupR response regulator  34.65 
 
 
491 aa  69.3  0.00000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3109  two component, sigma54 specific, Fis family transcriptional regulator  36.07 
 
 
493 aa  69.3  0.00000000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6387  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  38.6 
 
 
565 aa  68.9  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.958979  normal  0.0107564 
 
 
-
 
NC_010814  Glov_1569  response regulator receiver modulated metal dependent phosphohydrolase  33.85 
 
 
452 aa  68.2  0.00000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2231  response regulator  39.37 
 
 
475 aa  68.2  0.00000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1371  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.5 
 
 
582 aa  67.8  0.00000000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.858891  normal  0.520575 
 
 
-
 
NC_006349  BMAA1662  response regulator  39.37 
 
 
475 aa  67.8  0.00000000006  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1716  response regulator  39.37 
 
 
475 aa  67.8  0.00000000006  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0599  response regulator  39.37 
 
 
475 aa  67.8  0.00000000006  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0711  response regulator  39.37 
 
 
518 aa  67.8  0.00000000006  Burkholderia pseudomallei 1710b  Bacteria  normal  0.226782  n/a   
 
 
-
 
NC_008835  BMA10229_1923  response regulator  39.37 
 
 
475 aa  67.8  0.00000000006  Burkholderia mallei NCTC 10229  Bacteria  normal  0.537818  n/a   
 
 
-
 
NC_009338  Mflv_5003  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  36.97 
 
 
554 aa  67.4  0.00000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1190  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  32.14 
 
 
560 aa  67.4  0.00000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.716725  unclonable  0.0000120152 
 
 
-
 
NC_009075  BURPS668_A2314  response regulator  39.37 
 
 
475 aa  67.4  0.00000000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2363  response regulator receiver protein  31.3 
 
 
189 aa  67  0.00000000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  34.96 
 
 
438 aa  67  0.00000000009  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2259  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.82 
 
 
582 aa  66.6  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0983279 
 
 
-
 
NC_009675  Anae109_3582  multi-sensor signal transduction histidine kinase  36.63 
 
 
516 aa  67  0.0000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0103358 
 
 
-
 
NC_013132  Cpin_1342  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  34.48 
 
 
556 aa  66.6  0.0000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1086  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.45 
 
 
554 aa  65.5  0.0000000002  Mycobacterium sp. KMS  Bacteria  normal  0.667334  normal  0.027498 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  37.17 
 
 
473 aa  66.2  0.0000000002  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_008146  Mmcs_1070  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.45 
 
 
554 aa  65.5  0.0000000002  Mycobacterium sp. MCS  Bacteria  normal  0.970037  n/a   
 
 
-
 
NC_009077  Mjls_1097  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.45 
 
 
554 aa  65.5  0.0000000003  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0457  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  35.34 
 
 
578 aa  65.5  0.0000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.809625  normal  0.293491 
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  32.06 
 
 
317 aa  65.5  0.0000000003  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  34.45 
 
 
154 aa  65.1  0.0000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_008609  Ppro_2721  response regulator receiver protein  35.16 
 
 
188 aa  65.1  0.0000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3735  signal transduction histidine kinase  34.13 
 
 
1183 aa  65.1  0.0000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.709518  normal 
 
 
-
 
NC_011138  MADE_03496  response regulator  35.83 
 
 
434 aa  65.1  0.0000000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2012  two component, sigma54 specific, Fis family transcriptional regulator  33.59 
 
 
484 aa  65.1  0.0000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4576  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  33.06 
 
 
553 aa  64.7  0.0000000005  Burkholderia phymatum STM815  Bacteria  normal  0.494559  normal  0.955166 
 
 
-
 
NC_013730  Slin_6098  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  36.21 
 
 
553 aa  64.7  0.0000000005  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4027  response regulator receiver modulated metal dependent phosphohydrolase  29.92 
 
 
346 aa  64.3  0.0000000006  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000247639  n/a   
 
 
-
 
NC_009457  VC0395_A0605  response regulator  29.17 
 
 
536 aa  64.3  0.0000000006  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4588  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  33.04 
 
 
567 aa  64.3  0.0000000007  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  34.65 
 
 
557 aa  64.3  0.0000000007  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0430  response regulator receiver protein  33.08 
 
 
423 aa  62.4  0.000000002  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal 
 
 
-
 
NC_013440  Hoch_5144  response regulator receiver protein  28.68 
 
 
150 aa  62.4  0.000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.495356  normal 
 
 
-
 
NC_010172  Mext_2842  PAS sensor protein  35.43 
 
 
622 aa  62  0.000000003  Methylobacterium extorquens PA1  Bacteria  normal  0.174863  normal 
 
 
-
 
NC_011757  Mchl_3068  PAS/PAC sensor hybrid histidine kinase  35.43 
 
 
622 aa  62  0.000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.231547  normal 
 
 
-
 
NC_010725  Mpop_2960  PAS/PAC sensor hybrid histidine kinase  35.43 
 
 
622 aa  62.4  0.000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0369  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  32.76 
 
 
567 aa  61.2  0.000000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.106418 
 
