More than 300 homologs were found in PanDaTox collection
for query gene Ping_2340 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_2340  CheY-like chemotaxis protein, response regulator receiver  100 
 
 
158 aa  318  1.9999999999999998e-86  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0371017 
 
 
-
 
NC_008709  Ping_2342  CheY-like chemotaxis protein, response regulator receiver  95.54 
 
 
157 aa  304  3e-82  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0482174 
 
 
-
 
NC_010655  Amuc_0857  response regulator receiver protein  57.32 
 
 
159 aa  179  2e-44  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.60456  normal 
 
 
-
 
NC_013456  VEA_003584  putative chemotaxis protein CheY  52.87 
 
 
157 aa  176  9e-44  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3209  putative chemotaxis protein CheY  52.23 
 
 
157 aa  174  3e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  0.62967  normal 
 
 
-
 
NC_009457  VC0395_A0934  putative chemotaxis protein CheY  50.63 
 
 
158 aa  166  1e-40  Vibrio cholerae O395  Bacteria  normal  0.0812215  n/a   
 
 
-
 
NC_009783  VIBHAR_02545  hypothetical protein  50.98 
 
 
178 aa  164  2.9999999999999998e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0725  response regulator  42.95 
 
 
165 aa  120  9.999999999999999e-27  Vibrio cholerae O395  Bacteria  normal  0.836787  n/a   
 
 
-
 
NC_013456  VEA_003751  response regulator  40.3 
 
 
165 aa  106  1e-22  Vibrio sp. Ex25  Bacteria  normal  0.562532  n/a   
 
 
-
 
NC_009783  VIBHAR_02626  hypothetical protein  40.44 
 
 
165 aa  102  1e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_6387  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  40.16 
 
 
565 aa  77.4  0.00000000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.958979  normal  0.0107564 
 
 
-
 
NC_009077  Mjls_1097  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.93 
 
 
554 aa  75.5  0.0000000000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1371  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  38.79 
 
 
582 aa  75.9  0.0000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.858891  normal  0.520575 
 
 
-
 
NC_008705  Mkms_1086  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.93 
 
 
554 aa  75.5  0.0000000000002  Mycobacterium sp. KMS  Bacteria  normal  0.667334  normal  0.027498 
 
 
-
 
NC_008146  Mmcs_1070  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.93 
 
 
554 aa  75.5  0.0000000000002  Mycobacterium sp. MCS  Bacteria  normal  0.970037  n/a   
 
 
-
 
NC_009338  Mflv_5003  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  38.79 
 
 
554 aa  75.9  0.0000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2839  GAF(s) sensor(s)-containing protein serine phosphatase  35.43 
 
 
557 aa  75.1  0.0000000000004  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0406  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulfide oxidoreductase  39.66 
 
 
557 aa  74.3  0.0000000000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2259  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  36.21 
 
 
582 aa  70.5  0.000000000009  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0983279 
 
 
-
 
NC_013235  Namu_4588  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  36.13 
 
 
567 aa  70.1  0.00000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0662  response regulator receiver (CheY) and GAF modulated Serine phosphatase  31.91 
 
 
557 aa  69.7  0.00000000001  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00161844  normal  0.0426655 
 
 
-
 
NC_007517  Gmet_3477  PAS/PAC sensor hybrid histidine kinase  34.07 
 
 
1465 aa  70.1  0.00000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3971  putative GAF sensor protein  34.04 
 
 
312 aa  69.7  0.00000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  35.61 
 
 
270 aa  70.1  0.00000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_4317  response regulator receiver modulated GAF sensor protein  33.59 
 
 
317 aa  69.3  0.00000000002  'Nostoc azollae' 0708  Bacteria  normal  0.248315  n/a   
 
 
-
 
NC_007413  Ava_1423  response regulator receiver (CheY) and GAF domain-containing protein  33.59 
 
 
315 aa  68.9  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  36.59 
 
 
439 aa  69.3  0.00000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4576  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  34.71 
 
 
553 aa  68.6  0.00000000003  Burkholderia phymatum STM815  Bacteria  normal  0.494559  normal  0.955166 
 
 
-
 
NC_009664  Krad_0457  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  35.34 
 
 
578 aa  68.2  0.00000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.809625  normal  0.293491 
 
 
-
 
NC_013739  Cwoe_1190  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  34.59 
 
 
560 aa  68.2  0.00000000005  Conexibacter woesei DSM 14684  Bacteria  normal  0.716725  unclonable  0.0000120152 
 
