| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6098 |
|---|
| Symbol | |
|---|
| ID | 8729879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7394544 |
|---|
| End bp | 7396205 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | response regulator receiver modulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003390859 |
|---|
| Protein GI | 284040929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC CCATCATTTT TTCCATTGAC GACGATCCGC AGGTATTGCA GGCCATTCAG
CACGATTTGC GCCAGCAGTA CCGGAAAAAG TACCGGATCA TCTGTACGAG TTCATCGCAG
GAGGCACTCG CTACGCTGCC CGAACTAAAG AAGAAAGGGG AGGAGGTGGC CCTGTTTTTG
TCAGATCAGC GCATGCCGAC TATGACGGGC GTTGAGTTTC TGATGCAGGC CCGGCAACTG
TTCCCCAATG CCAAACGCGT GTTGCTGACG GCCTATTCGG ACATTGATGC CGCCGTTCGG
GCCATCAACG AAGTACAGCT GGATTATTAC ATTGCCAAGC CCTGGGATCC GCCCGAAGAA
AAGCTGTATC CCGTTCTGGA AGACTTGCTG AGCGACTGGC AATCGAACTA TCGACCGCCC
TTTGAGGGGC TTAAGCTGAT TGGTTATCAG TTTTCACCCC GTTCGCACGA GTTAAAGGAT
TTTCTGGCGG GTAACCTGTT TCCTTATCAA TGGCTCGACA TTGAAAGTGA CCCGACGGCA
CAGGAAATGC TCGAACTGCA TGGCCTGAAA ACGACCGATC TGCCCGCGAT CATACTCGGC
GATGGCTCCG CGCTTACCCA GCCTTCACTA GCCGATCTGG GCGGAAAGCT GGGTTTGCAA
CCCAAAGCCA CGCAGGGACT GTATGACCTG GCGATCATTG GTGCCGGTCC CGCCGGTCTG
GCCGCTGCCG TATATGGCGG GTCGGAAGGG CTGAAAACCA TCCTGATCGA CAAACGGGCT
CCCGGCGGGC AGGCGGGCAC CAGTTCACGT ATTGAAAACT ACCTGGGCTT CCCCAACGGC
CTGAGCGGTG CCGACCTTAC CCGGCGGGCT ATTACCCAGG CACAACGTTT TGGTGTGGAG
TTTCTGGCCC CCCAAGAGGT AATGTCGATT ACATCGCAGG GGCAATACAA ACACATTCGG
CTAGGCGATG GGAATGAGGT GGTGGCGCGG TCCATTATTT TGAGCACCGG CGTATCGTAC
CATCAGTTAG ACAACGAGAG TCTGCATAAA TACACGGGGG CGGGTGTGTA CTACGGAGCT
GCCACAACGG AAGCCTTTGC CTTCAAAGGG AAGCCCGTTT ACATTGTTGG GGGCGGCAAC
TCGGCCGGGC AAGGGGCCAT GTACTTATCC CGAACAGCCT CCGAAGTGTT CATCTGTGTT
CGTCGCCCCG ACCTGTCCGA AACGATGTCG CAATACCTGA TCGACCAGAT TGCCCAAACA
CCTAACATTA CTGTACTCGG CTGTACGGAA GTGGTGGAAG GCCTTGGCAA TGAGCGACTT
GAATGCTTGG TGCTGGAAAA CATGGATACG AAAGAACGGC AGACGGTAAA AGCCGCCGGG
CTTTTCATCT TTATCGGTAC CAAGCCCCTG ACAGACTGGA TCGAGATGGA CATCATCAAA
GACCCCAAAG GATTTATTGC CACCGGCCGC GACCTGGCCA AGTACGCTGA TTTTAAGAAA
GTCTGGCGTT ATAGCCGTGA GCCATTCTCC CTCGAAACCT GTAGCGCGGG CATTTTTGCC
GCTGGCGACG TACGGGCGGG TGCCATGAAC CGGGTGGCCT CGGCCGTGGG TGAAGGCGCT
ATGGCCGTAA GTTTTGTCCA TAAATATTTA GCAGAAAACT AG
|
|---|
| Protein sequence | MKLPIIFSID DDPQVLQAIQ HDLRQQYRKK YRIICTSSSQ EALATLPELK KKGEEVALFL
SDQRMPTMTG VEFLMQARQL FPNAKRVLLT AYSDIDAAVR AINEVQLDYY IAKPWDPPEE
KLYPVLEDLL SDWQSNYRPP FEGLKLIGYQ FSPRSHELKD FLAGNLFPYQ WLDIESDPTA
QEMLELHGLK TTDLPAIILG DGSALTQPSL ADLGGKLGLQ PKATQGLYDL AIIGAGPAGL
AAAVYGGSEG LKTILIDKRA PGGQAGTSSR IENYLGFPNG LSGADLTRRA ITQAQRFGVE
FLAPQEVMSI TSQGQYKHIR LGDGNEVVAR SIILSTGVSY HQLDNESLHK YTGAGVYYGA
ATTEAFAFKG KPVYIVGGGN SAGQGAMYLS RTASEVFICV RRPDLSETMS QYLIDQIAQT
PNITVLGCTE VVEGLGNERL ECLVLENMDT KERQTVKAAG LFIFIGTKPL TDWIEMDIIK
DPKGFIATGR DLAKYADFKK VWRYSREPFS LETCSAGIFA AGDVRAGAMN RVASAVGEGA
MAVSFVHKYL AEN
|
|---|
| |