 
-
 
NC_013440  Hoch_4051  response regulator receiver modulated diguanylate cyclase  31.5 
 
 
360 aa  61.2  0.000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.255257  normal  0.825864 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  31.82 
 
 
270 aa  61.2  0.000000006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009720  Xaut_2184  two component, sigma54 specific, Fis family transcriptional regulator  37.76 
 
 
497 aa  60.8  0.000000007  Xanthobacter autotrophicus Py2  Bacteria  normal  0.682977  normal  0.229753 
 
 
-
 
NC_010814  Glov_1570  response regulator receiver protein  29.85 
 
 
210 aa  60.5  0.000000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2012  two component, sigma54 specific, Fis family transcriptional regulator  32.73 
 
 
485 aa  60.5  0.000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  31.5 
 
 
470 aa  60.5  0.00000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1161  two component, sigma54 specific, Fis family transcriptional regulator  35.29 
 
 
496 aa  59.7  0.00000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.175427  normal 
 
 
-
 
NC_010814  Glov_1895  response regulator receiver protein  32.56 
 
 
185 aa  60.1  0.00000001  Geobacter lovleyi SZ  Bacteria  normal  0.706146  n/a   
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  34.62 
 
 
553 aa  59.7  0.00000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  29.77 
 
 
806 aa  60.1  0.00000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_2189  multi-sensor hybrid histidine kinase  38.02 
 
 
628 aa  59.7  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0671838  normal 
 
 
-
 
NC_002947  PP_2942  response regulator  32.26 
 
 
456 aa  59.3  0.00000002  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_008825  Mpe_A2451  response regulator  33.09 
 
 
171 aa  59.3  0.00000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.258631  normal 
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  32.48 
 
 
495 aa  59.3  0.00000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2723  putative PAS/PAC sensor protein  30.53 
 
 
285 aa  59.3  0.00000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0662  response regulator receiver (CheY) and GAF modulated Serine phosphatase  33.59 
 
 
557 aa  59.3  0.00000002  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00161844  normal  0.0426655 
 
 
-
 
NC_007651  BTH_I0615  response regulator  34.65 
 
 
484 aa  59.3  0.00000002  Burkholderia thailandensis E264  Bacteria  normal  0.177724  n/a   
 
 
-
 
NC_013037  Dfer_2388  response regulator receiver protein  33.6 
 
 
154 aa  59.7  0.00000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.319662 
 
 
-
 
NC_007969  Pcryo_1766  response regulator receiver domain-containing protein  30.4 
 
 
311 aa  58.9  0.00000002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.143421 
 
 
-
 
NC_011675  PHATRDRAFT_45539  diatom response regulator 1  31.5 
 
 
319 aa  59.7  0.00000002  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_014158  Tpau_0406  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulfide oxidoreductase  33.04 
 
 
557 aa  59.7  0.00000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5456  multi-sensor hybrid histidine kinase  34.71 
 
 
641 aa  58.9  0.00000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0579502  n/a   
 
 
-
 
NC_004347  SO_2541  response regulator  34.15 
 
 
441 aa  58.5  0.00000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1423  response regulator receiver (CheY) and GAF domain-containing protein  31.3 
 
 
315 aa  58.5  0.00000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  32.14 
 
 
472 aa  58.9  0.00000003  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
NC_007973  Rmet_1542  response regulator receiver domain-containing protein  30.47 
 
 
309 aa  58.5  0.00000003  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000150385  normal  0.319028 
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  32.14 
 
 
472 aa  58.9  0.00000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2450  putative two-component response regulator  41.67 
 
 
431 aa  58.2  0.00000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5980  response regulator receiver modulated metal dependent phosphohydrolase  31.25 
 
 
469 aa  58.5  0.00000004  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0731  response regulator  34.13 
 
 
476 aa  58.2  0.00000004  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3472  response regulator receiver sensor signal transduction histidine kinase  33.86 
 
 
520 aa  58.5  0.00000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26830  putative two-component response regulator  28.23 
 
 
303 aa  58.2  0.00000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6276  response regulator receiver modulated metal dependent phosphohydrolase  31.25 
 
 
469 aa  58.2  0.00000004  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  31.45 
 
 
456 aa  58.2  0.00000005  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_013132  Cpin_1404  response regulator receiver protein  29.66 
 
 
154 aa  57.4  0.00000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0261  response regulator  34.65 
 
 
439 aa  57.4  0.00000008  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2689  response regulator  34.65 
 
 
481 aa  57  0.00000009  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0757  response regulator/HD domain-containing protein  34.65 
 
 
481 aa  57  0.00000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3556  multi-sensor signal transduction histidine kinase  39.02 
 
 
523 aa  57  0.00000009  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0923  response regulator  34.65 
 
 
481 aa  57  0.00000009  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  30.08 
 
 
486 aa  57  0.00000009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal 
 
 
-
 
NC_009080  BMA10247_2469  response regulator  34.65 
 
 
481 aa  57  0.00000009  Burkholderia mallei NCTC 10247  Bacteria  normal  0.129941  n/a   
 
 
-
 
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