 
-
 
NC_007517  Gmet_3476  response regulator receiver modulated metal dependent phosphohydrolase  32.56 
 
 
479 aa  68.2  0.00000000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2012  two component, sigma54 specific, Fis family transcriptional regulator  36.07 
 
 
484 aa  67.8  0.00000000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0369  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  34.62 
 
 
567 aa  67.4  0.00000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.106418 
 
 
-
 
NC_010814  Glov_1568  response regulator receiver protein  36.59 
 
 
262 aa  67  0.0000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3364  hydrogenase accessory protein HypB  36.36 
 
 
492 aa  66.6  0.0000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.224656 
 
 
-
 
NC_011831  Cagg_0862  response regulator receiver protein  33.09 
 
 
293 aa  67  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.747276  normal  0.358 
 
 
-
 
NC_009720  Xaut_2184  two component, sigma54 specific, Fis family transcriptional regulator  35.9 
 
 
497 aa  65.9  0.0000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.682977  normal  0.229753 
 
 
-
 
NC_013730  Slin_6098  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  31.54 
 
 
553 aa  65.9  0.0000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03496  response regulator  33.87 
 
 
434 aa  66.2  0.0000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2723  putative PAS/PAC sensor protein  35.11 
 
 
285 aa  66.2  0.0000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1569  response regulator receiver modulated metal dependent phosphohydrolase  33.59 
 
 
452 aa  65.5  0.0000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1980  response regulator receiver modulated metal dependent phosphohydrolase  33.59 
 
 
449 aa  65.5  0.0000000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.247955  n/a   
 
 
-
 
NC_009049  Rsph17029_2158  two component, sigma54 specific, Fis family transcriptional regulator  35.54 
 
 
491 aa  64.3  0.0000000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00791251  normal  0.142838 
 
 
-
 
NC_007493  RSP_0507  HupR response regulator  35.54 
 
 
491 aa  64.3  0.0000000006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2298  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  32.76 
 
 
569 aa  63.9  0.0000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2038  pyridine nucleotide-disulphide oxidoreductase  33.88 
 
 
554 aa  63.5  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0938493  normal 
 
 
-
 
NC_013037  Dfer_2388  response regulator receiver protein  37.1 
 
 
154 aa  63.5  0.000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.319662 
 
 
-
 
NC_008312  Tery_4817  response regulator receiver modulated serine phosphatase with GAF sensor  32.84 
 
 
553 aa  63.5  0.000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2253  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  34.62 
 
 
552 aa  62.4  0.000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.388258  n/a   
 
 
-
 
NC_008687  Pden_3109  two component, sigma54 specific, Fis family transcriptional regulator  34.71 
 
 
493 aa  62.4  0.000000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2955  two component transcriptional regulator, LuxR family  34.38 
 
 
231 aa  62  0.000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.800941 
 
 
-
 
NC_008255  CHU_2793  two-component response regulator  30.6 
 
 
154 aa  62  0.000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0292911 
 
 
-
 
NC_004347  SO_2541  response regulator  34.17 
 
 
441 aa  61.6  0.000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0606  response regulator  32.56 
 
 
447 aa  61.6  0.000000004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_4102  two component, sigma54 specific, Fis family transcriptional regulator  34.19 
 
 
475 aa  61.6  0.000000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1342  response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase  34.48 
 
 
556 aa  61.6  0.000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  34.13 
 
 
473 aa  61.2  0.000000005  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_011146  Gbem_0885  response regulator receiver modulated metal dependent phosphohydrolase  32.33 
 
 
324 aa  61.2  0.000000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0970  response regulator receiver  32.82 
 
 
438 aa  61.2  0.000000006  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2094  response regulator  28.79 
 
 
329 aa  60.8  0.000000007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1812  two component transcriptional regulator, LuxR family  34.68 
 
 
231 aa  60.8  0.000000007  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1838  two component transcriptional regulator, LuxR family  34.68 
 
 
231 aa  60.8  0.000000007  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3155  adenylate/guanylate cyclase  33.6 
 
 
1172 aa  60.8  0.000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  0.386213  hitchhiker  0.00095291 
 
 
-
 
NC_013440  Hoch_5144  response regulator receiver protein  27.21 
 
 
150 aa  60.1  0.00000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.495356  normal 
 
 
-
 
NC_007298  Daro_0972  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  36.07 
 
 
994 aa  59.3  0.00000002  Dechloromonas aromatica RCB  Bacteria  normal  0.172335  normal 
 
 
-
 
NC_013440  Hoch_4051  response regulator receiver modulated diguanylate cyclase  32.56 
 
 
360 aa  59.3  0.00000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.255257  normal  0.825864 
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  33.33 
 
 
470 aa  58.9  0.00000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3800  response regulator receiver domain-containing protein  31.43 
 
 
488 aa  58.9  0.00000002  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1766  response regulator receiver domain-containing protein  31.5 
 
 
311 aa  59.3  0.00000002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.143421 
 
 
-
 
NC_008463  PA14_26830  putative two-component response regulator  27.97 
 
 
303 aa  59.3  0.00000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1956  two component, sigma54 specific, Fis family transcriptional regulator  29.05 
 
 
486 aa  58.9  0.00000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.696783  normal 
 
 
-
 
NC_009078  BURPS1106A_A2231  response regulator  35.94 
 
 
475 aa  58.9  0.00000003  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2364  response regulator receiver protein  28.46 
 
 
806 aa  58.5  0.00000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007492  Pfl01_4550  response regulator receiver domain-containing protein  29.13 
 
 
451 aa  57.8  0.00000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.01769  normal 
 
 
-
 
NC_010814  Glov_2289  response regulator receiver protein  27.13 
 
 
135 aa  57.8  0.00000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  31.11 
 
 
1180 aa  57.8  0.00000006  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_012918  GM21_3375  response regulator receiver modulated metal dependent phosphohydrolase  30.83 
 
 
324 aa  57.8  0.00000006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007435  BURPS1710b_A0711  response regulator  35.16 
 
 
518 aa  57.4  0.00000007  Burkholderia pseudomallei 1710b  Bacteria  normal  0.226782  n/a   
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  33.59 
 
 
472 aa  57.4  0.00000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2314  response regulator  35.16 
 
 
475 aa  57.4  0.00000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  33.59 
 
 
472 aa  57.4  0.00000007  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
NC_006349  BMAA1662  response regulator  35.16 
 
 
475 aa  57.4  0.00000008  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1923  response regulator  35.16 
 
 
475 aa  57.4  0.00000008  Burkholderia mallei NCTC 10229  Bacteria  normal  0.537818  n/a   
 
 
-
 
NC_008784  BMASAVP1_1716  response regulator  35.16 
 
 
475 aa  57.4  0.00000008  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0599  response regulator  35.16 
 
 
475 aa  57.4  0.00000008  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1538  response regulator receiver modulated diguanylate phosphodiesterase  29.92 
 
 
563 aa  57.4  0.00000008  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0430  response regulator receiver protein  31.25 
 
 
423 aa  56.6  0.0000001  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal 
 
 
-
 
NC_010557  BamMC406_5980  response regulator receiver modulated metal dependent phosphohydrolase  31.75 
 
 
469 aa  57  0.0000001  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0605  response regulator  30.71 
 
 
536 aa  56.6  0.0000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6276  response regulator receiver modulated metal dependent phosphohydrolase  31.75 
 
 
469 aa  57  0.0000001  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2942  response regulator  27.61 
 
 
456 aa  56.2  0.0000002  Pseudomonas putida KT2440  Bacteria  normal  0.714666  normal  0.271158 
 
 
-
 
NC_012880  Dd703_2726  putative signal transduction protein  33.07 
 
 
365 aa  55.8  0.0000002  Dickeya dadantii Ech703  Bacteria  normal  0.279031  n/a   
 
 
-
 
NC_007298  Daro_3962  two component, sigma54 specific, Fis family transcriptional regulator  31.15 
 
 
495 aa  56.2  0.0000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  30.95 
 
 
231 aa  55.8  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal 
 
 
-
 
NC_009512  Pput_2745  response regulator receiver protein  27.61 
 
 
456 aa  56.2  0.0000002  Pseudomonas putida F1  Bacteria  normal  0.862781  normal 
 
 
-
 
NC_012918  GM21_2363  response regulator receiver protein  29.1 
 
 
189 aa  56.2  0.0000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_3472  response regulator receiver domain-containing protein  30.6 
 
 
187 aa  56.2  0.0000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3473  response regulator receiver domain-containing protein  29.01 
 
 
823 aa  55.8  0.0000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_3257  response regulator receiver modulated metal dependent phosphohydrolase  33.08 
 
 
358 aa  55.8  0.0000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  31.11 
 
 
1156 aa  55.1  0.0000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
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